Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A07G011000 Gossypium hirsutum HOM05D007811 ORTHO05D009888 0.0e+00 1381.3 699 100.0
Gohir.D07G011150 Gossypium hirsutum HOM05D007811 ORTHO05D009888 0.0e+00 1327.0 699 96.6
Gorai.001G011700 Gossypium raimondii HOM05D007811 ORTHO05D009888 0.0e+00 1324.7 699 96.4
Duzib168G1142 Durio zibethinus HOM05D007811 ORTHO05D009888 5.8e-284 980.7 700 72.4
COL.COLO4_18202 Corchorus olitorius HOM05D007811 ORTHO05D009888 3.2e-258 895.2 696 67.5
Thecc.09G089600 Theobroma cacao HOM05D007811 ORTHO05D009888 3.0e-240 835.5 576 72.9
QL02p062715 Quercus lobata HOM05D007811 ORTHO05D009888 7.5e-199 698.0 698 53.7
Ciclev10010815m.g Citrus clementina HOM05D007811 ORTHO05D009888 1.0e-195 687.6 700 52.4
Haze_25911 Corylus avellana HOM05D007811 ORTHO05D009888 1.4e-192 677.2 699 52.9
TWI34G0321 Tripterygium wilfordii HOM05D007811 ORTHO05D009888 1.1e-186 657.5 705 52.6
Prupe.7G209900 Prunus persica HOM05D007811 ORTHO05D009888 1.9e-186 656.8 704 52.0
TAR383G0833 Trochodendron aralioides HOM05D007811 ORTHO05D009888 1.9e-186 656.8 703 52.1
Potri.006G144600 Populus trichocarpa HOM05D007811 ORTHO05D009888 6.8e-184 648.3 701 51.6
Atru.chr7.1587 Acer truncatum HOM05D007811 ORTHO05D009888 4.6e-180 635.6 633 53.1
Sabra06G0113100 Salix brachista HOM05D007811 ORTHO05D009888 2.1e-177 626.7 708 49.9
Sabra06G0114400 Salix brachista HOM05D007811 ORTHO05D009888 2.1e-177 626.7 708 49.9
MD02G1079300 Malus domestica HOM05D007811 ORTHO05D009888 4.0e-176 622.5 700 50.0
Actinidia39718 Actinidia chinensis HOM05D007811 ORTHO05D009888 3.4e-175 619.4 700 49.9
FAN19G2727 Fragaria x ananassa HOM05D007811 ORTHO05D009888 1.3e-174 617.5 699 50.6
FAN26G0113 Fragaria x ananassa HOM05D007811 ORTHO05D009888 1.9e-173 613.6 699 50.9
FvH4_1g07420 Fragaria vesca HOM05D007811 ORTHO05D009888 2.4e-173 613.2 699 50.4
FAN23G0562 Fragaria x ananassa HOM05D007811 ORTHO05D009888 2.3e-171 606.7 699 50.6
GSVIVG01015202001 Vitis vinifera HOM05D007811 ORTHO05D009888 3.9e-171 605.9 701 50.4
FAN28G1627 Fragaria x ananassa HOM05D007811 ORTHO05D009888 3.3e-170 602.8 693 50.8
Manes.03G033600 Manihot esculenta HOM05D007811 ORTHO05D009888 1.3e-169 600.9 703 48.8
RcHm_v2.0_Chr2g0093321 Rosa chinensis HOM05D007811 ORTHO05D009888 8.1e-169 598.2 700 50.0
Cfa003088 Carpinus fangiana HOM05D007811 ORTHO05D009888 3.1e-168 596.3 701 49.2
CiPaw.03G216500 Carya illinoinensis HOM05D007811 ORTHO05D009888 3.8e-166 589.3 635 50.4
CANSAT56G0268 Cannabis sativa HOM05D007811 ORTHO05D009888 2.6e-159 566.6 690 45.8
Dinv42318 Davidia involucrata HOM05D007811 ORTHO05D009888 1.7e-158 563.9 567 53.1
Hma1.2p1_0798F.1_g219820 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 3.0e-155 553.1 696 46.8
FAN26G2623 Fragaria x ananassa HOM05D007811 ORTHO05D009888 5.5e-149 532.3 622 49.7
DCAR_032238 Daucus carota HOM05D007811 ORTHO05D009888 3.5e-148 529.6 707 45.3
Hma1.2p1_2664F.1_g326430 Hydrangea macrophylla HOM05D007811 ORTHO05D009888 3.5e-148 529.6 668 46.9
Aqoxy7G04046 Aquilegia oxysepala HOM05D007811 ORTHO05D009888 8.5e-142 508.4 699 43.6
THA.LOC104817755 Tarenaya hassleriana HOM05D007811 ORTHO05D009888 2.5e-141 506.9 704 43.6
CANSAT56G0922 Cannabis sativa HOM05D007811 ORTHO05D009888 6.7e-139 498.8 690 42.5
PGR102G3061 Punica granatum HOM05D007811 ORTHO05D009888 1.1e-138 498.0 706 44.3
Sopen07g018370 Solanum pennellii HOM05D007811 ORTHO05D009888 1.5e-138 497.7 694 41.9
Solyc07g038100.3 Solanum lycopersicum HOM05D007811 ORTHO05D009888 5.7e-138 495.7 694 41.6
PGSC0003DMG400009724 Solanum tuberosum HOM05D007811 ORTHO05D009888 1.8e-136 490.7 695 41.3
HanXRQChr12g0354871 Helianthus annuus HOM05D007811 ORTHO05D009888 2.6e-135 486.9 694 41.2
Thhalv10006501m.g Eutrema salsugineum HOM05D007811 ORTHO05D009888 4.7e-132 476.1 694 41.8
Nitab4.5_0004978g0030 Nicotiana tabacum HOM05D007811 ORTHO05D009888 2.3e-131 473.8 694 39.9
MSTRG.19514 Avicennia marina HOM05D007811 ORTHO05D009888 2.6e-130 470.3 722 39.6
Nitab4.5_0005634g0040 Nicotiana tabacum HOM05D007811 ORTHO05D009888 2.2e-129 467.2 696 39.9
PSO210G1027 Papaver somniferum HOM05D007811 ORTHO05D009888 1.4e-128 464.5 700 40.3
BcaB02g08177 Brassica carinata HOM05D007811 ORTHO05D009888 1.5e-127 461.1 693 40.3
SalBow6G0727 Salvia bowleyana HOM05D007811 ORTHO05D009888 2.0e-127 460.7 707 40.5
Nn6g35473 Nelumbo nucifera HOM05D007811 ORTHO05D009888 3.5e-127 459.9 703 40.4
AT3G60310 Arabidopsis thaliana HOM05D007811 ORTHO05D009888 1.0e-126 458.4 698 41.1
BraA04t15894Z Brassica rapa HOM05D007811 ORTHO05D009888 8.5e-126 455.3 696 40.4
BcaC02g10146 Brassica carinata HOM05D007811 ORTHO05D009888 1.9e-125 454.1 696 40.2
Sc18g0001990 Simmondsia chinensis HOM05D007811 ORTHO05D009888 1.9e-125 454.1 700 40.3
BolC4t24783H Brassica oleracea HOM05D007811 ORTHO05D009888 5.5e-125 452.6 696 40.1
C04p32330 Brassica napus HOM05D007811 ORTHO05D009888 1.2e-124 451.4 696 40.2
AL5G42530 Arabidopsis lyrata HOM05D007811 ORTHO05D009888 1.6e-124 451.1 701 39.9
PSO210G6552 Papaver somniferum HOM05D007811 ORTHO05D009888 3.0e-123 446.8 698 39.4
CARHR170630 Cardamine hirsuta HOM05D007811 ORTHO05D009888 8.8e-123 445.3 704 39.5
A04p01700 Brassica napus HOM05D007811 ORTHO05D009888 3.7e-121 439.9 710 38.9
Carub.0005s2705 Capsella rubella HOM05D007811 ORTHO05D009888 7.7e-119 432.2 635 41.3
SGA_v2.0_scaffold10G05228 Striga asiatica HOM05D007811 ORTHO05D009888 1.0e-118 431.8 703 38.3
Lsat_1_v5_gn_5_142361 Lactuca sativa HOM05D007811 ORTHO05D009888 5.0e-118 429.5 697 37.6
Migut.J00617 Erythranthe guttata HOM05D007811 ORTHO05D009888 4.4e-114 416.4 593 39.5
Peaxi162Scf01121g00111 Petunia axillaris HOM05D007811 ORTHO05D009888 9.7e-114 415.2 703 37.6
ECA234G0321 Erigeron canadensis HOM05D007811 ORTHO05D009888 1.1e-109 401.7 695 38.1
Cpa.g.sc93.35 Carica papaya HOM05D007811 ORTHO05D009888 2.6e-106 390.6 434 47.7
HPP92_003971 Vanilla planifolia HOM05D007811 ORTHO05D009888 1.6e-100 371.3 689 35.3
ATR0749G017 Amborella trichopoda HOM05D007811 ORTHO05D009888 1.1e-85 322.0 764 30.9
Eucgr.C03899 Eucalyptus grandis HOM05D007811 ORTHO05D009888 4.4e-82 310.1 435 40.5
Cc00_g27490 Coffea canephora HOM05D007811 ORTHO05D009888 1.4e-80 305.1 388 44.8
Oeu042653.6 Olea europaea HOM05D007811 ORTHO05D009888 1.2e-79 302.0 704 33.1
Zm00001eb376990 Zea mays HOM05D007811 ORTHO05D009888 4.3e-77 293.5 717 32.5
MBI01_g21120_MAGBIO Magnolia biondii HOM05D007811 ORTHO05D009888 2.6e-74 284.3 459 38.3
Cpa.g.sc93.36 Carica papaya HOM05D007811 ORTHO05D009888 9.2e-72 275.8 267 58.4
SEGI_03446 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 1.4e-48 198.7 787 26.6
DCAR_028591 Daucus carota HOM05D007811 ORTHO05D009888 1.1e-45 189.1 546 29.3
CAN.G720.2 Capsicum annuum HOM05D007811 ORTHO05D009888 5.8e-34 150.2 207 36.2
CDE04G1243 Ceratophyllum demersum HOM05D000793 ORTHO05D000783 1.4e-32 145.6 406 31.3
SEGI_10589 Sequoiadendron giganteum HOM05D007811 ORTHO05D009888 5.5e-32 143.7 590 25.4
Cfa003090 Carpinus fangiana HOM05D007811 ORTHO05D009888 1.2e-31 142.5 162 46.9
Mapoly0096s0065 Marchantia polymorpha HOM05D007811 ORTHO05D009888 6.5e-25 120.2 270 31.1
Haze_25909 Corylus avellana HOM05D007811 ORTHO05D009888 3.9e-22 110.9 166 42.8
CAN.G720.1 Capsicum annuum HOM05D007811 ORTHO05D009888 2.0e-18 98.6 119 42.9
AagrBONN_evm.TU.Sc2ySwM_344.5247 Anthoceros agrestis HOM05D007811 ORTHO05D009888 3.9e-14 84.3 246 30.9
TAR626G1045 Trochodendron aralioides HOM05D000238 ORTHO05D011431 9.4e-08 63.2 60 60.0


User provided reference genes

Program Settings