Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A06G098502 Gossypium hirsutum HOM05D003082 ORTHO05D003497 4.2e-43 177.6 86 100.0
Gorai.010G115700 Gossypium raimondii HOM05D003082 ORTHO05D003497 1.5e-27 125.9 81 80.2
Gohir.D09G237000 Gossypium hirsutum HOM05D003082 ORTHO05D003497 2.5e-19 98.6 82 68.3
Gohir.D06G100650 Gossypium hirsutum HOM05D003082 ORTHO05D003497 4.7e-18 94.4 65 76.9
Gorai.006G260000 Gossypium raimondii HOM05D003082 ORTHO05D003497 7.5e-16 87.0 127 45.7
Duzib052G0144 Durio zibethinus HOM05D003082 ORTHO05D003497 8.0e-10 67.0 38 81.6
Duzib151G0431 Durio zibethinus HOM05D003082 ORTHO05D003497 8.0e-10 67.0 38 81.6
Gohir.A02G051600 Gossypium hirsutum HOM05D003082 ORTHO05D003497 8.0e-10 67.0 33 93.9
Gohir.D02G056500 Gossypium hirsutum HOM05D003082 ORTHO05D003497 8.0e-10 67.0 33 93.9
Gorai.005G062400 Gossypium raimondii HOM05D003082 ORTHO05D003497 8.0e-10 67.0 33 93.9
EL10Ac6g15380 Beta vulgaris HOM05D003082 ORTHO05D003497 1.8e-09 65.9 33 90.9
Duzib212G0528 Durio zibethinus HOM05D003082 ORTHO05D003497 4.0e-09 64.7 33 87.9
SGA_v2.0_scaffold7G03956 Striga asiatica HOM05D003082 ORTHO05D003497 5.2e-09 64.3 33 87.9
ClCG01G008760 Citrullus lanatus HOM05D003082 ORTHO05D003497 6.8e-09 63.9 33 87.9
CsaV3_5G024250 Cucumis sativus L. HOM05D003082 ORTHO05D003497 6.8e-09 63.9 33 87.9
SGA_v2.0_scaffold114G31974 Striga asiatica HOM05D003082 ORTHO05D003497 6.8e-09 63.9 33 87.9
AUR62007100 Chenopodium quinoa HOM05D003082 ORTHO05D003497 8.9e-09 63.5 33 84.8
AUR62019963 Chenopodium quinoa HOM05D003082 ORTHO05D003497 8.9e-09 63.5 33 84.8
MELO3C025123.2 Cucumis melo HOM05D003082 ORTHO05D003497 8.9e-09 63.5 33 87.9
Nn2g12687 Nelumbo nucifera HOM05D003082 ORTHO05D003497 1.2e-08 63.2 33 84.8
Hund04328 Selenicereus undatus HOM05D003082 ORTHO05D003497 1.2e-08 63.2 33 84.8
Thecc.04G291800 Theobroma cacao HOM05D003082 ORTHO05D003497 1.5e-08 62.8 33 84.8
Gohir.A10G167800 Gossypium hirsutum HOM05D003082 ORTHO05D003497 2.0e-08 62.4 33 84.8
Gohir.D10G173900 Gossypium hirsutum HOM05D003082 ORTHO05D003497 2.0e-08 62.4 33 84.8
Gorai.011G194600 Gossypium raimondii HOM05D003082 ORTHO05D003497 2.0e-08 62.4 33 84.8
Hma1.2p1_0331F.1_g127550 Hydrangea macrophylla HOM05D003082 ORTHO05D003497 2.0e-08 62.4 33 84.8
CANSAT01G2338 Cannabis sativa HOM05D003082 ORTHO05D003497 2.6e-08 62.0 33 84.8
Nn7g36916 Nelumbo nucifera HOM05D003082 ORTHO05D003497 2.6e-08 62.0 33 81.8
Oeu053940.1 Olea europaea HOM05D003082 ORTHO05D003497 2.6e-08 62.0 33 81.8
COL.COLO4_34689 Corchorus olitorius HOM05D003082 ORTHO05D003497 4.4e-08 61.2 34 88.2
PGR042G1487 Punica granatum HOM05D003082 ORTHO05D003497 4.4e-08 61.2 33 84.8
Migut.H01515 Erythranthe guttata HOM05D003082 ORTHO05D003497 5.7e-08 60.8 33 81.8
Manes.06G016100 Manihot esculenta HOM05D003082 ORTHO05D003497 5.7e-08 60.8 33 81.8
Oeu038230.1 Olea europaea HOM05D003082 ORTHO05D003497 5.7e-08 60.8 33 78.8
Prupe.5G027300 Prunus persica HOM05D003082 ORTHO05D003497 5.7e-08 60.8 33 81.8
GSVIVG01000052001 Vitis vinifera HOM05D003082 ORTHO05D003497 5.7e-08 60.8 33 78.8
Migut.M01208 Erythranthe guttata HOM05D003082 ORTHO05D003497 7.5e-08 60.5 33 81.8
Sabra17G0112200 Salix brachista HOM05D003082 ORTHO05D003497 7.5e-08 60.5 38 71.1
CiPaw.06G015400 Carya illinoinensis HOM05D003082 ORTHO05D003497 9.8e-08 60.1 33 81.8
TWI74G0632 Tripterygium wilfordii HOM05D003082 ORTHO05D003497 9.8e-08 60.1 33 81.8
Atru.chr1.1952 Acer truncatum HOM05D003082 ORTHO05D003497 1.3e-07 59.7 33 81.8
MSTRG.13183 Avicennia marina HOM05D003082 ORTHO05D003497 1.3e-07 59.7 33 78.8
MSTRG.7294 Avicennia marina HOM05D003082 ORTHO05D003497 1.3e-07 59.7 33 78.8
Cc02_g12480 Coffea canephora HOM05D003082 ORTHO05D003497 1.3e-07 59.7 33 81.8
Eucgr.F02897 Eucalyptus grandis HOM05D003082 ORTHO05D003497 1.3e-07 59.7 33 78.8
Lj6P692T22 Lonicera japonica HOM05D003082 ORTHO05D003497 1.3e-07 59.7 33 78.8
Sed0014317 Sechium edule HOM05D003082 ORTHO05D003497 1.3e-07 59.7 33 78.8
TAR622G0065 Trochodendron aralioides HOM05D003082 ORTHO05D003497 1.3e-07 59.7 38 73.7
Aqoxy3G02868 Aquilegia oxysepala HOM05D003082 ORTHO05D003497 1.7e-07 59.3 33 81.8
MSTRG.15930 Avicennia marina HOM05D003082 ORTHO05D003497 1.7e-07 59.3 33 81.8
Dinv06240 Davidia involucrata HOM05D003082 ORTHO05D003497 1.7e-07 59.3 33 78.8
Dinv20511 Davidia involucrata HOM05D003082 ORTHO05D003497 1.7e-07 59.3 38 68.4
Dinv20531 Davidia involucrata HOM05D003082 ORTHO05D003497 1.7e-07 59.3 38 68.4
Sed0024856 Sechium edule HOM05D003082 ORTHO05D003497 1.7e-07 59.3 33 78.8
Lj3A832G16 Lonicera japonica HOM05D003082 ORTHO05D003497 2.2e-07 58.9 33 78.8
QL02p059987 Quercus lobata HOM05D003082 ORTHO05D003497 2.2e-07 58.9 33 78.8
QL07p034910 Quercus lobata HOM05D003082 ORTHO05D003497 2.2e-07 58.9 33 78.8
SalBow8G1240 Salvia bowleyana HOM05D003082 ORTHO05D003497 2.2e-07 58.9 33 78.8
Haze_14301 Corylus avellana HOM05D003082 ORTHO05D003497 2.8e-07 58.5 33 78.8
ECA238G3678 Erigeron canadensis HOM05D003082 ORTHO05D003497 2.8e-07 58.5 34 82.4
Gohir.A09G236200 Gossypium hirsutum HOM05D003082 ORTHO05D003497 2.8e-07 58.5 33 78.8
Hma1.2p1_0127F.1_g059670 Hydrangea macrophylla HOM05D003082 ORTHO05D003497 2.8e-07 58.5 33 78.8
Peaxi162Scf00299g00531 Petunia axillaris HOM05D003082 ORTHO05D003497 2.8e-07 58.5 34 82.4
Sc14g0006870 Simmondsia chinensis HOM05D003082 ORTHO05D003497 2.8e-07 58.5 33 75.8
TWI15G0329 Tripterygium wilfordii HOM05D003082 ORTHO05D003497 2.8e-07 58.5 33 75.8
ATR0743G023 Amborella trichopoda HOM05D003082 ORTHO05D003497 3.7e-07 58.2 33 75.8
Oeu043695.1 Olea europaea HOM05D003082 ORTHO05D003497 3.7e-07 58.2 33 78.8
Potri.017G138300 Populus trichocarpa HOM05D003082 ORTHO05D003497 3.7e-07 58.2 33 75.8
Sabra17G0112800 Salix brachista HOM05D003082 ORTHO05D003497 3.7e-07 58.2 38 68.4
TAR374G0282 Trochodendron aralioides HOM05D003082 ORTHO05D003497 3.7e-07 58.2 33 78.8
Atru.chr9.1638 Acer truncatum HOM05D003082 ORTHO05D003497 4.9e-07 57.8 33 75.8
Solyc02g079060.3 Solanum lycopersicum HOM05D003082 ORTHO05D003497 4.9e-07 57.8 34 82.4
Sopen02g023870 Solanum pennellii HOM05D003082 ORTHO05D003497 4.9e-07 57.8 34 82.4
PGSC0003DMG400022359 Solanum tuberosum HOM05D003082 ORTHO05D003497 4.9e-07 57.8 34 82.4
TWI60G0785 Tripterygium wilfordii HOM05D003082 ORTHO05D003497 6.3e-07 57.4 33 72.7
Ciclev10002394m.g Citrus clementina HOM05D003082 ORTHO05D003497 8.3e-07 57.0 33 78.8
PSO063G3459 Papaver somniferum HOM05D003082 ORTHO05D003497 8.3e-07 57.0 33 75.8
PSO170G2980 Papaver somniferum HOM05D003082 ORTHO05D003497 8.3e-07 57.0 33 75.8
unitig_46.g18626 Utricularia gibba HOM05D003082 ORTHO05D003497 8.3e-07 57.0 33 72.7
Cpa.g.sc178.2 Carica papaya HOM05D003082 ORTHO05D003497 1.1e-06 56.6 33 75.8
CiPaw.05G244300 Carya illinoinensis HOM05D003082 ORTHO05D003497 1.1e-06 56.6 33 75.8
Peaxi162Scf00588g01011 Petunia axillaris HOM05D003082 ORTHO05D003497 1.1e-06 56.6 34 79.4
QL01p029277 Quercus lobata HOM05D003082 ORTHO05D003497 1.1e-06 56.6 33 72.7
Aqoxy5G04053 Aquilegia oxysepala HOM05D003082 ORTHO05D003497 1.4e-06 56.2 33 75.8
CSS0037921 Camellia sinensis var. sinensis HOM05D003082 ORTHO05D003497 1.4e-06 56.2 35 68.6
Nitab4.5_0003465g0050 Nicotiana tabacum HOM05D003082 ORTHO05D003497 1.4e-06 56.2 34 79.4
Nitab4.5_0012269g0010 Nicotiana tabacum HOM05D003082 ORTHO05D003497 1.4e-06 56.2 34 79.4
HanXRQChr04g0109401 Helianthus annuus HOM05D003082 ORTHO05D003497 1.8e-06 55.8 34 79.4
Sabra17G0112500 Salix brachista HOM05D003082 ORTHO05D003497 1.8e-06 55.8 33 75.8
AUR62003505 Chenopodium quinoa HOM05D003082 ORTHO05D003497 2.4e-06 55.5 35 71.4
Sabra17G0115000 Salix brachista HOM05D003082 ORTHO05D003497 2.4e-06 55.5 33 72.7
HanXRQChr14g0432091 Helianthus annuus HOM05D003082 ORTHO05D003497 3.1e-06 55.1 34 76.5
Lsat_1_v5_gn_2_38821 Lactuca sativa HOM05D003082 ORTHO05D003497 3.1e-06 55.1 34 76.5
Nitab4.5_0000190g0170 Nicotiana tabacum HOM05D003082 ORTHO05D003497 3.1e-06 55.1 34 76.5
Nitab4.5_0003574g0100 Nicotiana tabacum HOM05D003082 ORTHO05D003497 3.1e-06 55.1 34 76.5
PSO135G0099 Papaver somniferum HOM05D003082 ORTHO05D003497 3.1e-06 55.1 38 65.8
PSO384G2055 Papaver somniferum HOM05D003082 ORTHO05D003497 3.1e-06 55.1 38 65.8
unitig_37.g12337 Utricularia gibba HOM05D006195 ORTHO05D007710 3.1e-06 55.1 33 69.7
HanXRQChr17g0547371 Helianthus annuus HOM05D003082 ORTHO05D003497 4.1e-06 54.7 34 79.4
HanXRQChr17g0547381 Helianthus annuus HOM05D003082 ORTHO05D003497 4.1e-06 54.7 34 79.4
MBI03_g35442_MAGBIO Magnolia biondii HOM05D003082 ORTHO05D003497 4.1e-06 54.7 33 72.7
MD16G1279500 Malus domestica HOM05D003082 ORTHO05D003497 4.1e-06 54.7 33 78.8
FvH4_5g23100 Fragaria vesca HOM05D003082 ORTHO05D003497 5.4e-06 54.3 33 69.7
FAN04G2030 Fragaria x ananassa HOM05D003082 ORTHO05D003497 5.4e-06 54.3 33 69.7
FAN08G1589 Fragaria x ananassa HOM05D003082 ORTHO05D003497 5.4e-06 54.3 33 69.7
FAN13G0663 Fragaria x ananassa HOM05D003082 ORTHO05D003497 5.4e-06 54.3 33 69.7
FAN13G1153 Fragaria x ananassa HOM05D003082 ORTHO05D003497 5.4e-06 54.3 33 69.7
FAN18G1653 Fragaria x ananassa HOM05D003082 ORTHO05D003497 5.4e-06 54.3 33 69.7
FAN18G4367 Fragaria x ananassa HOM05D003082 ORTHO05D003497 5.4e-06 54.3 33 69.7
MD06G1026500 Malus domestica HOM05D003082 ORTHO05D003497 7.0e-06 53.9 33 72.7
TWI81G0860 Tripterygium wilfordii HOM05D003082 ORTHO05D003497 9.2e-06 53.5 33 69.7


User provided reference genes

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