Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A06G080250 Gossypium hirsutum HOM05D000205 ORTHO05D001133 6.7e-51 203.8 105 100.0
Gohir.A10G140800 Gossypium hirsutum HOM05D000205 ORTHO05D001133 4.7e-20 101.3 57 93.0
COL.COLO4_34821 Corchorus olitorius HOM05D000205 ORTHO05D001133 7.0e-08 60.8 32 93.8
Gohir.A05G024400 Gossypium hirsutum HOM05D000205 ORTHO05D001133 7.0e-08 60.8 32 93.8
Gohir.D05G025900 Gossypium hirsutum HOM05D000205 ORTHO05D001133 7.0e-08 60.8 32 93.8
Gorai.009G026000 Gossypium raimondii HOM05D000205 ORTHO05D001133 7.0e-08 60.8 32 93.8
MBI04_g04848_MAGBIO Magnolia biondii HOM05D000205 ORTHO05D001133 1.2e-07 60.1 40 72.5
Gohir.A13G196500 Gossypium hirsutum HOM05D000205 ORTHO05D001133 1.6e-07 59.7 32 90.6
Gohir.D13G201800 Gossypium hirsutum HOM05D000205 ORTHO05D001133 1.6e-07 59.7 32 90.6
Thecc.09G107000 Theobroma cacao HOM05D000205 ORTHO05D001133 1.6e-07 59.7 32 90.6
Duzib168G0599 Durio zibethinus HOM05D000205 ORTHO05D001133 2.0e-07 59.3 30 96.7
Gorai.013G230700 Gossypium raimondii HOM05D000205 ORTHO05D001133 3.5e-07 58.5 32 87.5
Duzib150G0416 Durio zibethinus HOM05D000205 ORTHO05D001133 4.5e-07 58.2 32 90.6
QL02p046110 Quercus lobata HOM05D000205 ORTHO05D001133 1.0e-06 57.0 30 93.3
Ciclev10008115m.g Citrus clementina HOM05D000205 ORTHO05D001133 1.3e-06 56.6 32 87.5
CANSAT02G0012 Cannabis sativa HOM05D000205 ORTHO05D001133 2.3e-06 55.8 32 87.5
Manes.03G023200 Manihot esculenta HOM05D000205 ORTHO05D001133 2.3e-06 55.8 30 90.0
Sc08g0007650 Simmondsia chinensis HOM05D000205 ORTHO05D001133 2.3e-06 55.8 30 90.0
TAR626G1018 Trochodendron aralioides HOM05D000205 ORTHO05D001133 2.3e-06 55.8 32 81.2
MD02G1042800 Malus domestica HOM05D000205 ORTHO05D001133 2.9e-06 55.5 32 84.4
MD15G1181400 Malus domestica HOM05D000205 ORTHO05D001133 2.9e-06 55.5 34 79.4
Dinv41625 Davidia involucrata HOM05D000205 ORTHO05D001133 3.8e-06 55.1 32 81.2
Glyma.07G084400 Glycine max HOM05D000205 ORTHO05D001133 3.8e-06 55.1 32 84.4
Hma1.2p1_1195F.1_g265860 Hydrangea macrophylla HOM05D000205 ORTHO05D001133 3.8e-06 55.1 37 75.7
Lj2g0012789 Lotus japonicus HOM05D000205 ORTHO05D001133 3.8e-06 55.1 32 84.4
MBI01_g30857_MAGBIO Magnolia biondii HOM05D000205 ORTHO05D001133 3.8e-06 55.1 30 86.7
TPR.G35111 Trifolium pratense HOM05D000205 ORTHO05D001133 3.8e-06 55.1 32 84.4
VMungo0464G1310 Vigna mungo HOM05D000205 ORTHO05D001133 3.8e-06 55.1 32 84.4
CSS0011119 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D001133 5.0e-06 54.7 32 81.2
CSS0025523 Camellia sinensis var. sinensis HOM05D000205 ORTHO05D001133 5.0e-06 54.7 32 81.2
PGR102G2631 Punica granatum HOM05D000205 ORTHO05D001133 5.0e-06 54.7 32 84.4
Actinidia08994 Actinidia chinensis HOM05D000205 ORTHO05D001133 6.6e-06 54.3 30 86.7
AL2G25820 Arabidopsis lyrata HOM05D000205 ORTHO05D001133 6.6e-06 54.3 32 81.2
Carub.0002s1358 Capsella rubella HOM05D000205 ORTHO05D001133 6.6e-06 54.3 32 81.2
Ca_25541_v3 Cicer arietinum L. HOM05D000205 ORTHO05D001133 6.6e-06 54.3 30 86.7
Rhsim12G0200500 Rhododendron simsii HOM05D000205 ORTHO05D001133 6.6e-06 54.3 32 81.2
Sp5g22240 Schrenkiella parvula HOM05D000205 ORTHO05D001133 6.6e-06 54.3 32 81.2
TAR624G0886 Trochodendron aralioides HOM05D000205 ORTHO05D001133 6.6e-06 54.3 32 81.2
CDE08G1510 Ceratophyllum demersum HOM05D000205 ORTHO05D001133 8.6e-06 53.9 35 71.4
FvH4_1g04310 Fragaria vesca HOM05D000205 ORTHO05D001133 8.6e-06 53.9 32 78.1
FAN19G3141 Fragaria x ananassa HOM05D000205 ORTHO05D001133 8.6e-06 53.9 32 78.1
FAN23G2386 Fragaria x ananassa HOM05D000205 ORTHO05D001133 8.6e-06 53.9 32 78.1
FAN28G0773 Fragaria x ananassa HOM05D000205 ORTHO05D001133 8.6e-06 53.9 32 78.1
Glyma.09G192500 Glycine max HOM05D000205 ORTHO05D001133 8.6e-06 53.9 32 84.4
Hma1.2p1_1463F.1_g285200 Hydrangea macrophylla HOM05D000205 ORTHO05D001133 8.6e-06 53.9 32 81.2
Potri.018G083200 Populus trichocarpa HOM05D000205 ORTHO05D001133 8.6e-06 53.9 32 81.2


User provided reference genes

Program Settings