Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A06G044600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.6e-193 679.1 313 100.0
Gohir.A11G324800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.2e-159 566.6 317 84.5
Gohir.A06G047400 Gossypium hirsutum HOM05D009781 ORTHO05D011819 5.8e-159 564.3 317 83.9
Gohir.D06G037800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 9.6e-154 547.0 314 84.1
Gohir.D08G028000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.1e-153 545.8 316 83.2
Gohir.D06G036500 Gossypium hirsutum HOM05D009781 ORTHO05D011819 2.5e-146 522.3 317 80.8
Gorai.010G040800 Gossypium raimondii HOM05D009781 ORTHO05D011819 2.5e-146 522.3 317 80.8
Gohir.D06G038800 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.8e-145 518.1 317 79.2
Gorai.010G041400 Gossypium raimondii HOM05D009781 ORTHO05D011819 3.4e-143 511.9 317 78.2
Gohir.D06G036900 Gossypium hirsutum HOM05D009781 ORTHO05D011819 7.6e-143 510.8 317 78.2
Gohir.A06G038742 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.3e-138 495.4 317 76.3
Gohir.A06G037300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.8e-134 481.9 317 75.1
Gohir.D06G038600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 3.0e-131 472.2 302 76.2
Gorai.010G041700 Gossypium raimondii HOM05D009781 ORTHO05D011819 4.3e-130 468.4 313 74.4
Gorai.002G247600 Gossypium raimondii HOM05D009781 ORTHO05D011819 2.2e-113 412.9 280 74.3
Gohir.A06G038600 Gossypium hirsutum HOM05D009781 ORTHO05D011819 9.4e-101 370.9 222 78.8
Gohir.A06G038813 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.4e-90 335.5 189 84.7
Gohir.D06G026000 Gossypium hirsutum HOM05D009781 ORTHO05D011819 8.9e-67 258.1 310 48.4
Gohir.D06G028300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 8.3e-65 251.5 310 47.4
Gohir.D06G025700 Gossypium hirsutum HOM05D009781 ORTHO05D011819 1.1e-64 251.1 309 46.9
Gohir.D06G027100 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.1e-64 249.2 309 47.2
Gohir.A06G029200 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.0e-59 232.6 309 46.0
Gohir.A06G044300 Gossypium hirsutum HOM05D009781 ORTHO05D011819 4.9e-49 199.1 130 72.3
Thecc.07G157200 Theobroma cacao HOM05D009781 ORTHO05D011819 1.6e-44 184.1 284 37.3
COL.COLO4_05074 Corchorus olitorius HOM05D009781 ORTHO05D011819 7.4e-37 158.7 285 34.7
COL.COLO4_09257 Corchorus olitorius HOM05D009781 ORTHO05D011819 7.6e-26 122.1 278 32.4
DCAR_028460 Daucus carota HOM05D019862 ORTHO05D011819 2.3e-14 84.0 138 38.4
COL.COLO4_31368 Corchorus olitorius HOM05D017380 ORTHO05D019049 3.0e-14 83.6 225 28.0
COL.COLO4_31293 Corchorus olitorius HOM05D001422 ORTHO05D001321 4.3e-13 79.7 283 26.5
COL.COLO4_31291 Corchorus olitorius HOM05D017380 ORTHO05D019049 9.7e-13 78.6 236 28.4
Ah.04g152890 Amaranthus hybridus HOM05D019862 ORTHO05D015815 8.2e-12 75.5 167 29.3
Ah.04g152910 Amaranthus hybridus HOM05D019862 ORTHO05D015815 8.2e-12 75.5 167 29.3
Ah.04g152960 Amaranthus hybridus HOM05D019862 ORTHO05D015815 1.5e-10 71.2 149 28.2
Ah.04g153140 Amaranthus hybridus HOM05D019862 ORTHO05D015815 1.5e-10 71.2 149 28.2
AUR62040278 Chenopodium quinoa HOM05D018784 ORTHO05D024979 5.9e-10 69.3 220 29.5
AUR62044727 Chenopodium quinoa HOM05D018784 ORTHO05D024979 5.9e-10 69.3 220 29.5
AUR62038282 Chenopodium quinoa HOM05D018784 ORTHO05D024979 8.5e-09 65.5 201 30.3
CSS0020144 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 1.9e-08 64.3 176 29.5
CSS0042303 Camellia sinensis var. sinensis HOM05D028518 ORTHO05D013819 1.9e-08 64.3 187 28.3
CARHR210300 Cardamine hirsuta HOM05D000249 ORTHO05D000206 3.2e-08 63.5 107 37.4
Haze_15512 Corylus avellana HOM05D000163 ORTHO05D000962 1.4e-06 58.2 121 31.4
QL11p055392 Quercus lobata HOM05D010066 ORTHO05D009743 1.8e-06 57.8 125 30.4
CSS0029553 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D013046 3.9e-06 56.6 211 27.0


User provided reference genes

Program Settings