Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A05G349600 Gossypium hirsutum HOM05D007860 ORTHO05D009950 7.6e-29 129.8 65 100.0
Gohir.D04G062700 Gossypium hirsutum HOM05D007860 ORTHO05D009950 2.4e-27 124.8 65 95.4
Gorai.012G070100 Gossypium raimondii HOM05D007860 ORTHO05D009950 2.4e-27 124.8 65 95.4
Gohir.A07G000500 Gossypium hirsutum HOM05D007860 ORTHO05D009950 2.7e-26 121.3 65 92.3
Thecc.10G043200 Theobroma cacao HOM05D007860 ORTHO05D009950 8.1e-23 109.8 61 85.2
COL.COLO4_15031 Corchorus olitorius HOM05D007860 ORTHO05D009950 5.8e-21 103.6 66 78.8
Sabra10G0157800 Salix brachista HOM05D007860 ORTHO05D009950 3.2e-19 97.8 63 73.0
Cfa009596 Carpinus fangiana HOM05D007860 ORTHO05D009950 4.2e-19 97.4 58 77.6
Manes.09G185000 Manihot esculenta HOM05D007860 ORTHO05D009950 2.7e-18 94.7 63 73.0
Glyma.18G290700 Glycine max HOM05D007860 ORTHO05D009950 4.6e-18 94.0 57 75.4
CiPaw.01G285600 Carya illinoinensis HOM05D007860 ORTHO05D009950 6.0e-18 93.6 59 72.9
Cc00_g31060 Coffea canephora HOM05D007860 ORTHO05D009950 7.9e-18 93.2 58 72.4
TWI63G0334 Tripterygium wilfordii HOM05D007860 ORTHO05D009950 7.9e-18 93.2 58 77.6
Glyma.02G092000 Glycine max HOM05D007860 ORTHO05D009950 1.3e-17 92.4 65 70.8
Cc02_g07910 Coffea canephora HOM05D007860 ORTHO05D009950 2.3e-17 91.7 58 70.7
TPR.G1333 Trifolium pratense HOM05D007860 ORTHO05D009950 3.0e-17 91.3 57 73.7
RcHm_v2.0_Chr4g0445811 Rosa chinensis HOM05D007860 ORTHO05D009950 3.9e-17 90.9 65 70.8
SalBow8G2293 Salvia bowleyana HOM05D007860 ORTHO05D009950 3.9e-17 90.9 58 70.7
CiPaw.01G286200 Carya illinoinensis HOM05D007860 ORTHO05D009950 5.1e-17 90.5 58 70.7
Lj1g0016082 Lotus japonicus HOM05D007860 ORTHO05D009950 5.1e-17 90.5 58 74.1
Peaxi162Scf00760g00224 Petunia axillaris HOM05D007860 ORTHO05D009950 5.1e-17 90.5 58 72.4
Potri.010G204200 Populus trichocarpa HOM05D007860 ORTHO05D009950 5.1e-17 90.5 63 69.8
THA.LOC104817766 Tarenaya hassleriana HOM05D007860 ORTHO05D009950 5.1e-17 90.5 61 72.1
Nn4g22694 Nelumbo nucifera HOM05D007860 ORTHO05D009950 8.7e-17 89.7 65 72.3
Solyc04g150108.1 Solanum lycopersicum HOM05D007860 ORTHO05D009950 8.7e-17 89.7 61 67.2
PGSC0003DMG400027747 Solanum tuberosum HOM05D007860 ORTHO05D009950 8.7e-17 89.7 61 67.2
Phvul.008G011200 Phaseolus vulgaris HOM05D007860 ORTHO05D009950 1.1e-16 89.4 65 67.7
Medtr7g026210 Medicago truncatula HOM05D007860 ORTHO05D009950 1.5e-16 89.0 57 75.4
unitig_747.g21379 Utricularia gibba HOM05D007860 ORTHO05D009950 1.9e-16 88.6 61 65.6
Migut.E01407 Erythranthe guttata HOM05D007860 ORTHO05D009950 3.3e-16 87.8 53 77.4
Migut.E01421 Erythranthe guttata HOM05D007860 ORTHO05D009950 3.3e-16 87.8 53 77.4
AT4G26055 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 4.3e-16 87.4 61 70.5
Prupe.1G341800 Prunus persica HOM05D007860 ORTHO05D009950 4.3e-16 87.4 49 79.6
AL7G26930 Arabidopsis lyrata HOM05D007860 ORTHO05D009950 1.3e-15 85.9 61 72.1
CDE08G0617 Ceratophyllum demersum HOM05D007860 ORTHO05D009950 1.3e-15 85.9 56 71.4
Aqoxy4G02946 Aquilegia oxysepala HOM05D007860 ORTHO05D009950 2.1e-15 85.1 58 70.7
HanXRQChr08g0220681 Helianthus annuus HOM05D007860 ORTHO05D009950 2.1e-15 85.1 60 70.0
Aa31LG3G410 Aethionema arabicum HOM05D007860 ORTHO05D009950 3.7e-15 84.3 61 68.9
CAN.G786.12 Capsicum annuum HOM05D007860 ORTHO05D009950 3.7e-15 84.3 59 62.7
Hund16092 Selenicereus undatus HOM05D007860 ORTHO05D009950 3.7e-15 84.3 58 65.5
Lalb_Chr11g0073451 Lupinus albus HOM05D007860 ORTHO05D009950 8.2e-15 83.2 65 64.6
CsaV3_5G026630 Cucumis sativus L. HOM05D007860 ORTHO05D009950 1.4e-14 82.4 58 65.5
HPP92_012590 Vanilla planifolia HOM05D007860 ORTHO05D009950 1.4e-14 82.4 56 67.9
SpUn0576_0010 Schrenkiella parvula HOM05D007860 ORTHO05D009950 1.8e-14 82.0 65 67.7
Lalb_Chr10g0091671 Lupinus albus HOM05D007860 ORTHO05D009950 2.4e-14 81.6 65 64.6
Oeu017367.1 Olea europaea HOM05D007860 ORTHO05D009950 3.1e-14 81.3 47 83.0
Ciclev10033443m.g Citrus clementina HOM05D007860 ORTHO05D009950 4.1e-14 80.9 85 57.6
MELO3C033702.2 Cucumis melo HOM05D007860 ORTHO05D009950 4.1e-14 80.9 57 64.9
Sed0021911 Sechium edule HOM05D007860 ORTHO05D009950 4.1e-14 80.9 56 66.1
MBI05_g22876_MAGBIO Magnolia biondii HOM05D007860 ORTHO05D009950 6.9e-14 80.1 53 75.5
Nn3g16785 Nelumbo nucifera HOM05D007860 ORTHO05D009950 6.9e-14 80.1 47 70.2
Lsat_1_v5_gn_8_15760 Lactuca sativa HOM05D007860 ORTHO05D009950 9.0e-14 79.7 60 66.7
Zm00001eb205410 Zea mays HOM05D007860 ORTHO05D009950 9.0e-14 79.7 49 69.4
Thhalv10026736m.g Eutrema salsugineum HOM05D007860 ORTHO05D009950 1.2e-13 79.3 57 73.7
VMungo1383G1282 Vigna mungo HOM05D007860 ORTHO05D009950 1.2e-13 79.3 45 80.0
CARHR233560 Cardamine hirsuta HOM05D007860 ORTHO05D009950 1.5e-13 79.0 63 68.3
BcaC07g38219 Brassica carinata HOM05D007860 ORTHO05D009950 2.6e-13 78.2 65 64.6
A08p20930 Brassica napus HOM05D007860 ORTHO05D009950 2.6e-13 78.2 65 64.6
C08p09770 Brassica napus HOM05D002589 ORTHO05D002742 2.6e-13 78.2 65 64.6
BolC8t48648H Brassica oleracea HOM05D002589 ORTHO05D002742 2.6e-13 78.2 65 64.6
BraA08t34046Z Brassica rapa HOM05D007860 ORTHO05D009950 2.6e-13 78.2 65 64.6
Psat3g182840 Pisum sativum HOM05D007860 ORTHO05D009950 2.6e-13 78.2 43 83.7
Sc10g0001510 Simmondsia chinensis HOM05D007860 ORTHO05D009950 2.6e-13 78.2 43 81.4
DCAR_011692 Daucus carota HOM05D007860 ORTHO05D009950 3.4e-13 77.8 58 69.0
vmacro04194 Vaccinium macrocarpon HOM05D007860 ORTHO05D009950 3.4e-13 77.8 64 60.9
Carub.0007s1490 Capsella rubella HOM05D007860 ORTHO05D009950 5.9e-13 77.0 58 67.2
PSO170G0009 Papaver somniferum HOM05D007860 ORTHO05D009950 7.6e-13 76.6 59 69.5
BcaB01g04442 Brassica carinata HOM05D007860 ORTHO05D009950 1.3e-12 75.9 53 71.7
BraA03t10609Z Brassica rapa HOM05D007860 ORTHO05D009950 1.3e-12 75.9 58 65.5
CSS0034636 Camellia sinensis var. sinensis HOM05D007860 ORTHO05D009950 1.7e-12 75.5 43 74.4
AT5G57080 Arabidopsis thaliana HOM05D007860 ORTHO05D009950 3.8e-12 74.3 53 67.9
A03p56460 Brassica napus HOM05D002589 ORTHO05D002742 3.8e-12 74.3 61 59.0
C07p54670 Brassica napus HOM05D007860 ORTHO05D009950 3.8e-12 74.3 65 61.5
BolC7t45956H Brassica oleracea HOM05D007860 ORTHO05D009950 3.8e-12 74.3 65 61.5
BraA03t14716Z Brassica rapa HOM05D007860 ORTHO05D009950 3.8e-12 74.3 61 59.0
FAN22G0325 Fragaria x ananassa HOM05D007860 ORTHO05D009950 5.0e-12 73.9 62 59.7
Sp6g18800 Schrenkiella parvula HOM05D007860 ORTHO05D009950 5.0e-12 73.9 50 72.0
Actinidia13876 Actinidia chinensis HOM05D007860 ORTHO05D009950 1.9e-11 72.0 45 64.4
arahy.Tifrunner.gnm1.ann1.WKZY2Y Arachis hypogaea HOM05D007860 ORTHO05D009950 1.9e-11 72.0 42 71.4
MD16G1008700 Malus domestica HOM05D007860 ORTHO05D009950 1.9e-11 72.0 43 74.4
BcaNung07291 Brassica carinata HOM05D007860 ORTHO05D009950 9.3e-11 69.7 53 69.8
ClCG09G019790 Citrullus lanatus HOM05D007860 ORTHO05D009950 1.2e-10 69.3 44 72.7
EL10Ac2g04657 Beta vulgaris HOM05D007860 ORTHO05D009950 1.8e-09 65.5 48 60.4
SEGI_33557 Sequoiadendron giganteum HOM05D007860 ORTHO05D009950 1.9e-08 62.0 62 53.2
RcHm_v2.0_Chr4g0445941 Rosa chinensis HOM05D007860 ORTHO05D009950 2.4e-06 55.1 45 66.7
Pp3c3_14890 Physcomitrium patens HOM05D007860 ORTHO05D009950 6.9e-06 53.5 40 62.5


User provided reference genes

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