Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 6.9e-147 523.9 249 100.0
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.1e-135 485.7 241 95.9
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 2.1e-135 485.7 241 95.9
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 5.0e-129 464.5 241 90.0
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 8.2e-124 447.2 248 83.9
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 1.8e-123 446.0 238 87.0
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 2.4e-123 445.7 248 83.9
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 3.1e-123 445.3 241 86.3
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 7.0e-123 444.1 238 87.0
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 1.2e-122 443.4 238 87.0
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 3.5e-122 441.8 248 83.5
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 1.7e-121 439.5 239 86.6
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 1.7e-121 439.5 248 83.1
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 1.1e-120 436.8 241 83.0
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.5e-120 435.6 245 83.3
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 4.2e-120 434.9 238 83.6
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 7.2e-120 434.1 238 83.6
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 2.1e-119 432.6 241 82.6
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 3.6e-119 431.8 241 83.0
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 6.1e-119 431.0 241 80.9
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 1.4e-118 429.9 241 82.2
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.3e-118 429.1 238 82.4
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 5.2e-118 427.9 239 83.7
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 5.2e-118 427.9 238 82.8
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 6.8e-118 427.6 241 82.2
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 1.5e-117 426.4 241 81.7
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 1.5e-117 426.4 241 80.5
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 1.5e-117 426.4 241 80.1
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 3.4e-117 425.2 241 80.9
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 4.4e-117 424.9 230 84.3
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 3.7e-116 421.8 241 77.6
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.4e-115 419.9 241 78.8
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 2.4e-115 419.1 238 80.7
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 2.4e-115 419.1 241 85.1
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.4e-115 419.1 243 76.1
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 3.1e-115 418.7 241 77.2
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 4.1e-115 418.3 236 80.9
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.0e-113 413.7 241 78.4
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 1.0e-113 413.7 241 78.4
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 2.3e-113 412.5 238 79.0
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 2.3e-113 412.5 241 78.0
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 2.9e-113 412.1 241 76.8
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 3.8e-113 411.8 238 79.0
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 3.8e-113 411.8 238 79.0
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 6.5e-113 411.0 238 79.0
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 1.5e-112 409.8 238 78.2
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 2.5e-112 409.1 238 78.6
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 3.2e-112 408.7 235 80.9
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 4.2e-112 408.3 238 78.6
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 4.2e-112 408.3 241 78.0
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 5.5e-112 407.9 238 78.6
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 9.5e-112 407.1 242 77.7
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.2e-111 406.8 239 78.2
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 3.6e-111 405.2 228 77.6
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 4.7e-111 404.8 238 78.2
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 6.1e-111 404.4 241 75.9
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 8.0e-111 404.1 242 77.3
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 8.0e-111 404.1 234 77.8
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 8.0e-111 404.1 238 78.2
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 1.0e-110 403.7 228 78.9
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 4.0e-110 401.7 241 75.9
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 5.2e-110 401.4 238 79.0
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 8.8e-110 400.6 229 77.7
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.0e-109 399.4 234 76.1
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 2.6e-109 399.1 234 76.5
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 3.4e-109 398.7 226 78.3
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 7.5e-109 397.5 241 75.1
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 1.3e-108 396.7 234 76.1
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 1.7e-108 396.4 253 75.9
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 4.9e-108 394.8 241 74.7
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 1.1e-107 393.7 238 75.6
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.4e-107 393.3 236 75.8
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 1.6e-106 389.8 236 76.3
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 2.9e-105 385.6 228 75.9
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 8.6e-105 384.0 228 74.6
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 1.9e-104 382.9 241 72.6
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 4.3e-104 381.7 235 72.8
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.1e-103 379.4 236 71.6
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 2.1e-103 379.4 236 72.0
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.4e-102 376.7 228 74.6
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 4.4e-101 371.7 241 67.6
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 2.9e-100 369.0 235 68.1
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 7.0e-99 364.4 234 71.8
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 1.3e-97 360.1 228 68.9
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 2.1e-95 352.8 226 69.0
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 2.8e-95 352.4 241 65.6
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 2.8e-95 352.4 241 65.6
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 1.8e-94 349.7 241 65.1
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 2.3e-94 349.4 241 65.6
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 6.2e-87 324.7 236 65.7
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 2.3e-86 322.8 239 61.9
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 8.9e-86 320.9 165 86.1
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 8.9e-86 320.9 235 61.7
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 7.5e-85 317.8 220 64.1
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 2.1e-82 309.7 166 81.9
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 1.3e-81 307.0 167 82.6
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 7.3e-80 301.2 236 57.6
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 2.1e-79 299.7 167 79.0
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.1e-79 299.7 217 62.2
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 2.8e-79 299.3 165 80.0
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 8.1e-79 297.7 228 57.0
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.5e-77 293.5 235 61.3
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 7.1e-75 284.6 220 57.3
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 1.1e-67 260.8 165 71.5
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 9.9e-61 237.7 122 88.5
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.9e-56 223.4 222 47.7
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 2.7e-50 203.0 109 80.7
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 1.6e-47 193.7 110 80.9
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 2.9e-44 183.0 139 56.8
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 6.3e-39 165.2 256 35.5
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 6.5e-36 155.2 199 42.7
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 2.5e-32 143.3 109 57.8
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 8.2e-31 138.3 84 77.4
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 2.0e-29 133.7 73 79.5
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.6e-26 124.0 218 31.7
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 8.8e-25 118.2 68 69.1
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 3.7e-23 112.8 73 75.3
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 1.6e-13 80.9 61 62.3
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 5.9e-13 79.0 43 81.4
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 6.7e-09 65.5 36 77.8
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 6.3e-07 58.9 39 64.1


User provided reference genes

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