Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 3.1e-286 988.4 779 100.0
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.0e-269 932.6 779 95.6
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 5.0e-268 927.9 779 90.5
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.8e-178 629.8 779 69.8
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 5.9e-176 622.1 779 71.2
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 2.2e-154 550.4 779 70.0
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 2.3e-140 503.8 692 73.3
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 6.8e-132 475.7 775 65.4
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.7e-130 469.9 773 61.6
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 5.4e-129 466.1 753 56.3
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 4.5e-128 463.0 770 57.3
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 2.9e-127 460.3 773 53.3
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-126 458.4 773 58.7
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 3.6e-125 453.4 772 58.0
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 8.0e-125 452.2 773 62.6
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.4e-123 446.8 773 55.9
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 4.9e-122 443.0 741 65.9
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 3.1e-116 423.7 771 58.9
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 5.2e-116 422.9 774 54.9
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 8.3e-114 415.6 772 60.8
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 6.0e-112 409.5 771 58.1
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 7.8e-112 409.1 778 55.3
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 7.8e-112 409.1 772 54.4
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 1.3e-111 408.3 772 55.3
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 2.0e-107 394.4 774 59.8
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 9.8e-107 392.1 773 58.7
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 5.4e-105 386.3 775 56.4
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 7.1e-105 386.0 782 56.3
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 1.0e-103 382.1 769 58.6
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 1.8e-100 371.3 789 53.6
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.5e-99 368.2 791 44.6
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 5.8e-99 366.3 776 57.6
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 1.3e-98 365.2 788 55.7
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 3.8e-98 363.6 769 59.8
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.1e-97 362.1 772 57.3
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.5e-94 351.7 748 60.8
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.2e-93 348.6 775 55.2
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.8e-93 347.4 748 59.6
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 2.8e-93 347.4 775 55.5
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 4.0e-92 343.6 731 53.6
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.4e-89 335.1 732 55.1
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.4e-89 333.2 780 55.0
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 3.5e-88 330.5 784 54.3
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 7.8e-88 329.3 759 57.3
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 1.9e-86 324.7 747 59.4
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 5.6e-86 323.2 777 55.5
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 9.6e-86 322.4 759 55.2
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 1.1e-84 318.9 748 44.0
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 1.2e-83 315.5 783 55.7
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 3.4e-83 313.9 730 48.9
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 3.4e-83 313.9 748 43.3
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 9.9e-83 312.4 464 54.5
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 1.7e-82 311.6 773 51.9
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 2.2e-82 311.2 772 54.1
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 1.2e-80 305.4 729 52.5
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 2.1e-80 304.7 769 50.6
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 4.6e-80 303.5 773 48.3
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 3.0e-79 300.8 758 54.5
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.5e-78 298.5 725 47.6
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 4.3e-78 297.0 772 55.2
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 5.6e-78 296.6 743 48.2
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 6.2e-77 293.1 738 54.6
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 2.4e-76 291.2 735 53.6
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 3.4e-75 287.3 771 49.7
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 3.4e-75 287.3 772 47.2
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.4e-75 287.3 484 53.1
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 7.6e-75 286.2 752 47.2
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 3.8e-74 283.9 778 53.5
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 3.8e-74 283.9 778 53.5
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 2.7e-72 277.7 764 50.1
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 3.5e-72 277.3 775 53.8
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 4.6e-72 276.9 494 50.0
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 6.0e-72 276.6 768 50.9
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 6.0e-72 276.6 754 47.6
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 3.9e-71 273.9 771 45.5
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 1.5e-70 271.9 689 51.5
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 7.4e-70 269.6 729 53.9
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 2.4e-68 264.6 733 53.2
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 1.7e-66 258.5 451 49.4
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 1.6e-64 251.9 773 48.0
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.5e-64 250.8 770 50.4
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 1.8e-63 248.4 742 52.4
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 3.9e-63 247.3 421 50.6
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 1.8e-60 238.4 776 44.8
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 5.3e-60 236.9 744 53.8
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 1.7e-58 231.9 774 46.0
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 7.9e-56 223.0 776 49.0
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 1.5e-54 218.8 763 45.5
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 3.3e-54 217.6 771 44.5
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 6.9e-52 209.9 776 45.6
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 1.2e-51 209.1 778 43.2
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 4.2e-49 200.7 787 45.1
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 7.2e-49 199.9 739 45.9
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 3.6e-48 197.6 485 42.7
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 2.6e-43 181.4 731 38.3
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 1.1e-36 159.5 343 49.3
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 3.0e-31 141.4 188 47.9
BraA10t43273Z Brassica rapa HOM05D006421 ORTHO05D008268 6.7e-31 140.2 160 51.9
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 8.8e-31 139.8 457 32.8
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 1.2e-30 139.4 202 46.5
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 2.8e-29 134.8 734 42.1
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 1.1e-28 132.9 752 38.6
FAN15G3016 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.4e-28 131.7 262 52.7
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 1.7e-26 125.6 724 42.1
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 1.1e-25 122.9 367 29.4
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 4.8e-21 107.5 505 32.9
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 1.6e-19 102.4 748 44.9
FAN15G2294 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.9e-17 95.5 355 33.5
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 2.3e-15 88.6 345 58.3
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 4.9e-13 80.9 736 44.4
CDE07G0223 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 4.5e-11 74.3 112 39.3
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 4.5e-11 74.3 155 41.9
FAN15G3111 Fragaria x ananassa HOM05D006421 ORTHO05D008268 7.8e-11 73.6 138 44.2
A03p32460 Brassica napus HOM05D003015 ORTHO05D024548 4.3e-09 67.8 96 53.1
BraA07t31256Z Brassica rapa HOM05D000793 ORTHO05D024548 7.3e-09 67.0 96 53.1
Sabra18G0029000 Salix brachista HOM05D006421 ORTHO05D008268 3.6e-08 64.7 104 42.3
Sabra18G0028800 Salix brachista HOM05D006421 ORTHO05D008268 4.7e-08 64.3 112 41.1
C02p24120 Brassica napus HOM05D006421 ORTHO05D039759 5.2e-07 60.8 86 46.5
BcaC03g14920 Brassica carinata HOM05D006421 ORTHO05D039759 6.8e-07 60.5 86 46.5
CDE06G1662 Ceratophyllum demersum HOM05D006421 ORTHO05D008268 2.6e-06 58.5 71 47.9


User provided reference genes

Program Settings