Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A04G143800 Gossypium hirsutum HOM05D008187 ORTHO05D009830 9.4e-95 350.1 171 100.0
Gohir.D04G188100 Gossypium hirsutum HOM05D008187 ORTHO05D009830 2.6e-92 342.0 171 97.7
Gorai.012G183500 Gossypium raimondii HOM05D008187 ORTHO05D009830 8.3e-91 337.0 173 96.5
Thecc.02G303500 Theobroma cacao HOM05D008187 ORTHO05D009830 6.4e-43 177.9 169 57.4
COL.COLO4_27577 Corchorus olitorius HOM05D008187 ORTHO05D009830 3.0e-32 142.5 170 52.4
Sabra08G0106100 Salix brachista HOM05D008187 ORTHO05D009830 5.6e-31 138.3 156 50.0
Potri.008G140000 Populus trichocarpa HOM05D008187 ORTHO05D009830 7.3e-31 137.9 160 48.1
Potri.010G101500 Populus trichocarpa HOM05D008187 ORTHO05D009830 7.3e-31 137.9 160 50.6
Manes.17G089700 Manihot esculenta HOM05D008187 ORTHO05D009830 2.0e-28 129.8 155 51.0
Manes.15G138900 Manihot esculenta HOM05D008187 ORTHO05D009830 7.1e-26 121.3 119 56.3
QL03p039185 Quercus lobata HOM05D008187 ORTHO05D009830 3.5e-25 119.0 164 48.2
Dinv08898 Davidia involucrata HOM05D008187 ORTHO05D009830 1.0e-24 117.5 153 47.1
GSVIVG01011592001 Vitis vinifera HOM05D008187 ORTHO05D009830 2.3e-24 116.3 157 46.5
Sabra10G0074300 Salix brachista HOM05D008187 ORTHO05D009830 5.1e-24 115.2 162 48.8
Lalb_Chr07g0187941 Lupinus albus HOM05D008187 ORTHO05D009830 2.8e-22 109.4 163 41.1
Dinv20504 Davidia involucrata HOM05D008187 ORTHO05D009830 6.2e-22 108.2 120 50.0
Dinv20537 Davidia involucrata HOM05D008187 ORTHO05D009830 6.2e-22 108.2 120 50.0
CiPaw.06G058400 Carya illinoinensis HOM05D008187 ORTHO05D009830 3.1e-21 105.9 111 50.5
MD13G1015500 Malus domestica HOM05D008187 ORTHO05D009830 3.1e-21 105.9 172 43.0
CSS0005647 Camellia sinensis var. sinensis HOM05D008187 ORTHO05D009830 5.3e-21 105.1 156 43.6
Ciclev10016789m.g Citrus clementina HOM05D008187 ORTHO05D009830 5.3e-21 105.1 167 39.5
TAR622G0296 Trochodendron aralioides HOM05D008187 ORTHO05D009830 6.9e-21 104.8 165 44.2
Glyma.08G092600 Glycine max HOM05D008187 ORTHO05D009830 1.2e-20 104.0 158 44.3
Atru.chr11.1001 Acer truncatum HOM05D008187 ORTHO05D009830 1.5e-20 103.6 166 42.8
Ca_18193_v3 Cicer arietinum L. HOM05D008187 ORTHO05D009830 3.4e-20 102.4 156 42.9
Phvul.002G184100 Phaseolus vulgaris HOM05D008187 ORTHO05D009830 4.5e-20 102.1 159 42.1
CiPaw.05G158900 Carya illinoinensis HOM05D008187 ORTHO05D009830 5.8e-20 101.7 156 46.2
arahy.Tifrunner.gnm1.ann1.61TZTK Arachis hypogaea HOM05D008187 ORTHO05D009830 1.0e-19 100.9 119 52.9
arahy.Tifrunner.gnm1.ann1.FUMC5T Arachis hypogaea HOM05D008187 ORTHO05D009830 1.3e-19 100.5 121 52.1
Psat7g085360 Pisum sativum HOM05D008187 ORTHO05D009830 1.3e-19 100.5 158 41.8
Glyma.05G137300 Glycine max HOM05D008187 ORTHO05D009830 2.9e-19 99.4 159 42.1
Hma1.2p1_0441F.1_g153840 Hydrangea macrophylla HOM05D008187 ORTHO05D009830 8.4e-19 97.8 135 43.7
VMungo0251G0444 Vigna mungo HOM05D008187 ORTHO05D009830 1.1e-18 97.4 120 47.5
Lj4g0022895 Lotus japonicus HOM05D008187 ORTHO05D009830 2.5e-18 96.3 123 44.7
Eucgr.B02651 Eucalyptus grandis HOM05D008187 ORTHO05D009830 7.9e-17 91.3 147 38.1
Rhsim09G0085300 Rhododendron simsii HOM05D008187 ORTHO05D009830 3.0e-16 89.4 160 39.4
TWI74G1547 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 3.9e-16 89.0 121 47.1
FAN07G0781 Fragaria x ananassa HOM05D008187 ORTHO05D009830 3.3e-15 85.9 149 40.9
FAN17G0865 Fragaria x ananassa HOM05D008187 ORTHO05D009830 4.3e-15 85.5 149 40.9
FAN12G2367 Fragaria x ananassa HOM05D008187 ORTHO05D009830 5.7e-15 85.1 149 40.9
Prupe.1G338300 Prunus persica HOM05D008187 ORTHO05D009830 5.7e-15 85.1 172 36.0
CANSAT78G2356 Cannabis sativa HOM05D008187 ORTHO05D009830 7.4e-15 84.7 144 39.6
FvH4_4g26140 Fragaria vesca HOM05D008187 ORTHO05D009830 1.3e-14 84.0 149 40.3
FAN22G0157 Fragaria x ananassa HOM05D008187 ORTHO05D009830 1.3e-14 84.0 149 40.3
THA.LOC104805100 Tarenaya hassleriana HOM05D010619 ORTHO05D009830 1.3e-14 84.0 154 37.7
TWI77G0539 Tripterygium wilfordii HOM05D008187 ORTHO05D009830 1.6e-14 83.6 106 50.0
FAN12G2898 Fragaria x ananassa HOM05D008187 ORTHO05D009830 2.1e-14 83.2 149 40.3
MD16G1013000 Malus domestica HOM05D008187 ORTHO05D009830 9.0e-13 77.8 144 38.9
DCAR_023540 Daucus carota HOM05D008187 ORTHO05D009830 1.5e-12 77.0 116 37.1
Sed0002824 Sechium edule HOM05D008187 ORTHO05D009830 5.8e-12 75.1 120 41.7
Actinidia38421 Actinidia chinensis HOM05D008187 ORTHO05D009830 3.8e-11 72.4 126 38.9
MBI19_g01917_MAGBIO Magnolia biondii HOM05D003603 ORTHO05D009830 6.5e-11 71.6 120 42.5
Lj6A731T87 Lonicera japonica HOM05D008187 ORTHO05D009830 1.4e-10 70.5 123 35.8
ClCG11G000980 Citrullus lanatus HOM05D008187 ORTHO05D009830 4.2e-10 68.9 122 41.8
CsaV3_5G012950 Cucumis sativus L. HOM05D008187 ORTHO05D009830 4.2e-10 68.9 116 40.5
Thecc.03G009300 Theobroma cacao HOM05D000009 ORTHO05D009830 4.2e-10 68.9 79 48.1
FAN17G0113 Fragaria x ananassa HOM05D008187 ORTHO05D009830 5.5e-10 68.6 109 41.3
MELO3C020063.2 Cucumis melo HOM05D008187 ORTHO05D009830 7.1e-10 68.2 122 40.2
Actinidia34059 Actinidia chinensis HOM05D008187 ORTHO05D009830 1.6e-09 67.0 120 35.0
CDE03G0025 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 1.8e-08 63.5 93 36.6
Carub.0004s1726 Capsella rubella HOM05D003603 ORTHO05D004186 2.3e-08 63.2 90 35.6
Haze_10807 Corylus avellana HOM05D008187 ORTHO05D009830 3.9e-08 62.4 69 53.6
CDE06G0200 Ceratophyllum demersum HOM05D003603 ORTHO05D004186 6.7e-08 61.6 58 48.3
TPR.G11831 Trifolium pratense HOM05D008187 ORTHO05D009830 6.7e-08 61.6 95 40.0
ATR0598G345 Amborella trichopoda HOM05D003603 ORTHO05D004186 1.5e-07 60.5 119 35.3
ECA234G1527 Erigeron canadensis HOM05D005481 ORTHO05D006779 2.5e-07 59.7 117 35.0
AL4G31620 Arabidopsis lyrata HOM05D003603 ORTHO05D004186 4.3e-07 58.9 90 34.4
arahy.Tifrunner.gnm1.ann1.JMHQ16 Arachis hypogaea HOM05D003603 ORTHO05D004186 4.3e-07 58.9 99 35.4
arahy.Tifrunner.gnm1.ann1.Z69TJ6 Arachis hypogaea HOM05D003603 ORTHO05D004186 4.3e-07 58.9 99 35.4
TAR374G1419 Trochodendron aralioides HOM05D003603 ORTHO05D009830 4.3e-07 58.9 73 47.9
Thhalv10017363m.g Eutrema salsugineum HOM05D003603 ORTHO05D004186 5.7e-07 58.5 75 37.3
ECA233G2030 Erigeron canadensis HOM05D003603 ORTHO05D004186 7.4e-07 58.2 98 33.7
HanXRQChr16g0527611 Helianthus annuus HOM05D008187 ORTHO05D009830 7.4e-07 58.2 100 36.0
AUR62007409 Chenopodium quinoa HOM05D003603 ORTHO05D004186 9.7e-07 57.8 62 41.9
AUR62027323 Chenopodium quinoa HOM05D003603 ORTHO05D004186 9.7e-07 57.8 62 41.9
Lalb_Chr16g0380941 Lupinus albus HOM05D003603 ORTHO05D004186 9.7e-07 57.8 74 43.2
Hund11105 Selenicereus undatus HOM05D003603 ORTHO05D004186 9.7e-07 57.8 92 33.7
DCAR_026822 Daucus carota HOM05D008187 ORTHO05D009830 1.3e-06 57.4 132 35.6
Sed0026512 Sechium edule HOM05D003603 ORTHO05D004186 1.3e-06 57.4 119 31.9
Lalb_Chr05g0215661 Lupinus albus HOM05D003603 ORTHO05D004186 1.6e-06 57.0 123 30.9
Peaxi162Scf00052g00329 Petunia axillaris HOM05D003603 ORTHO05D004186 1.6e-06 57.0 92 39.1
Nn3g18471 Nelumbo nucifera HOM05D008187 ORTHO05D009830 2.2e-06 56.6 79 48.1
GSVIVG01013000001 Vitis vinifera HOM05D003603 ORTHO05D004186 2.2e-06 56.6 56 50.0
HanXRQChr17g0566281 Helianthus annuus HOM05D008187 ORTHO05D009830 2.8e-06 56.2 85 40.0
Haze_10806 Corylus avellana HOM05D008187 ORTHO05D009830 3.7e-06 55.8 72 45.8
Duzib068G0284 Durio zibethinus HOM05D003603 ORTHO05D004186 3.7e-06 55.8 62 41.9
FAN13G0864 Fragaria x ananassa HOM05D003603 ORTHO05D004186 3.7e-06 55.8 92 37.0
Lsat_1_v5_gn_4_24181 Lactuca sativa HOM05D008187 ORTHO05D009830 3.7e-06 55.8 120 35.8
Ah.12g055980 Amaranthus hybridus HOM05D003603 ORTHO05D004186 4.8e-06 55.5 62 40.3
CARHR144510 Cardamine hirsuta HOM05D010619 ORTHO05D009830 4.8e-06 55.5 85 36.5
Cc08_g03850 Coffea canephora HOM05D003603 ORTHO05D004186 4.8e-06 55.5 69 39.1
Manes.15G192766 Manihot esculenta HOM05D003603 ORTHO05D004186 4.8e-06 55.5 63 41.3
PSO782G4801 Papaver somniferum HOM05D003603 ORTHO05D004186 4.8e-06 55.5 82 35.4
Atru.chr6.1552 Acer truncatum HOM05D003603 ORTHO05D004186 6.3e-06 55.1 57 43.9
Carub.0005s0092 Capsella rubella HOM05D010619 ORTHO05D009830 6.3e-06 55.1 79 43.0
HPP92_005435 Vanilla planifolia HOM05D003603 ORTHO05D004186 6.3e-06 55.1 117 30.8
HPP92_005441 Vanilla planifolia HOM05D003603 ORTHO05D004186 6.3e-06 55.1 117 30.8
ATR0829G136 Amborella trichopoda HOM05D003603 ORTHO05D004186 8.2e-06 54.7 64 42.2
EL10Ac5g11930 Beta vulgaris HOM05D003603 ORTHO05D004186 8.2e-06 54.7 54 44.4
CSS0028298 Camellia sinensis var. sinensis HOM05D003603 ORTHO05D004186 8.2e-06 54.7 93 36.6
Gohir.A03G000024 Gossypium hirsutum HOM05D003603 ORTHO05D004186 8.2e-06 54.7 70 38.6
Gohir.D03G177000 Gossypium hirsutum HOM05D003603 ORTHO05D004186 8.2e-06 54.7 70 38.6
Gorai.003G186200 Gossypium raimondii HOM05D003080 ORTHO05D003601 8.2e-06 54.7 70 38.6
Nn3g19353 Nelumbo nucifera HOM05D003603 ORTHO05D004186 8.2e-06 54.7 51 47.1
Sp4g17800 Schrenkiella parvula HOM05D003603 ORTHO05D004186 8.2e-06 54.7 74 37.8
Hund14334 Selenicereus undatus HOM05D003603 ORTHO05D004186 8.2e-06 54.7 63 41.3


User provided reference genes

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