Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A06G133600 Gossypium hirsutum HOM05D005007 ORTHO05D006053 2.1e-49 198.7 102 100.0
Gohir.D06G138700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.0e-48 196.4 102 99.0
Gorai.010G161300 Gossypium raimondii HOM05D005007 ORTHO05D006053 2.3e-48 195.3 102 98.0
COL.COLO4_31238 Corchorus olitorius HOM05D005007 ORTHO05D006053 3.0e-32 141.7 109 73.4
Thecc.06G165800 Theobroma cacao HOM05D005007 ORTHO05D006053 3.7e-30 134.8 104 74.0
Duzib160G0236 Durio zibethinus HOM05D005007 ORTHO05D006053 6.3e-30 134.0 102 74.5
Duzib235G0435 Durio zibethinus HOM05D005007 ORTHO05D006053 2.0e-28 129.0 105 68.6
Duzib192G0425 Durio zibethinus HOM05D005007 ORTHO05D006053 1.5e-26 122.9 101 70.3
Ca_17898_v3 Cicer arietinum L. HOM05D005007 ORTHO05D006053 1.8e-24 115.9 84 63.1
Gohir.D05G156101 Gossypium hirsutum HOM05D005007 ORTHO05D006053 4.0e-24 114.8 74 78.4
Gohir.A05G153450 Gossypium hirsutum HOM05D005007 ORTHO05D006053 6.8e-24 114.0 98 66.3
Dinv32340 Davidia involucrata HOM05D005007 ORTHO05D006053 2.0e-23 112.5 101 63.4
Manes.16G043000 Manihot esculenta HOM05D005007 ORTHO05D006053 2.6e-23 112.1 104 59.6
Potri.011G070400 Populus trichocarpa HOM05D005007 ORTHO05D006053 3.4e-23 111.7 84 67.9
Hma1.2p1_0934F.1_g238510 Hydrangea macrophylla HOM05D005007 ORTHO05D006053 7.5e-23 110.5 101 59.4
Actinidia35601 Actinidia chinensis HOM05D005007 ORTHO05D006053 9.8e-23 110.2 101 65.3
Ciclev10017907m.g Citrus clementina HOM05D005007 ORTHO05D006053 1.3e-22 109.8 88 62.5
Dinv12754 Davidia involucrata HOM05D005007 ORTHO05D006053 2.8e-22 108.6 101 62.4
Potri.004G061100 Populus trichocarpa HOM05D005007 ORTHO05D006053 3.7e-22 108.2 96 60.4
Lalb_Chr13g0295281 Lupinus albus HOM05D005007 ORTHO05D006053 1.1e-21 106.7 88 65.9
TWI09G0208 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 1.1e-21 106.7 94 62.8
GSVIVG01021255001 Vitis vinifera HOM05D005007 ORTHO05D006053 1.8e-21 105.9 104 60.6
Sabra04G0040400 Salix brachista HOM05D005007 ORTHO05D006053 2.4e-21 105.5 94 57.4
Glyma.05G160900 Glycine max HOM05D005007 ORTHO05D006053 4.1e-21 104.8 87 64.4
Psat7g068680 Pisum sativum HOM05D005007 ORTHO05D006053 5.4e-21 104.4 84 61.9
Phvul.002G241000 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 7.0e-21 104.0 84 61.9
Manes.17G059100 Manihot esculenta HOM05D005007 ORTHO05D006053 1.2e-20 103.2 104 56.7
Medtr8g087320 Medicago truncatula HOM05D005007 ORTHO05D006053 1.2e-20 103.2 82 61.0
Glyma.08G118300 Glycine max HOM05D005007 ORTHO05D006053 1.6e-20 102.8 84 61.9
SalBow8G4395 Salvia bowleyana HOM05D005007 ORTHO05D006053 1.6e-20 102.8 85 58.8
TPR.G6805 Trifolium pratense HOM05D000213 ORTHO05D000426 7.8e-20 100.5 85 60.0
Actinidia39520 Actinidia chinensis HOM05D005007 ORTHO05D006053 1.0e-19 100.1 103 57.3
Cc02_g15570 Coffea canephora HOM05D005007 ORTHO05D006053 1.0e-19 100.1 111 55.0
DCAR_003989 Daucus carota HOM05D005007 ORTHO05D006053 3.8e-19 98.2 84 63.1
CSS0026874 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 5.0e-19 97.8 91 59.3
Atru.chr10.1572 Acer truncatum HOM05D005007 ORTHO05D006053 6.6e-19 97.4 125 48.0
MBI06_g18688_MAGBIO Magnolia biondii HOM05D005007 ORTHO05D006053 1.9e-18 95.9 86 58.1
PGR042G3787 Punica granatum HOM05D005007 ORTHO05D006053 1.9e-18 95.9 75 64.0
CiPaw.09G137100 Carya illinoinensis HOM05D005007 ORTHO05D006053 2.5e-18 95.5 105 51.4
Oeu060171.1 Olea europaea HOM05D005007 ORTHO05D006053 4.3e-18 94.7 109 52.3
Peaxi162Scf00202g00119 Petunia axillaris HOM05D005007 ORTHO05D006053 4.3e-18 94.7 101 55.4
Sabra11G0055100 Salix brachista HOM05D005007 ORTHO05D006053 4.3e-18 94.7 97 55.7
Haze_05357 Corylus avellana HOM05D005007 ORTHO05D006053 7.3e-18 94.0 73 61.6
QL05p049974 Quercus lobata HOM05D005007 ORTHO05D006053 7.3e-18 94.0 86 59.3
arahy.Tifrunner.gnm1.ann1.HJBU6U Arachis hypogaea HOM05D005007 ORTHO05D006053 9.5e-18 93.6 83 57.8
Nn3g21105 Nelumbo nucifera HOM05D005007 ORTHO05D006053 9.5e-18 93.6 98 61.2
CSS0021075 Camellia sinensis var. sinensis HOM05D005007 ORTHO05D006053 1.2e-17 93.2 99 55.6
HanXRQChr02g0038411 Helianthus annuus HOM05D005007 ORTHO05D006053 1.2e-17 93.2 81 60.5
AUR62039477 Chenopodium quinoa HOM05D005007 ORTHO05D006053 2.8e-17 92.0 94 48.9
Migut.H01413 Erythranthe guttata HOM05D005007 ORTHO05D006053 2.8e-17 92.0 79 55.7
Oeu039881.1 Olea europaea HOM05D005007 ORTHO05D006053 2.8e-17 92.0 85 56.5
DCAR_007938 Daucus carota HOM05D005007 ORTHO05D006053 3.6e-17 91.7 74 63.5
Gorai.009G160600 Gossypium raimondii HOM05D005007 ORTHO05D006053 3.6e-17 91.7 59 74.6
Lsat_1_v5_gn_7_25701 Lactuca sativa HOM05D005007 ORTHO05D006053 4.7e-17 91.3 71 64.8
Sed0011988 Sechium edule HOM05D005007 ORTHO05D006053 4.7e-17 91.3 102 49.0
BcaB04g18501 Brassica carinata HOM05D005007 ORTHO05D006053 6.1e-17 90.9 81 54.3
Cpa.g.sc7.108 Carica papaya HOM05D005007 ORTHO05D006053 8.0e-17 90.5 93 51.6
Sabra11G0058300 Salix brachista HOM05D005007 ORTHO05D006053 1.0e-16 90.1 101 49.5
SalBow7G2341 Salvia bowleyana HOM05D005007 ORTHO05D006053 1.4e-16 89.7 71 60.6
Thecc.07G118400 Theobroma cacao HOM05D005007 ORTHO05D006053 1.4e-16 89.7 105 50.5
Glyma.06G227850 Glycine max HOM05D005007 ORTHO05D006053 1.8e-16 89.4 102 49.0
Glyma.06G227900 Glycine max HOM05D005007 ORTHO05D006053 1.8e-16 89.4 102 49.0
Prupe.4G066600 Prunus persica HOM05D005007 ORTHO05D006053 1.8e-16 89.4 107 51.4
arahy.Tifrunner.gnm1.ann1.VZS9XU Arachis hypogaea HOM05D005007 ORTHO05D006053 2.3e-16 89.0 94 48.9
Migut.H01416 Erythranthe guttata HOM05D005007 ORTHO05D006053 3.0e-16 88.6 73 57.5
PGSC0003DMG400028468 Solanum tuberosum HOM05D005007 ORTHO05D006053 4.0e-16 88.2 102 51.0
Solyc02g072170.3 Solanum lycopersicum HOM05D005007 ORTHO05D006053 5.2e-16 87.8 106 50.9
MSTRG.7429 Avicennia marina HOM05D005007 ORTHO05D006053 6.8e-16 87.4 99 50.5
MD10G1275600 Malus domestica HOM05D005007 ORTHO05D006053 6.8e-16 87.4 95 55.8
RcHm_v2.0_Chr5g0011631 Rosa chinensis HOM05D005007 ORTHO05D006053 6.8e-16 87.4 78 55.1
CARHR225660 Cardamine hirsuta HOM05D005007 ORTHO05D006053 8.9e-16 87.0 81 48.1
MELO3C007199.2 Cucumis melo HOM05D005007 ORTHO05D006053 8.9e-16 87.0 81 50.6
Sopen02g021150 Solanum pennellii HOM05D005007 ORTHO05D006053 8.9e-16 87.0 106 50.9
ClCG01G023890 Citrullus lanatus HOM05D005007 ORTHO05D006053 1.5e-15 86.3 93 50.5
Glyma.12G156400 Glycine max HOM05D005007 ORTHO05D006053 1.5e-15 86.3 103 50.5
Rhsim06G0209000 Rhododendron simsii HOM05D005007 ORTHO05D006053 1.5e-15 86.3 81 56.8
CsaV3_6G051040 Cucumis sativus L. HOM05D005007 ORTHO05D006053 2.0e-15 85.9 81 50.6
Cpa.g.sc77.26 Carica papaya HOM05D005007 ORTHO05D006053 3.4e-15 85.1 100 50.0
Ciclev10022947m.g Citrus clementina HOM05D005007 ORTHO05D006053 3.4e-15 85.1 107 43.9
CiPaw.12G113100 Carya illinoinensis HOM05D005007 ORTHO05D006053 5.8e-15 84.3 107 50.5
MD00G1009400 Malus domestica HOM05D005007 ORTHO05D006053 5.8e-15 84.3 93 54.8
MD05G1295500 Malus domestica HOM05D005007 ORTHO05D006053 5.8e-15 84.3 93 54.8
Carub.0007s2243 Capsella rubella HOM05D005007 ORTHO05D006053 9.8e-15 83.6 97 46.4
Lalb_Chr03g0031211 Lupinus albus HOM05D005007 ORTHO05D006053 9.8e-15 83.6 103 43.7
Rhsim02G0146700 Rhododendron simsii HOM05D005007 ORTHO05D006053 9.8e-15 83.6 91 53.8
Sed0017213 Sechium edule HOM05D005007 ORTHO05D006053 1.3e-14 83.2 85 49.4
FvH4_3g07320 Fragaria vesca HOM05D005007 ORTHO05D006053 1.7e-14 82.8 111 53.2
QL08p025919 Quercus lobata HOM05D005007 ORTHO05D006053 1.7e-14 82.8 96 50.0
FAN11G0120 Fragaria x ananassa HOM05D005007 ORTHO05D006053 2.2e-14 82.4 111 53.2
Sp7g17510 Schrenkiella parvula HOM05D005007 ORTHO05D006053 2.2e-14 82.4 80 50.0
Phvul.011G165600 Phaseolus vulgaris HOM05D005007 ORTHO05D006053 2.9e-14 82.0 106 46.2
Sabra16G0257800 Salix brachista HOM05D005007 ORTHO05D006053 2.9e-14 82.0 86 55.8
Manes.15G095801 Manihot esculenta HOM05D005007 ORTHO05D006053 3.7e-14 81.6 87 48.3
Potri.001G393001 Populus trichocarpa HOM05D005007 ORTHO05D006053 3.7e-14 81.6 101 49.5
CDE10G0299 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 4.9e-14 81.3 82 52.4
Nitab4.5_0007471g0020 Nicotiana tabacum HOM05D005007 ORTHO05D006053 4.9e-14 81.3 87 52.9
COL.COLO4_17528 Corchorus olitorius HOM05D005007 ORTHO05D006053 6.4e-14 80.9 85 54.1
Actinidia35210 Actinidia chinensis HOM05D005007 ORTHO05D006053 8.3e-14 80.5 59 62.7
Ah.14g087010 Amaranthus hybridus HOM05D005007 ORTHO05D006053 8.3e-14 80.5 108 42.6
C03p81500 Brassica napus HOM05D005007 ORTHO05D006053 8.3e-14 80.5 71 56.3
BolC3t20421H Brassica oleracea HOM05D005007 ORTHO05D006053 8.3e-14 80.5 71 56.3
Haze_09314 Corylus avellana HOM05D005007 ORTHO05D006053 8.3e-14 80.5 78 52.6
Nitab4.5_0000437g0140 Nicotiana tabacum HOM05D005007 ORTHO05D006053 1.1e-13 80.1 87 52.9
HPP92_008753 Vanilla planifolia HOM05D005007 ORTHO05D006053 1.1e-13 80.1 101 48.5
BraA08t33391Z Brassica rapa HOM05D005007 ORTHO05D006053 1.4e-13 79.7 80 55.0
ECA236G3784 Erigeron canadensis HOM05D005007 ORTHO05D006053 1.4e-13 79.7 89 51.7
Actinidia16774 Actinidia chinensis HOM05D005007 ORTHO05D006053 1.8e-13 79.3 59 67.8
ClCG07G010220 Citrullus lanatus HOM05D005007 ORTHO05D006053 2.4e-13 79.0 82 53.7
Thhalv10027446m.g Eutrema salsugineum HOM05D005007 ORTHO05D006053 3.2e-13 78.6 90 45.6
FAN21G0366 Fragaria x ananassa HOM05D005007 ORTHO05D006053 4.1e-13 78.2 94 51.1
FAN25G2704 Fragaria x ananassa HOM05D005007 ORTHO05D006053 5.4e-13 77.8 105 50.5
TWI39G0558 Tripterygium wilfordii HOM05D005007 ORTHO05D006053 5.4e-13 77.8 86 54.7
RcHm_v2.0_Chr5g0030711 Rosa chinensis HOM05D005007 ORTHO05D006053 9.2e-13 77.0 73 58.9
Sed0025620 Sechium edule HOM05D005007 ORTHO05D006053 9.2e-13 77.0 100 48.0
Lalb_Chr01g0006861 Lupinus albus HOM05D005007 ORTHO05D006053 1.2e-12 76.6 101 43.6
Sc16g0007670 Simmondsia chinensis HOM05D005007 ORTHO05D006053 1.2e-12 76.6 80 46.2
Prupe.4G161500 Prunus persica HOM05D005007 ORTHO05D006053 1.6e-12 76.3 106 45.3
Aqoxy4G00249 Aquilegia oxysepala HOM05D005007 ORTHO05D006053 2.0e-12 75.9 80 52.5
VMungo1127G1862 Vigna mungo HOM05D005007 ORTHO05D006053 2.0e-12 75.9 99 46.5
FAN16G2723 Fragaria x ananassa HOM05D005007 ORTHO05D006053 3.5e-12 75.1 94 50.0
Eucgr.F01249 Eucalyptus grandis HOM05D005007 ORTHO05D006053 6.0e-12 74.3 102 45.1
ATR0012G015 Amborella trichopoda HOM05D005007 ORTHO05D006053 7.8e-12 73.9 100 43.0
vmacro11948 Vaccinium macrocarpon HOM05D005007 ORTHO05D006053 7.8e-12 73.9 78 53.8
MD11G1264800 Malus domestica HOM05D005007 ORTHO05D006053 1.0e-11 73.6 98 48.0
unitig_0.g744 Utricularia gibba HOM05D005007 ORTHO05D006053 1.7e-11 72.8 83 50.6
CANSAT35G0905 Cannabis sativa HOM05D005007 ORTHO05D006053 2.3e-11 72.4 56 60.7
Potri.001G389150 Populus trichocarpa HOM05D005007 ORTHO05D006053 2.3e-11 72.4 102 50.0
Ah.09g233580 Amaranthus hybridus HOM05D005007 ORTHO05D006053 3.0e-11 72.0 65 52.3
CiPaw.11G159400 Carya illinoinensis HOM05D005007 ORTHO05D006053 3.0e-11 72.0 99 49.5
Gohir.D01G042700 Gossypium hirsutum HOM05D005007 ORTHO05D006053 3.0e-11 72.0 72 54.2
Gorai.002G053600 Gossypium raimondii HOM05D005007 ORTHO05D006053 3.0e-11 72.0 72 54.2
Atru.chr2.2102 Acer truncatum HOM05D005007 ORTHO05D006053 3.9e-11 71.6 92 42.4
CsaV3_4G008110 Cucumis sativus L. HOM05D005007 ORTHO05D006053 6.6e-11 70.9 65 56.9
DCAR_005144 Daucus carota HOM05D005007 ORTHO05D006053 6.6e-11 70.9 81 53.1
Lsat_1_v5_gn_5_126541 Lactuca sativa HOM05D005007 ORTHO05D006053 1.1e-10 70.1 96 46.9
EL10Ac4g08365 Beta vulgaris HOM05D005007 ORTHO05D006053 1.5e-10 69.7 63 52.4
Gohir.A01G053200 Gossypium hirsutum HOM05D005007 ORTHO05D006053 1.9e-10 69.3 72 52.8
Actinidia18804 Actinidia chinensis HOM05D005007 ORTHO05D006053 3.3e-10 68.6 48 64.6
arahy.Tifrunner.gnm1.ann1.G1B0F8 Arachis hypogaea HOM05D005007 ORTHO05D006053 3.3e-10 68.6 78 50.0
Sabra11G0096200 Salix brachista HOM05D005007 ORTHO05D006053 9.5e-10 67.0 68 52.9
Nn6g34499 Nelumbo nucifera HOM05D005007 ORTHO05D006053 4.7e-09 64.7 101 46.5
Migut.M00716 Erythranthe guttata HOM05D005007 ORTHO05D006053 1.1e-08 63.5 60 55.0
Potri.011G108700 Populus trichocarpa HOM05D005007 ORTHO05D006053 1.4e-08 63.2 75 50.7
Peaxi162Scf00111g01466 Petunia axillaris HOM05D005007 ORTHO05D006053 2.3e-08 62.4 70 48.6
SGA_v2.0_scaffold181G39748 Striga asiatica HOM05D002453 ORTHO05D008746 5.2e-08 61.2 41 65.9
CDE10G1215 Ceratophyllum demersum HOM05D005007 ORTHO05D006053 6.8e-08 60.8 41 65.9
PGSC0003DMG400044408 Solanum tuberosum HOM05D005007 ORTHO05D006053 1.5e-07 59.7 67 52.2
Os02g0234700 Oryza sativa ssp. japonica HOM05D005007 ORTHO05D006053 9.8e-07 57.0 106 40.6
Eucgr.D00467 Eucalyptus grandis HOM05D005007 ORTHO05D006053 2.2e-06 55.8 73 42.5


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