Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G079600 Gossypium hirsutum HOM05D013261 ORTHO05D022803 4.9e-66 254.2 120 100.0
Gorai.001G090700 Gossypium raimondii HOM05D013261 ORTHO05D022803 2.8e-61 238.4 120 94.2
Gohir.D07G084900 Gossypium hirsutum HOM05D013261 ORTHO05D022803 1.8e-60 235.7 120 93.3
Gohir.D07G084950 Gossypium hirsutum HOM05D013261 ORTHO05D022803 1.2e-56 223.0 120 89.2
Gorai.001G090800 Gossypium raimondii HOM05D013261 ORTHO05D022803 4.6e-56 221.1 120 87.5
Thecc.04G102400 Theobroma cacao HOM05D013261 ORTHO05D022803 6.3e-37 157.5 120 64.2
Thecc.04G102500 Theobroma cacao HOM05D013261 ORTHO05D010379 4.4e-14 81.6 112 38.4
COL.COLO4_04719 Corchorus olitorius HOM05D013261 ORTHO05D010379 8.3e-13 77.4 61 55.7
Duzib211G0483 Durio zibethinus HOM05D013261 ORTHO05D010379 3.1e-12 75.5 53 60.4
Gohir.D07G084800 Gossypium hirsutum HOM05D013261 ORTHO05D010379 1.0e-10 70.5 43 67.4
Gorai.001G090600 Gossypium raimondii HOM05D013261 ORTHO05D010379 1.0e-10 70.5 43 67.4
Gohir.A07G079500 Gossypium hirsutum HOM05D010262 ORTHO05D010379 3.8e-10 68.6 43 65.1
Thecc.04G102300 Theobroma cacao HOM05D016410 ORTHO05D010379 3.3e-09 65.5 40 65.0
COL.COLO4_04717 Corchorus olitorius HOM05D016410 ORTHO05D010379 1.2e-08 63.5 40 62.5
Manes.01G102200 Manihot esculenta HOM05D013261 ORTHO05D010379 1.8e-07 59.7 40 57.5
Potri.017G098100 Populus trichocarpa HOM05D010262 ORTHO05D010379 1.8e-07 59.7 106 35.8
Potri.017G095700 Populus trichocarpa HOM05D010262 ORTHO05D010379 2.3e-07 59.3 106 35.8
Potri.017G096300 Populus trichocarpa HOM05D010262 ORTHO05D010379 2.3e-07 59.3 106 35.8
Gohir.A07G079700 Gossypium hirsutum HOM05D016410 ORTHO05D010379 5.2e-07 58.2 43 51.2
Gohir.D07G085000 Gossypium hirsutum HOM05D016410 ORTHO05D010379 5.2e-07 58.2 43 51.2
Gorai.001G090900 Gossypium raimondii HOM05D016410 ORTHO05D010379 5.2e-07 58.2 43 51.2
Potri.017G098300 Populus trichocarpa HOM05D010262 ORTHO05D010379 8.9e-07 57.4 44 50.0
SabraUnG0001200 Salix brachista HOM05D010262 ORTHO05D010379 1.5e-06 56.6 39 56.4
SabraUnG0001500 Salix brachista HOM05D010262 ORTHO05D010379 1.5e-06 56.6 39 56.4
QL02p066431 Quercus lobata HOM05D010262 ORTHO05D010379 3.4e-06 55.5 119 31.9
QL02p066467 Quercus lobata HOM05D010262 ORTHO05D010379 3.4e-06 55.5 119 31.9
Ciclev10013129m.g Citrus clementina HOM05D010262 ORTHO05D010379 4.4e-06 55.1 44 52.3
Cfa021135 Carpinus fangiana HOM05D010262 ORTHO05D010379 5.7e-06 54.7 35 57.1
Sabra17G0084700 Salix brachista HOM05D010262 ORTHO05D010379 5.7e-06 54.7 39 48.7
Nitab4.5_0000212g0330 Nicotiana tabacum HOM05D020746 ORTHO05D023001 7.5e-06 54.3 39 53.8


User provided reference genes

Program Settings