Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G033700 Gossypium hirsutum HOM05D006886 ORTHO05D008494 6.0e-83 310.8 161 100.0
Duzib168G1824 Durio zibethinus HOM05D006886 ORTHO05D008494 4.7e-72 274.6 161 89.4
COL.COLO4_18973 Corchorus olitorius HOM05D006886 ORTHO05D008494 1.1e-68 263.5 161 86.3
Gorai.001G038900 Gossypium raimondii HOM05D006886 ORTHO05D008494 2.1e-67 259.2 137 97.8
Duzib187G0928 Durio zibethinus HOM05D006886 ORTHO05D008494 1.9e-65 252.7 157 83.4
Cfa013010 Carpinus fangiana HOM05D006886 ORTHO05D008494 7.1e-60 234.2 162 77.2
CiPaw.07G233000 Carya illinoinensis HOM05D006886 ORTHO05D008494 3.5e-59 231.9 149 77.9
Actinidia22280 Actinidia chinensis HOM05D006886 ORTHO05D008494 6.0e-59 231.1 161 73.3
Thecc.09G013300 Theobroma cacao HOM05D006886 ORTHO05D008494 1.5e-57 226.5 137 86.1
Dinv03403 Davidia involucrata HOM05D006886 ORTHO05D008494 3.3e-57 225.3 161 74.5
Rhsim02G0217500 Rhododendron simsii HOM05D006886 ORTHO05D008494 7.3e-57 224.2 158 74.1
Haze_21375 Corylus avellana HOM05D006886 ORTHO05D008494 1.3e-56 223.4 157 75.2
Cpa.g.sc148.45 Carica papaya HOM05D006886 ORTHO05D008494 1.1e-55 220.3 161 70.8
Cc08_g07710 Coffea canephora HOM05D006886 ORTHO05D008494 1.4e-55 219.9 162 71.0
MD08G1052100 Malus domestica HOM05D006886 ORTHO05D008494 1.8e-55 219.5 145 76.6
Potri.018G016300 Populus trichocarpa HOM05D006886 ORTHO05D008494 5.3e-55 218.0 161 67.7
MD15G1043400 Malus domestica HOM05D006886 ORTHO05D008494 3.4e-54 215.3 145 74.5
Manes.16G132100 Manihot esculenta HOM05D006886 ORTHO05D008494 4.5e-54 214.9 161 70.2
Lsat_1_v5_gn_3_22560 Lactuca sativa HOM05D006886 ORTHO05D008494 7.6e-54 214.2 158 72.2
QL02p018037 Quercus lobata HOM05D006886 ORTHO05D008494 1.3e-53 213.4 146 75.3
CANSAT25G2371 Cannabis sativa HOM05D006886 ORTHO05D008494 1.1e-52 210.3 149 69.1
Sabra18G0019800 Salix brachista HOM05D006886 ORTHO05D008494 3.2e-52 208.8 171 63.7
Sopen08g002580 Solanum pennellii HOM05D006886 ORTHO05D008494 5.4e-52 208.0 164 67.1
Oeu010292.1 Olea europaea HOM05D006886 ORTHO05D008494 9.3e-52 207.2 161 65.8
Lj7A737T48 Lonicera japonica HOM05D006886 ORTHO05D008494 1.2e-51 206.8 152 70.4
Nitab4.5_0000264g0070 Nicotiana tabacum HOM05D006886 ORTHO05D008494 3.5e-51 205.3 164 65.9
EL10Ac2g02461 Beta vulgaris HOM05D006886 ORTHO05D008494 6.0e-51 204.5 153 66.7
RcHm_v2.0_Chr6g0299191 Rosa chinensis HOM05D006886 ORTHO05D008494 1.0e-50 203.8 151 68.9
Solyc08g006630.3 Solanum lycopersicum HOM05D006886 ORTHO05D008494 1.8e-50 203.0 164 65.9
HanXRQChr17g0536351 Helianthus annuus HOM05D006886 ORTHO05D008494 3.9e-50 201.8 147 70.7
PGSC0003DMG400026287 Solanum tuberosum HOM05D006886 ORTHO05D008494 3.9e-50 201.8 164 65.2
Glyma.17G221700 Glycine max HOM05D006886 ORTHO05D008494 5.1e-50 201.4 149 69.8
vmacro11273 Vaccinium macrocarpon HOM05D006886 ORTHO05D008494 5.1e-50 201.4 185 61.6
TPR.G38843 Trifolium pratense HOM05D006886 ORTHO05D008494 6.7e-50 201.1 149 67.1
PSO063G3428 Papaver somniferum HOM05D006886 ORTHO05D008494 8.7e-50 200.7 161 65.2
TWI63G0132 Tripterygium wilfordii HOM05D006886 ORTHO05D008494 1.1e-49 200.3 149 67.1
Ciclev10010834m.g Citrus clementina HOM05D006886 ORTHO05D008494 1.5e-49 199.9 159 66.7
Sed0006692 Sechium edule HOM05D006886 ORTHO05D008494 1.5e-49 199.9 148 66.2
CAN.G285.18 Capsicum annuum HOM05D006886 ORTHO05D008494 1.9e-49 199.5 164 64.6
Lj5g0011023 Lotus japonicus HOM05D006886 ORTHO05D008494 2.5e-49 199.1 149 68.5
CsaV3_4G036380 Cucumis sativus L. HOM05D006886 ORTHO05D008494 3.3e-49 198.7 149 66.4
Hund25607 Selenicereus undatus HOM05D006886 ORTHO05D008494 3.3e-49 198.7 159 61.6
ECA246G1281 Erigeron canadensis HOM05D006886 ORTHO05D008494 7.4e-49 197.6 158 67.7
Ah.15g098740 Amaranthus hybridus HOM05D006886 ORTHO05D008494 1.6e-48 196.4 158 63.9
Medtr1g013640 Medicago truncatula HOM05D006886 ORTHO05D008494 1.6e-48 196.4 149 67.1
SGA_v2.0_scaffold27G11627 Striga asiatica HOM05D006886 ORTHO05D008494 1.6e-48 196.4 149 66.4
ClCG05G016110 Citrullus lanatus HOM05D006886 ORTHO05D008494 2.1e-48 196.1 176 59.1
Ca_13077_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 2.8e-48 195.7 167 61.7
Eucgr.F04206 Eucalyptus grandis HOM05D006886 ORTHO05D008494 2.8e-48 195.7 161 60.2
PSO782G0555 Papaver somniferum HOM05D006886 ORTHO05D008494 3.7e-48 195.3 161 63.4
Sp4g03960 Schrenkiella parvula HOM05D006886 ORTHO05D008494 3.7e-48 195.3 149 65.8
Actinidia14002 Actinidia chinensis HOM05D006886 ORTHO05D008494 4.8e-48 194.9 159 64.8
Thhalv10000363m.g Eutrema salsugineum HOM05D006886 ORTHO05D008494 6.2e-48 194.5 150 66.7
Glyma.14G104300 Glycine max HOM05D006886 ORTHO05D008494 8.1e-48 194.1 149 67.1
A09p55990 Brassica napus HOM05D006886 ORTHO05D008494 1.1e-47 193.7 149 64.4
A09p56060 Brassica napus HOM05D006886 ORTHO05D008494 1.1e-47 193.7 149 64.4
BraA09t41001Z Brassica rapa HOM05D006886 ORTHO05D008494 1.1e-47 193.7 149 64.4
CDE04G0647 Ceratophyllum demersum HOM05D006886 ORTHO05D008494 1.1e-47 193.7 146 65.8
Phvul.001G042700 Phaseolus vulgaris HOM05D006886 ORTHO05D008494 1.4e-47 193.4 149 65.8
MSTRG.11790 Avicennia marina HOM05D006886 ORTHO05D008494 3.1e-47 192.2 149 65.8
Carub.0004s0454 Capsella rubella HOM05D006886 ORTHO05D008494 3.1e-47 192.2 149 65.8
PGR042G1056 Punica granatum HOM05D006886 ORTHO05D008494 3.1e-47 192.2 144 68.8
Aqoxy7G03293 Aquilegia oxysepala HOM05D006886 ORTHO05D008494 4.0e-47 191.8 149 65.1
AUR62032440 Chenopodium quinoa HOM05D006886 ORTHO05D008494 4.0e-47 191.8 175 58.3
AL4G16050 Arabidopsis lyrata HOM05D006886 ORTHO05D008494 5.3e-47 191.4 161 61.5
arahy.Tifrunner.gnm1.ann1.QF2P07 Arachis hypogaea HOM05D006886 ORTHO05D008494 5.3e-47 191.4 158 63.9
Hma1.2p1_0355F.1_g133950 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 6.9e-47 191.0 152 63.2
THA.LOC104819952 Tarenaya hassleriana HOM05D006886 ORTHO05D008494 1.2e-46 190.3 149 64.4
Atru.chr7.2575 Acer truncatum HOM05D006886 ORTHO05D008494 2.0e-46 189.5 157 61.8
Prupe.1G396800 Prunus persica HOM05D006886 ORTHO05D008494 2.0e-46 189.5 123 78.0
Sc17g0004260 Simmondsia chinensis HOM05D006886 ORTHO05D008494 7.6e-46 187.6 155 61.9
CARHR116750 Cardamine hirsuta HOM05D006886 ORTHO05D008494 9.9e-46 187.2 148 65.5
Nn2g12469 Nelumbo nucifera HOM05D006886 ORTHO05D008494 9.9e-46 187.2 138 69.6
TAR625G1053 Trochodendron aralioides HOM05D006886 ORTHO05D008494 9.9e-46 187.2 129 73.6
CSS0014970 Camellia sinensis var. sinensis HOM05D006886 ORTHO05D008494 1.7e-45 186.4 135 72.6
AT2G24970 Arabidopsis thaliana HOM05D006886 ORTHO05D008494 2.9e-45 185.7 149 63.1
Migut.A00389 Erythranthe guttata HOM05D006886 ORTHO05D008494 3.8e-45 185.3 148 67.6
MBI15_g26075_MAGBIO Magnolia biondii HOM05D006886 ORTHO05D008494 3.8e-45 185.3 193 56.5
Dinv16422 Davidia involucrata HOM05D006886 ORTHO05D008494 2.4e-44 182.6 123 76.4
Lalb_Chr14g0361721 Lupinus albus HOM05D006886 ORTHO05D008494 2.4e-44 182.6 147 61.2
C08p38980 Brassica napus HOM05D006886 ORTHO05D008494 4.6e-43 178.3 149 61.1
FAN27G2382 Fragaria x ananassa HOM05D006886 ORTHO05D008494 1.3e-42 176.8 125 70.4
BcaC07g40900 Brassica carinata HOM05D006886 ORTHO05D008494 1.9e-41 172.9 147 60.5
BolC8t51472H Brassica oleracea HOM05D006886 ORTHO05D008494 1.9e-41 172.9 147 60.5
ATR0580G343 Amborella trichopoda HOM05D006886 ORTHO05D008494 8.2e-40 167.5 145 60.0
arahy.Tifrunner.gnm1.ann1.5WK6RP Arachis hypogaea HOM05D006886 ORTHO05D008494 1.4e-39 166.8 137 65.0
Psat6g024960 Pisum sativum HOM05D006886 ORTHO05D008494 2.4e-39 166.0 152 55.3
FvH4_2g41341 Fragaria vesca HOM05D006886 ORTHO05D008494 1.5e-38 163.3 116 70.7
Cfa001083 Carpinus fangiana HOM05D006886 ORTHO05D008494 3.4e-38 162.2 162 59.3
AUR62024781 Chenopodium quinoa HOM05D006886 ORTHO05D008494 4.5e-38 161.8 119 66.4
VMungo0647G1481 Vigna mungo HOM05D006886 ORTHO05D008494 4.5e-38 161.8 127 64.6
FAN15G0524 Fragaria x ananassa HOM05D006886 ORTHO05D008494 7.6e-38 161.0 113 70.8
Gohir.D07G037233 Gossypium hirsutum HOM05D006886 ORTHO05D008494 1.9e-36 156.4 111 76.6
BcaB08g35125 Brassica carinata HOM05D006886 ORTHO05D008494 2.1e-35 152.9 124 63.7
Nitab4.5_0001362g0050 Nicotiana tabacum HOM05D006886 ORTHO05D008494 1.5e-33 146.7 114 66.7
Peaxi162Scf00045g01941 Petunia axillaris HOM05D006886 ORTHO05D008494 5.7e-33 144.8 158 51.9
Aa31sc83G60 Aethionema arabicum HOM05D006886 ORTHO05D008494 9.7e-33 144.1 119 62.2
SHI21090 Sapria himalayana HOM05D006886 ORTHO05D008494 2.2e-32 142.9 111 64.0
GSVIVG01036001001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.8e-26 123.2 80 80.0
RcHm_v2.0_Chr7g0186961 Rosa chinensis HOM05D006886 ORTHO05D008494 6.7e-26 121.3 88 67.0
Os01g0766400 Oryza sativa ssp. japonica HOM05D006886 ORTHO05D008494 3.3e-25 119.0 145 42.8
MELO3C032323.2 Cucumis melo HOM05D006886 ORTHO05D008494 1.8e-23 113.2 69 79.7
Pp3c17_11010 Physcomitrium patens HOM05D006886 ORTHO05D008494 4.1e-23 112.1 144 43.1
Zm00001eb192560 Zea mays HOM05D006886 ORTHO05D008494 9.1e-23 110.9 145 39.3
GSVIVG01036003001 Vitis vinifera HOM05D006886 ORTHO05D008494 1.2e-22 110.5 74 71.6
Pp3c14_9080 Physcomitrium patens HOM05D006886 ORTHO05D008494 7.7e-22 107.8 125 44.0
Cfa023326 Carpinus fangiana HOM05D006886 ORTHO05D008494 1.0e-21 107.5 88 67.0
MD05G1059000 Malus domestica HOM05D006886 ORTHO05D008494 6.5e-21 104.8 71 74.6
AagrBONN_evm.TU.Sc2ySwM_344.4138 Anthoceros agrestis HOM05D006886 ORTHO05D008494 8.5e-21 104.4 129 40.3
Hma1.2p1_0355F.1_g133940 Hydrangea macrophylla HOM05D006886 ORTHO05D008494 1.6e-19 100.1 76 61.8
Mapoly0034s0101 Marchantia polymorpha HOM05D006886 ORTHO05D008494 2.1e-19 99.8 120 43.3
SalBow4G1854 Salvia bowleyana HOM05D006886 ORTHO05D008494 3.3e-17 92.4 82 61.0
MELO3C032324.2 Cucumis melo HOM05D006886 ORTHO05D008494 6.3e-16 88.2 98 46.9
Ca_06796_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 5.5e-12 75.1 61 63.9
Ca_13745_v3 Cicer arietinum L. HOM05D006886 ORTHO05D008494 1.1e-09 67.4 60 60.0
Cre03.g201500 Chlamydomonas reinhardtii HOM05D006886 ORTHO05D008494 1.1e-07 60.8 145 30.3
CAN.G285.15 Capsicum annuum HOM05D006886 ORTHO05D008494 1.8e-07 60.1 59 52.5


User provided reference genes

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