Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G046600 Gossypium hirsutum HOM05D002266 ORTHO05D010337 7.1e-240 833.6 433 100.0
Gorai.001G054000 Gossypium raimondii HOM05D002266 ORTHO05D010337 6.0e-231 803.9 433 96.8
Gohir.D07G050900 Gossypium hirsutum HOM05D002266 ORTHO05D010337 1.8e-230 802.4 433 96.5
Duzib205G1981 Durio zibethinus HOM05D002266 ORTHO05D010337 1.0e-174 617.1 437 75.7
Thecc.03G141000 Theobroma cacao HOM05D002266 ORTHO05D010337 2.9e-156 555.8 431 68.7
COL.COLO4_37262 Corchorus olitorius HOM05D002266 ORTHO05D010337 1.4e-118 430.6 326 71.5
Manes.14G044300 Manihot esculenta HOM05D002266 ORTHO05D010337 1.2e-106 391.0 424 54.0
Hma1.2p1_0452F.1_g155980 Hydrangea macrophylla HOM05D002266 ORTHO05D010337 9.7e-104 381.3 429 51.5
TWI23G1291 Tripterygium wilfordii HOM05D002266 ORTHO05D010337 1.4e-102 377.5 426 50.9
Lj5C86T8 Lonicera japonica HOM05D002266 ORTHO05D010337 7.4e-96 355.1 424 50.7
Atru.chr6.1922 Acer truncatum HOM05D002266 ORTHO05D010337 4.8e-95 352.4 436 50.5
Atru.chr6.1924 Acer truncatum HOM05D002266 ORTHO05D010337 4.8e-95 352.4 436 50.5
Rhsim08G0198000 Rhododendron simsii HOM05D002266 ORTHO05D010337 1.4e-91 340.9 465 44.1
Ciclev10033782m.g Citrus clementina HOM05D002266 ORTHO05D010337 7.9e-90 335.1 432 47.0
Sabra12G0079800 Salix brachista HOM05D002266 ORTHO05D010337 1.1e-88 331.3 429 45.2
Potri.012G108900 Populus trichocarpa HOM05D002266 ORTHO05D010337 9.1e-86 321.6 417 45.1
AT5G61865 Arabidopsis thaliana HOM05D002266 ORTHO05D010337 8.2e-79 298.5 414 44.0
QL10p000420 Quercus lobata HOM05D002266 ORTHO05D010337 9.1e-78 295.0 420 44.5
Cc04_g05840 Coffea canephora HOM05D002266 ORTHO05D010337 5.9e-77 292.4 419 44.4
Prupe.5G140800 Prunus persica HOM05D002266 ORTHO05D010337 2.2e-76 290.4 432 42.1
DCAR_025647 Daucus carota HOM05D002266 ORTHO05D010337 6.5e-76 288.9 433 40.4
AL8G38630 Arabidopsis lyrata HOM05D002266 ORTHO05D010337 2.5e-75 287.0 415 42.2
CARHR275630 Cardamine hirsuta HOM05D002266 ORTHO05D010337 1.6e-74 284.3 414 41.5
Thhalv10005642m.g Eutrema salsugineum HOM05D002266 ORTHO05D010337 4.7e-74 282.7 409 40.6
BcaC01g02442 Brassica carinata HOM05D002266 ORTHO05D010337 8.8e-73 278.5 414 42.3
C03p65250 Brassica napus HOM05D002266 ORTHO05D010337 8.8e-73 278.5 414 42.3
BolC3t18778H Brassica oleracea HOM05D002266 ORTHO05D010337 8.8e-73 278.5 414 42.3
Carub.0008s2256 Capsella rubella HOM05D002266 ORTHO05D010337 8.8e-73 278.5 410 40.7
Sp2g25060 Schrenkiella parvula HOM05D002266 ORTHO05D010337 8.8e-73 278.5 407 41.5
Migut.D01181 Erythranthe guttata HOM05D002266 ORTHO05D010337 1.2e-72 278.1 424 42.7
BcaB02g09608 Brassica carinata HOM05D002266 ORTHO05D010337 1.5e-72 277.7 415 42.2
HanXRQChr05g0155381 Helianthus annuus HOM05D002266 ORTHO05D010337 2.0e-72 277.3 418 43.1
BraA06t25800Z Brassica rapa HOM05D002266 ORTHO05D010337 9.8e-72 275.0 417 42.0
A06p28540 Brassica napus HOM05D002266 ORTHO05D010337 6.3e-71 272.3 415 41.9
RcHm_v2.0_Chr7g0188601 Rosa chinensis HOM05D002266 ORTHO05D010337 9.1e-70 268.5 411 41.4
Nitab4.5_0008403g0020 Nicotiana tabacum HOM05D002266 ORTHO05D010337 7.7e-69 265.4 416 42.3
Solyc12g042340.2 Solanum lycopersicum HOM05D002266 ORTHO05D010337 7.7e-69 265.4 429 42.0
Nitab4.5_0002584g0010 Nicotiana tabacum HOM05D002266 ORTHO05D010337 2.5e-67 260.4 433 42.3
THA.LOC104818284 Tarenaya hassleriana HOM05D002266 ORTHO05D010337 9.4e-67 258.5 413 41.2
Peaxi162Scf00135g01413 Petunia axillaris HOM05D002266 ORTHO05D010337 1.2e-66 258.1 415 41.2
MD14G1146800 Malus domestica HOM05D002266 ORTHO05D010337 4.7e-66 256.1 380 41.8
Sopen12g021270 Solanum pennellii HOM05D002266 ORTHO05D010337 1.0e-65 255.0 354 44.9
SGA_v2.0_scaffold74G24650 Striga asiatica HOM05D002266 ORTHO05D010337 1.4e-65 254.6 414 37.9
FvH4_5g09640 Fragaria vesca HOM05D002266 ORTHO05D010337 8.8e-65 251.9 402 41.8
FAN04G1258 Fragaria x ananassa HOM05D002266 ORTHO05D010337 5.7e-64 249.2 402 41.0
Aa31LG11G1630 Aethionema arabicum HOM05D002266 ORTHO05D010337 3.1e-62 243.4 421 39.0
Aqoxy3G02681 Aquilegia oxysepala HOM05D002266 ORTHO05D010337 3.1e-62 243.4 430 36.5
Oeu013660.2 Olea europaea HOM05D002266 ORTHO05D010337 6.6e-60 235.7 368 42.1
Cpa.g.sc13.178 Carica papaya HOM05D002266 ORTHO05D010337 2.5e-59 233.8 252 54.0
Actinidia25516 Actinidia chinensis HOM05D002266 ORTHO05D010337 3.6e-58 229.9 327 41.6
Lsat_1_v5_gn_5_10020 Lactuca sativa HOM05D002266 ORTHO05D010337 6.1e-58 229.2 410 36.6
SalBow1G8312 Salvia bowleyana HOM05D002266 ORTHO05D010337 1.5e-56 224.6 417 36.7
FAN18G2616 Fragaria x ananassa HOM05D002266 ORTHO05D010337 2.6e-56 223.8 369 41.2
MBI07_g35979_MAGBIO Magnolia biondii HOM05D002266 ORTHO05D010337 2.7e-53 213.8 318 44.0
Dinv13716 Davidia involucrata HOM05D002266 ORTHO05D010337 1.3e-52 211.5 208 58.2
FAN13G2170 Fragaria x ananassa HOM05D002266 ORTHO05D010337 3.9e-52 209.9 371 38.5
unitig_747.g21318 Utricularia gibba HOM05D002266 ORTHO05D010337 3.3e-51 206.8 336 39.0
PSO339G3582 Papaver somniferum HOM05D002266 ORTHO05D010337 1.6e-50 204.5 445 34.2
PGSC0003DMG400014448 Solanum tuberosum HOM05D002266 ORTHO05D010337 4.6e-45 186.4 330 40.0
FAN08G1259 Fragaria x ananassa HOM05D002266 ORTHO05D010337 1.4e-41 174.9 379 36.1
SEGI_02612 Sequoiadendron giganteum HOM05D002266 ORTHO05D000002 2.0e-16 91.3 403 24.3
Cpa.g.sc13.177 Carica papaya HOM05D002266 ORTHO05D010337 5.1e-12 76.6 194 34.0
Sabra13G0033600 Salix brachista HOM05D002266 ORTHO05D010337 5.6e-11 73.2 72 54.2
AagrBONN_evm.TU.Sc2ySwM_228.1887 Anthoceros agrestis HOM05D002266 ORTHO05D010337 7.1e-06 56.2 166 28.3


User provided reference genes

Program Settings