Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A06G143350 Gossypium hirsutum HOM05D008314 ORTHO05D010369 5.1e-44 180.6 89 100.0
Gohir.D06G149000 Gossypium hirsutum HOM05D008314 ORTHO05D010369 2.0e-35 152.1 80 95.0
Gorai.010G173500 Gossypium raimondii HOM05D008314 ORTHO05D010369 4.8e-34 147.5 82 92.7
Thecc.06G129300 Theobroma cacao HOM05D008314 ORTHO05D010369 1.3e-23 112.8 86 68.6
Thecc.03G325500 Theobroma cacao HOM05D008314 ORTHO05D010369 4.2e-22 107.8 87 67.8
Duzib235G1505 Durio zibethinus HOM05D008314 ORTHO05D010369 4.7e-21 104.4 83 61.4
Duzib160G0115 Durio zibethinus HOM05D008314 ORTHO05D010369 2.0e-19 99.0 81 60.5
Duzib160G0571 Durio zibethinus HOM05D008314 ORTHO05D010369 8.3e-18 93.6 84 58.3
Manes.11G013300 Manihot esculenta HOM05D008314 ORTHO05D010369 3.5e-16 88.2 83 55.4
Atru.chr1.4110 Acer truncatum HOM05D008314 ORTHO05D010369 1.0e-15 86.7 91 53.8
QL05p001376 Quercus lobata HOM05D008314 ORTHO05D010369 2.3e-15 85.5 84 48.8
SalBow6G0833 Salvia bowleyana HOM05D008314 ORTHO05D010369 2.3e-15 85.5 80 52.5
Oeu008398.2 Olea europaea HOM05D008314 ORTHO05D010369 6.6e-15 84.0 82 54.9
TWI14G0587 Tripterygium wilfordii HOM05D008314 ORTHO05D010369 6.6e-15 84.0 84 48.8
Oeu059021.1 Olea europaea HOM05D008314 ORTHO05D010369 8.6e-15 83.6 83 55.4
Dinv37824 Davidia involucrata HOM05D008314 ORTHO05D010369 7.2e-14 80.5 90 50.0
Cpa.g.sc25.184 Carica papaya HOM05D008314 ORTHO05D010369 1.6e-13 79.3 89 48.3
CSS0041009 Camellia sinensis var. sinensis HOM05D008314 ORTHO05D010369 4.7e-13 77.8 84 50.0
Phvul.010G123800 Phaseolus vulgaris HOM05D008314 ORTHO05D010369 4.7e-13 77.8 88 46.6
Cc04_g00790 Coffea canephora HOM05D008314 ORTHO05D010369 6.1e-13 77.4 82 45.1
COL.COLO4_30857 Corchorus olitorius HOM05D008314 ORTHO05D010369 6.1e-13 77.4 36 91.7
Potri.003G072000 Populus trichocarpa HOM05D008314 ORTHO05D010369 6.1e-13 77.4 85 48.2
Ciclev10027008m.g Citrus clementina HOM05D008314 ORTHO05D010369 8.0e-13 77.0 86 53.5
RcHm_v2.0_Chr2g0147741 Rosa chinensis HOM05D008314 ORTHO05D010369 1.0e-12 76.6 94 47.9
FvH4_6g35740 Fragaria vesca HOM05D008314 ORTHO05D010369 2.3e-12 75.5 96 45.8
Prupe.3G031600 Prunus persica HOM05D008314 ORTHO05D010369 2.3e-12 75.5 87 50.6
FAN05G1710 Fragaria x ananassa HOM05D008314 ORTHO05D010369 4.0e-12 74.7 96 45.8
FAN09G4263 Fragaria x ananassa HOM05D008314 ORTHO05D010369 5.2e-12 74.3 96 44.8
MBI13_g01687_MAGBIO Magnolia biondii HOM05D008314 ORTHO05D010369 6.8e-12 73.9 76 51.3
Rhsim12G0213100 Rhododendron simsii HOM05D008314 ORTHO05D010369 8.9e-12 73.6 82 47.6
MELO3C024311.2 Cucumis melo HOM05D008314 ORTHO05D010369 1.2e-11 73.2 88 44.3
Nn6g35721 Nelumbo nucifera HOM05D008314 ORTHO05D010369 1.2e-11 73.2 91 51.6
Sed0005090 Sechium edule HOM05D008314 ORTHO05D010369 2.6e-11 72.0 92 44.6
Glyma.16G013200 Glycine max HOM05D008314 ORTHO05D010369 3.4e-11 71.6 84 47.6
TAR070G0001 Trochodendron aralioides HOM05D008314 ORTHO05D010369 3.4e-11 71.6 75 50.7
CiPaw.01G212000 Carya illinoinensis HOM05D008314 ORTHO05D010369 7.5e-11 70.5 86 48.8
ClCG09G001340 Citrullus lanatus HOM05D008314 ORTHO05D010369 7.5e-11 70.5 88 44.3
ATR0099G003 Amborella trichopoda HOM05D008314 ORTHO05D010369 9.8e-11 70.1 83 45.8
CsaV3_7G033990 Cucumis sativus L. HOM05D008314 ORTHO05D010369 1.7e-10 69.3 76 47.4
FAN02G2954 Fragaria x ananassa HOM05D008314 ORTHO05D010369 1.7e-10 69.3 96 40.6
PSO724G1385 Papaver somniferum HOM05D008314 ORTHO05D010369 2.8e-10 68.6 57 52.6
Ciclev10026853m.g Citrus clementina HOM05D008314 ORTHO05D010369 3.7e-10 68.2 88 44.3
PSO135G0082 Papaver somniferum HOM05D008314 ORTHO05D010369 3.7e-10 68.2 56 57.1
MD09G1173500 Malus domestica HOM05D008314 ORTHO05D010369 1.1e-09 66.6 85 43.5
Rhsim08G0244000 Rhododendron simsii HOM05D008314 ORTHO05D010369 1.8e-09 65.9 98 40.8
Medtr8g022990 Medicago truncatula HOM05D008314 ORTHO05D010369 7.0e-09 63.9 73 42.5
Os02g0564600 Oryza sativa ssp. japonica HOM05D008314 ORTHO05D010369 7.0e-09 63.9 35 74.3
CiPaw.01G212100 Carya illinoinensis HOM05D008314 ORTHO05D010369 1.2e-08 63.2 76 50.0
SEGI_28829 Sequoiadendron giganteum HOM05D008314 ORTHO05D010369 1.2e-08 63.2 68 45.6
Lalb_Chr17g0343301 Lupinus albus HOM05D008314 ORTHO05D010369 4.5e-08 61.2 74 37.8
Actinidia24433 Actinidia chinensis HOM05D008314 ORTHO05D010369 5.9e-08 60.8 89 43.8
Oeu059020.1 Olea europaea HOM05D008314 ORTHO05D010369 5.9e-08 60.8 47 55.3
Psat4g165800 Pisum sativum HOM05D008314 ORTHO05D010369 5.9e-08 60.8 61 39.3
arahy.Tifrunner.gnm1.ann1.K03VIU Arachis hypogaea HOM05D008314 ORTHO05D010369 1.0e-07 60.1 90 40.0
AUR62001414 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.7e-07 59.3 33 69.7
arahy.Tifrunner.gnm1.ann1.0KI29H Arachis hypogaea HOM05D008314 ORTHO05D010369 2.9e-07 58.5 81 43.2
SEGI_18497 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 5.0e-07 57.8 39 59.0
AUR62025623 Chenopodium quinoa HOM05D008314 ORTHO05D010369 1.5e-06 56.2 85 38.8
SEGI_22804 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 1.5e-06 56.2 39 56.4
Zm00001eb019440 Zea mays HOM05D008314 ORTHO05D010369 4.3e-06 54.7 77 40.3
SEGI_24113 Sequoiadendron giganteum HOM05D042000 ORTHO05D010369 7.3e-06 53.9 35 60.0


User provided reference genes

Program Settings