Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A05G044300 Gossypium hirsutum HOM05D004267 ORTHO05D005267 1.9e-95 352.4 167 100.0
Gorai.009G047300 Gossypium raimondii HOM05D004267 ORTHO05D005267 8.6e-93 343.6 167 97.0
Duzib168G1102 Durio zibethinus HOM05D004267 ORTHO05D005267 7.6e-81 303.9 167 85.0
Thecc.09G050400 Theobroma cacao HOM05D004267 ORTHO05D005267 3.6e-75 285.0 167 76.6
Duzib187G0506 Durio zibethinus HOM05D004267 ORTHO05D005267 6.2e-75 284.3 167 77.2
Gohir.A06G090500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 5.2e-74 281.2 167 76.6
Gohir.D06G089500 Gossypium hirsutum HOM05D004267 ORTHO05D005267 5.2e-74 281.2 167 76.6
Gorai.010G103400 Gossypium raimondii HOM05D004267 ORTHO05D005267 5.2e-74 281.2 167 76.6
Glyma.14G092300 Glycine max HOM05D004267 ORTHO05D005267 1.7e-72 276.2 167 75.4
Psat6g019000 Pisum sativum HOM05D004267 ORTHO05D005267 3.8e-72 275.0 167 74.3
VMungo0647G2384 Vigna mungo HOM05D004267 ORTHO05D005267 1.9e-71 272.7 167 74.3
ClCG08G016900 Citrullus lanatus HOM05D004267 ORTHO05D005267 3.2e-71 271.9 167 73.7
Lj5g0002830 Lotus japonicus HOM05D004267 ORTHO05D005267 4.2e-71 271.6 167 73.1
TPR.G12986 Trifolium pratense HOM05D004267 ORTHO05D005267 5.4e-71 271.2 167 74.3
Cfa017926 Carpinus fangiana HOM05D004267 ORTHO05D005267 9.3e-71 270.4 167 72.5
Glyma.17G231200 Glycine max HOM05D004267 ORTHO05D005267 1.2e-70 270.0 167 73.7
Haze_18224 Corylus avellana HOM05D004267 ORTHO05D005267 1.6e-70 269.6 167 71.9
Phvul.001G033101 Phaseolus vulgaris HOM05D004267 ORTHO05D005267 1.6e-70 269.6 167 73.7
Prupe.1G415500 Prunus persica HOM05D004267 ORTHO05D005267 1.6e-70 269.6 167 73.7
QL02p001694 Quercus lobata HOM05D004267 ORTHO05D005267 2.1e-70 269.2 166 71.7
Medtr1g016900 Medicago truncatula HOM05D004267 ORTHO05D005267 3.5e-70 268.5 167 73.7
TAR636G0904 Trochodendron aralioides HOM05D004267 ORTHO05D005267 3.5e-70 268.5 167 70.7
CiPaw.15G042300 Carya illinoinensis HOM05D004267 ORTHO05D005267 7.8e-70 267.3 167 72.5
Ca_13187_v3 Cicer arietinum L. HOM05D004267 ORTHO05D005267 7.8e-70 267.3 167 71.9
Lalb_Chr14g0367901 Lupinus albus HOM05D004267 ORTHO05D005267 5.1e-69 264.6 167 72.5
Atru.chr7.2026 Acer truncatum HOM05D004267 ORTHO05D005267 8.7e-69 263.8 167 71.3
Sed0007787 Sechium edule HOM05D004267 ORTHO05D005267 1.1e-68 263.5 167 70.1
Eucgr.C00632 Eucalyptus grandis HOM05D004267 ORTHO05D005267 1.5e-68 263.1 167 69.5
Peaxi162Scf00247g00612 Petunia axillaris HOM05D004267 ORTHO05D005267 2.5e-68 262.3 167 73.1
TWI34G0953 Tripterygium wilfordii HOM05D004267 ORTHO05D005267 3.3e-68 261.9 167 70.1
CsaV3_2G025720 Cucumis sativus L. HOM05D004267 ORTHO05D005267 4.3e-68 261.5 167 68.3
COL.COLO4_21022 Corchorus olitorius HOM05D004267 ORTHO05D005267 2.1e-67 259.2 189 66.1
Ciclev10009729m.g Citrus clementina HOM05D004267 ORTHO05D005267 2.8e-67 258.8 166 69.9
SGA_v2.0_scaffold88G27217 Striga asiatica HOM05D004267 ORTHO05D005267 4.8e-67 258.1 167 70.1
CSS0026627 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D005267 1.8e-66 256.1 167 68.3
CSS0030161 Camellia sinensis var. sinensis HOM05D004267 ORTHO05D000002 1.8e-66 256.1 167 68.3
GSVIVG01035339001 Vitis vinifera HOM05D004267 ORTHO05D005267 2.4e-66 255.8 167 66.5
Hma1.2p1_1213F.1_g267510 Hydrangea macrophylla HOM05D004267 ORTHO05D005267 6.9e-66 254.2 167 68.9
Gohir.D05G045900 Gossypium hirsutum HOM05D004267 ORTHO05D005267 9.0e-66 253.8 167 77.2
THA.LOC104803799 Tarenaya hassleriana HOM05D004267 ORTHO05D005267 9.0e-66 253.8 167 66.5
Nitab4.5_0021628g0010 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.0e-65 252.7 167 70.1
PGR031G1882 Punica granatum HOM05D004267 ORTHO05D005267 2.0e-65 252.7 167 67.1
Nn8g38967 Nelumbo nucifera HOM05D004267 ORTHO05D005267 2.6e-65 252.3 167 68.3
arahy.Tifrunner.gnm1.ann1.35PLQF Arachis hypogaea HOM05D004267 ORTHO05D005267 3.4e-65 251.9 166 66.9
Manes.03G046100 Manihot esculenta HOM05D004267 ORTHO05D005267 3.4e-65 251.9 167 67.7
SalBow4G2144 Salvia bowleyana HOM05D004267 ORTHO05D005267 4.5e-65 251.5 167 65.9
Rhsim07G0144100 Rhododendron simsii HOM05D004267 ORTHO05D005267 7.6e-65 250.8 167 68.3
Oeu036354.1 Olea europaea HOM05D004267 ORTHO05D005267 9.9e-65 250.4 167 66.5
MSTRG.1674 Avicennia marina HOM05D004267 ORTHO05D005267 1.3e-64 250.0 167 65.3
RcHm_v2.0_Chr6g0310421 Rosa chinensis HOM05D004267 ORTHO05D005267 1.3e-64 250.0 166 68.1
Actinidia14699 Actinidia chinensis HOM05D004267 ORTHO05D005267 2.2e-64 249.2 164 66.5
TAR624G0139 Trochodendron aralioides HOM05D004267 ORTHO05D005267 6.4e-64 247.7 168 66.1
HanXRQChr17g0539351 Helianthus annuus HOM05D004267 ORTHO05D005267 8.4e-64 247.3 165 66.7
Lsat_1_v5_gn_3_28241 Lactuca sativa HOM05D004267 ORTHO05D005267 8.4e-64 247.3 165 66.7
Actinidia18200 Actinidia chinensis HOM05D004267 ORTHO05D005267 1.4e-63 246.5 164 65.2
Cc08_g10140 Coffea canephora HOM05D004267 ORTHO05D005267 1.4e-63 246.5 167 65.9
CANSAT01G0851 Cannabis sativa HOM05D004267 ORTHO05D005267 1.9e-63 246.1 167 66.5
CANSAT01G1320 Cannabis sativa HOM05D004267 ORTHO05D005267 1.9e-63 246.1 167 66.5
unitig_578.g16576 Utricularia gibba HOM05D004267 ORTHO05D005267 2.4e-63 245.7 164 65.2
vmacro05276 Vaccinium macrocarpon HOM05D004267 ORTHO05D005267 2.4e-63 245.7 174 64.9
Potri.006G233500 Populus trichocarpa HOM05D004267 ORTHO05D005267 3.2e-63 245.4 167 67.7
BolC1t00557H Brassica oleracea HOM05D004267 ORTHO05D005267 3.5e-62 241.9 168 64.9
BraA01t00509Z Brassica rapa HOM05D004267 ORTHO05D005267 3.5e-62 241.9 168 64.9
CAN.G309.57 Capsicum annuum HOM05D004267 ORTHO05D005267 6.0e-62 241.1 168 67.3
Aa31sc248G70 Aethionema arabicum HOM05D004267 ORTHO05D005267 7.9e-62 240.7 168 63.7
A01p05350 Brassica napus HOM05D004267 ORTHO05D005267 1.0e-61 240.4 168 64.3
Solyc11g070050.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 1.0e-61 240.4 167 65.9
Sopen11g028730 Solanum pennellii HOM05D004267 ORTHO05D005267 1.0e-61 240.4 167 65.9
PGSC0003DMG400025516 Solanum tuberosum HOM05D004267 ORTHO05D005267 1.0e-61 240.4 167 65.3
AL7G18760 Arabidopsis lyrata HOM05D004267 ORTHO05D005267 1.8e-61 239.6 168 64.3
BcaC09g52093 Brassica carinata HOM05D004267 ORTHO05D005267 1.8e-61 239.6 168 64.3
C01p05770 Brassica napus HOM05D004267 ORTHO05D005267 2.3e-61 239.2 168 64.3
PSO210G6502 Papaver somniferum HOM05D004267 ORTHO05D005267 2.3e-61 239.2 167 60.5
FAN20G1958 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.0e-61 238.8 166 63.3
AT4G32930 Arabidopsis thaliana HOM05D004267 ORTHO05D005267 3.9e-61 238.4 168 63.7
Carub.0007s0755 Capsella rubella HOM05D004267 ORTHO05D005267 5.1e-61 238.0 168 63.1
PSO210G4696 Papaver somniferum HOM05D004267 ORTHO05D005267 5.1e-61 238.0 167 59.9
A03p61690 Brassica napus HOM05D004267 ORTHO05D005267 6.7e-61 237.7 168 63.7
C07p59420 Brassica napus HOM05D004267 ORTHO05D005267 6.7e-61 237.7 168 63.7
FAN24G1314 Fragaria x ananassa HOM05D004267 ORTHO05D005267 6.7e-61 237.7 166 62.7
ATR0789G016 Amborella trichopoda HOM05D004267 ORTHO05D005267 8.7e-61 237.3 167 61.7
FvH4_2g32280 Fragaria vesca HOM05D004267 ORTHO05D005267 1.1e-60 236.9 166 62.7
Thhalv10025837m.g Eutrema salsugineum HOM05D004267 ORTHO05D005267 1.9e-60 236.1 168 63.7
Migut.A00159 Erythranthe guttata HOM05D004267 ORTHO05D005267 2.5e-60 235.7 167 62.3
Sp7g30710 Schrenkiella parvula HOM05D004267 ORTHO05D005267 2.5e-60 235.7 168 63.1
Aa31LG2G6480 Aethionema arabicum HOM05D004267 ORTHO05D005267 6.2e-59 231.1 168 63.1
BraA03t15208Z Brassica rapa HOM05D004267 ORTHO05D005267 1.8e-58 229.6 178 60.1
arahy.Tifrunner.gnm1.ann1.97AHJW Arachis hypogaea HOM05D004267 ORTHO05D005267 4.0e-58 228.4 203 54.2
FAN15G3631 Fragaria x ananassa HOM05D004267 ORTHO05D005267 4.0e-58 228.4 179 58.7
Sc06g0000890 Simmondsia chinensis HOM05D004267 ORTHO05D005267 6.9e-58 227.6 167 61.1
Aqoxy7G03943 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 9.0e-58 227.3 159 62.3
Dinv27959 Davidia involucrata HOM05D004267 ORTHO05D005267 9.0e-58 227.3 167 62.3
Lj8A557T6 Lonicera japonica HOM05D004267 ORTHO05D005267 2.6e-57 225.7 167 61.7
ECA246G5265 Erigeron canadensis HOM05D004267 ORTHO05D005267 5.8e-57 224.6 165 61.2
Solyc11g070060.2 Solanum lycopersicum HOM05D004267 ORTHO05D005267 7.6e-57 224.2 167 62.3
EL10Ac2g03945 Beta vulgaris HOM05D004267 ORTHO05D005267 9.9e-57 223.8 167 59.3
Sc09g0009630 Simmondsia chinensis HOM05D004267 ORTHO05D005267 9.9e-57 223.8 167 57.5
Os01g0565600 Oryza sativa ssp. japonica HOM05D004267 ORTHO05D005267 3.8e-56 221.9 166 61.4
DCAR_000778 Daucus carota HOM05D004267 ORTHO05D005267 6.4e-56 221.1 167 61.1
Sabra06G0181900 Salix brachista HOM05D004267 ORTHO05D005267 8.4e-56 220.7 219 50.7
SEGI_14756 Sequoiadendron giganteum HOM05D004267 ORTHO05D005267 1.9e-55 219.5 167 58.1
MBI04_g12184_MAGBIO Magnolia biondii HOM05D004267 ORTHO05D005267 5.5e-55 218.0 189 55.0
HPP92_004580 Vanilla planifolia HOM05D004267 ORTHO05D005267 3.0e-53 212.2 166 56.6
Zm00001eb356880 Zea mays HOM05D004267 ORTHO05D005267 6.7e-53 211.1 165 57.0
MELO3C010766.2 Cucumis melo HOM05D004267 ORTHO05D005267 1.9e-52 209.5 137 67.2
RcHm_v2.0_Chr6g0310431 Rosa chinensis HOM05D004267 ORTHO05D005267 3.7e-51 205.3 166 58.4
Hund03363 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.1e-50 203.8 189 48.7
Nitab4.5_0000664g0030 Nicotiana tabacum HOM05D006502 ORTHO05D005267 1.4e-50 203.4 131 68.7
BcaNung02146 Brassica carinata HOM05D004267 ORTHO05D005267 2.0e-49 199.5 127 66.9
Aqoxy408s001 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 7.6e-49 197.6 126 66.7
FAN27G1738 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.8e-48 195.3 176 51.1
MD08G1073900 Malus domestica HOM05D004267 ORTHO05D005267 1.1e-47 193.7 177 54.2
FvH4_2g32260 Fragaria vesca HOM05D004267 ORTHO05D005267 2.7e-46 189.1 164 54.3
Hund19479 Selenicereus undatus HOM05D004267 ORTHO05D005267 1.3e-45 186.8 176 47.2
Mapoly0044s0101 Marchantia polymorpha HOM05D004267 ORTHO05D005267 2.3e-45 186.0 167 48.5
CARHR240940 Cardamine hirsuta HOM05D004267 ORTHO05D005267 1.5e-44 183.3 136 60.3
CDE07G0102 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 3.1e-42 175.6 116 65.5
Nn6g35383 Nelumbo nucifera HOM05D004267 ORTHO05D005267 6.9e-42 174.5 122 61.5
Pp3c5_10040 Physcomitrium patens HOM05D004267 ORTHO05D005267 9.0e-42 174.1 167 47.3
DCAR_004448 Daucus carota HOM05D004267 ORTHO05D005267 2.6e-41 172.6 166 48.8
DCAR_004449 Daucus carota HOM05D004267 ORTHO05D005267 2.5e-39 166.0 165 47.3
AUR62040201 Chenopodium quinoa HOM05D004267 ORTHO05D005267 4.2e-39 165.2 134 54.5
AUR62043052 Chenopodium quinoa HOM05D004267 ORTHO05D005267 5.5e-39 164.9 133 54.9
FAN15G2319 Fragaria x ananassa HOM05D004267 ORTHO05D005267 9.3e-39 164.1 150 53.3
Sopen11g028740 Solanum pennellii HOM05D004267 ORTHO05D005267 2.7e-38 162.5 167 49.1
SMO117G0066 Selaginella moellendorffii HOM05D004267 ORTHO05D005267 3.6e-38 162.2 166 45.2
FAN24G0417 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.0e-37 159.1 146 50.7
Lsat_1_v5_gn_5_67680 Lactuca sativa HOM05D004267 ORTHO05D005267 3.9e-37 158.7 131 58.8
arahy.Tifrunner.gnm1.ann1.BB3MLG Arachis hypogaea HOM05D004267 ORTHO05D005267 4.3e-36 155.2 97 71.1
arahy.Tifrunner.gnm1.ann1.JED36R Arachis hypogaea HOM05D004267 ORTHO05D005267 4.3e-36 155.2 97 71.1
AUR62009204 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.8e-35 152.5 131 51.1
CDE07G1388 Ceratophyllum demersum HOM05D004267 ORTHO05D005267 1.1e-34 150.6 100 66.0
CBR_g18691 Chara braunii HOM05D004267 ORTHO05D005267 3.1e-34 149.1 164 44.5
Cpa.g.sc78.12 Carica papaya HOM05D004267 ORTHO05D005267 2.6e-33 146.0 98 66.3
AagrBONN_evm.TU.Sc2ySwM_344.4469 Anthoceros agrestis HOM05D004267 ORTHO05D005267 3.6e-30 135.6 127 45.7
Zm00001eb159830 Zea mays HOM05D004267 ORTHO05D005267 1.3e-27 127.1 97 57.7
GSVIVG01016838001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.4e-26 123.6 164 39.6
Peaxi162Scf00545g00002 Petunia axillaris HOM05D004267 ORTHO05D005267 1.2e-25 120.6 116 54.3
GSVIVG01016840001 Vitis vinifera HOM05D004267 ORTHO05D005267 1.2e-25 120.6 164 39.6
Oeu057699.1 Olea europaea HOM05D004267 ORTHO05D005267 8.5e-24 114.4 112 50.0
Aqoxy7G03867 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 3.2e-23 112.5 126 40.5
Rhsim01G0086000 Rhododendron simsii HOM05D004267 ORTHO05D005267 3.2e-23 112.5 80 61.2
BcaC07g42315 Brassica carinata HOM05D004267 ORTHO05D005267 1.2e-22 110.5 183 38.3
Peaxi162Scf00545g00001 Petunia axillaris HOM05D004267 ORTHO05D005267 1.0e-21 107.5 112 51.8
Aqoxy7G03891 Aquilegia oxysepala HOM05D004267 ORTHO05D005267 2.4e-18 96.3 89 50.6
Cre09.g395800 Chlamydomonas reinhardtii HOM05D004267 ORTHO05D005267 3.0e-13 79.3 167 31.1
AUR62002213 Chenopodium quinoa HOM05D004267 ORTHO05D005267 8.8e-13 77.8 61 52.5
AUR62018016 Chenopodium quinoa HOM05D004267 ORTHO05D005267 8.8e-13 77.8 61 52.5
AUR62010512 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.2e-12 77.4 60 51.7
AUR62022800 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.0e-12 76.6 64 50.0
Nitab4.5_0001927g0070 Nicotiana tabacum HOM05D004267 ORTHO05D005267 9.7e-12 74.3 61 52.5
AUR62007889 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.2e-11 73.2 60 50.0
Nitab4.5_0001927g0060 Nicotiana tabacum HOM05D004267 ORTHO05D005267 2.2e-11 73.2 115 33.9
AUR62034857 Chenopodium quinoa HOM05D004267 ORTHO05D005267 1.1e-10 70.9 61 49.2
AUR62044607 Chenopodium quinoa HOM05D004267 ORTHO05D005267 2.4e-10 69.7 61 47.5
Thecc.06G107200 Theobroma cacao HOM05D004267 ORTHO05D044750 1.0e-08 64.3 129 32.6
CAN.G1143.36 Capsicum annuum HOM05D001836 ORTHO05D001519 1.7e-08 63.5 87 39.1
VMungo1196G0001 Vigna mungo HOM05D005620 ORTHO05D005267 4.2e-07 58.9 41 65.9
AUR62036408 Chenopodium quinoa HOM05D001707 ORTHO05D001694 5.5e-07 58.5 45 53.3
FAN15G3082 Fragaria x ananassa HOM05D004267 ORTHO05D005267 3.6e-06 55.8 59 39.0
Hma1.2p1_2790F.1_g328600 Hydrangea macrophylla HOM05D005814 ORTHO05D006821 6.1e-06 55.1 36 63.9


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