Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.9e-118 428.7 234 100.0
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 2.6e-111 405.6 234 96.2
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 8.3e-110 400.6 236 94.5
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 1.4e-96 356.7 235 85.5
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 7.3e-90 334.3 236 81.4
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 6.2e-89 331.3 235 81.7
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 9.9e-87 323.9 236 78.4
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 5.4e-77 291.6 236 70.8
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 6.9e-72 274.6 235 68.1
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 5.8e-71 271.6 236 69.5
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 7.6e-71 271.2 236 65.3
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.3e-70 270.4 239 68.6
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 2.2e-70 269.6 242 66.1
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.2e-70 269.6 244 67.2
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 2.4e-69 266.2 240 67.5
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 2.4e-69 266.2 238 65.5
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 4.2e-69 265.4 237 65.4
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 2.1e-68 263.1 214 68.7
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 6.0e-68 261.5 240 65.0
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 1.3e-67 260.4 237 65.0
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 3.9e-67 258.8 235 66.0
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 5.1e-67 258.5 242 61.6
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 1.3e-65 253.8 239 64.0
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 1.6e-65 253.4 236 65.7
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.6e-65 253.4 240 64.6
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 3.7e-65 252.3 235 63.4
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 8.1e-65 251.1 239 64.4
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 8.1e-65 251.1 238 64.7
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 1.1e-64 250.8 237 64.1
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.1e-64 250.8 237 63.3
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 2.4e-64 249.6 235 63.8
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 3.1e-64 249.2 236 64.4
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 5.3e-64 248.4 217 65.9
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 6.9e-64 248.1 238 65.5
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 9.0e-64 247.7 234 64.1
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 2.0e-63 246.5 238 64.3
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 2.0e-63 246.5 256 62.1
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 2.6e-63 246.1 236 63.1
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 2.2e-62 243.0 221 65.2
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 3.8e-62 242.3 238 63.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 1.4e-61 240.4 237 62.0
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 1.4e-61 240.4 238 62.2
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.9e-61 240.0 237 62.4
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 2.5e-61 239.6 237 62.0
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.6e-60 235.3 238 59.7
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 6.0e-60 235.0 237 61.2
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 1.8e-59 233.4 237 62.0
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 3.0e-59 232.6 236 61.9
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.9e-59 232.3 230 62.6
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 5.1e-59 231.9 240 59.2
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 6.7e-59 231.5 235 60.0
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.1e-58 230.7 239 61.1
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 2.5e-58 229.6 236 58.9
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 7.4e-58 228.0 239 59.8
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 9.6e-58 227.6 236 58.5
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.6e-57 226.9 237 60.8
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 2.8e-57 226.1 237 59.1
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 3.7e-57 225.7 236 60.2
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 4.8e-57 225.3 211 59.2
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 6.3e-57 224.9 235 57.0
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 1.1e-56 224.2 239 60.3
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 1.8e-56 223.4 211 58.8
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.9e-56 221.5 217 62.2
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 6.9e-56 221.5 234 58.1
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 9.0e-56 221.1 212 59.4
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.2e-55 220.7 217 61.8
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.0e-55 219.9 248 58.1
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.4e-55 219.2 217 61.3
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.0e-54 217.6 224 60.7
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.0e-54 217.6 232 57.3
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 3.8e-54 215.7 233 56.2
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 5.0e-54 215.3 241 59.8
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 5.0e-54 215.3 232 57.3
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 5.0e-54 215.3 170 70.0
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 6.5e-54 214.9 172 68.6
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 1.1e-53 214.2 233 55.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.9e-53 213.4 238 55.5
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 2.5e-53 213.0 238 55.5
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.5e-53 213.0 175 69.7
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 3.2e-53 212.6 228 57.5
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.2e-53 212.6 236 57.2
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 5.5e-53 211.8 237 56.1
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 5.5e-53 211.8 235 55.7
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 9.3e-53 211.1 231 57.1
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 9.3e-53 211.1 187 65.2
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.6e-52 210.3 231 57.6
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.6e-52 210.3 234 56.4
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.6e-52 210.3 237 55.3
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.1e-52 209.9 260 54.6
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.7e-52 209.5 149 76.5
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.8e-51 206.8 232 56.0
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 5.1e-51 205.3 197 61.4
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 6.7e-51 204.9 237 55.7
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.5e-50 203.8 232 55.6
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.9e-50 203.4 145 75.2
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 7.4e-50 201.4 234 54.7
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 9.7e-50 201.1 169 64.5
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 2.8e-49 199.5 261 50.6
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 2.8e-49 199.5 169 63.3
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 5.3e-48 195.3 210 54.8
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.2e-47 194.1 259 52.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 2.6e-47 193.0 241 52.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 2.6e-47 193.0 201 61.7
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 7.7e-47 191.4 230 53.0
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 6.5e-46 188.3 168 60.1
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 8.5e-46 188.0 177 62.7
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 1.1e-45 187.6 227 50.2
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.6e-42 176.4 181 58.6
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.0e-39 166.8 197 57.4
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 6.5e-38 161.8 177 54.8
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 6.1e-36 155.2 140 63.6
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.1e-34 151.0 203 51.2
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 1.5e-34 150.6 128 64.1
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.8e-33 146.4 179 54.7
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 3.7e-33 146.0 128 61.7
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 2.2e-30 136.7 149 51.0
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 3.2e-29 132.9 144 50.0
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.2e-26 124.4 165 44.8
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 5.7e-26 122.1 184 43.5
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 7.0e-24 115.2 104 56.7
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 3.0e-19 99.8 75 66.7
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.8e-16 90.5 106 46.2
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.8e-16 90.5 105 48.6
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.8e-11 73.9 115 47.8
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 2.9e-06 56.6 108 41.7


User provided reference genes

Program Settings