Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A04G133025 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.2e-98 360.5 176 100.0
Gohir.A04G133251 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.0e-75 287.0 156 89.7
Gohir.D04G176456 Gossypium hirsutum HOM05D002599 ORTHO05D036100 1.0e-75 287.0 155 89.0
Gorai.012G168500 Gossypium raimondii HOM05D002599 ORTHO05D036100 5.0e-75 284.6 155 89.0
Gohir.D04G176540 Gossypium hirsutum HOM05D002599 ORTHO05D036100 3.2e-74 282.0 155 88.4
Gohir.A04G133650 Gossypium hirsutum HOM05D002599 ORTHO05D001895 5.7e-71 271.2 150 88.0
Gohir.A04G133401 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.8e-67 258.5 150 85.3
Gorai.012G169400 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.3e-64 249.2 160 79.4
Gohir.D04G176066 Gossypium hirsutum HOM05D002599 ORTHO05D047328 2.1e-33 146.4 106 64.2
Gorai.012G167600 Gossypium raimondii HOM05D002599 ORTHO05D047328 2.8e-33 146.0 106 64.2
Gorai.012G168100 Gossypium raimondii HOM05D002599 ORTHO05D036187 6.4e-30 134.8 187 42.2
Thecc.02G022700 Theobroma cacao HOM05D002599 ORTHO05D012670 5.4e-29 131.7 102 59.8
Gohir.D04G176526 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.2e-29 131.0 192 41.7
Thecc.02G022300 Theobroma cacao HOM05D002599 ORTHO05D012670 1.3e-27 127.1 102 57.8
Gorai.012G168400 Gossypium raimondii HOM05D002599 ORTHO05D036187 3.9e-27 125.6 193 38.3
Gohir.D04G176428 Gossypium hirsutum HOM05D002599 ORTHO05D036187 6.6e-27 124.8 193 38.3
Gorai.012G167800 Gossypium raimondii HOM05D002599 ORTHO05D012670 8.7e-27 124.4 104 56.7
Gohir.A04G133075 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.1e-26 124.0 189 41.8
Gorai.012G167700 Gossypium raimondii HOM05D002599 ORTHO05D012670 7.3e-26 121.3 136 47.1
Gohir.D04G176200 Gossypium hirsutum HOM05D002599 ORTHO05D012670 9.6e-26 120.9 106 54.7
Thecc.02G023200 Theobroma cacao HOM05D002599 ORTHO05D012670 2.8e-25 119.4 101 55.4
Gohir.D04G176250 Gossypium hirsutum HOM05D002599 ORTHO05D012670 3.6e-25 119.0 102 54.9
Gohir.D01G173600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 4.7e-25 118.6 101 58.4
Gohir.D04G176470 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.7e-25 118.6 182 41.8
Gohir.D04G176554 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.7e-25 118.6 182 41.8
Gorai.002G215700 Gossypium raimondii HOM05D002599 ORTHO05D012670 6.2e-25 118.2 101 58.4
COL.COLO4_17742 Corchorus olitorius HOM05D002599 ORTHO05D012670 8.1e-25 117.9 100 59.0
Gohir.A04G132600 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.1e-24 117.5 136 46.3
Thecc.02G021800 Theobroma cacao HOM05D002599 ORTHO05D012670 3.1e-24 115.9 99 56.6
Gohir.A01G182540 Gossypium hirsutum HOM05D002599 ORTHO05D012670 5.2e-24 115.2 101 57.4
Thecc.02G024100 Theobroma cacao HOM05D002599 ORTHO05D012670 6.9e-24 114.8 99 54.5
Thecc.02G022600 Theobroma cacao HOM05D002599 ORTHO05D012670 1.5e-23 113.6 128 46.1
COL.COLO4_17749 Corchorus olitorius HOM05D002599 ORTHO05D012670 5.8e-23 111.7 103 56.3
Thecc.02G024300 Theobroma cacao HOM05D002599 ORTHO05D012670 7.6e-23 111.3 102 52.9
Gorai.012G169200 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.7e-22 110.2 73 72.6
Thecc.02G022200 Theobroma cacao HOM05D002599 ORTHO05D012670 1.1e-21 107.5 99 52.5
Gohir.D04G176484 Gossypium hirsutum HOM05D002599 ORTHO05D029872 4.2e-21 105.5 107 50.5
Gohir.A04G133150 Gossypium hirsutum HOM05D002599 ORTHO05D029872 5.4e-21 105.1 107 50.5
Gohir.D04G176568 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.2e-20 104.0 107 49.5
Gorai.012G168700 Gossypium raimondii HOM05D002599 ORTHO05D029872 2.1e-20 103.2 107 49.5
Gorai.012G168300 Gossypium raimondii HOM05D002599 ORTHO05D047846 3.5e-20 102.4 100 49.0
Gorai.012G169000 Gossypium raimondii HOM05D002599 ORTHO05D029872 5.1e-19 98.6 100 50.0
COL.COLO4_17741 Corchorus olitorius HOM05D001654 ORTHO05D002773 1.4e-16 90.5 102 48.0
Gohir.D04G176498 Gossypium hirsutum HOM05D002599 ORTHO05D047810 6.9e-16 88.2 106 45.3
Gorai.012G168900 Gossypium raimondii HOM05D002599 ORTHO05D047810 9.0e-16 87.8 106 45.3
Gohir.A04G133451 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-15 86.3 106 44.3
Gorai.012G168800 Gossypium raimondii HOM05D002599 ORTHO05D036327 3.4e-15 85.9 106 45.3
Sabra15G0012000 Salix brachista HOM05D002599 ORTHO05D001895 4.5e-15 85.5 101 45.5
Gohir.D04G176414 Gossypium hirsutum HOM05D002599 ORTHO05D047846 7.6e-15 84.7 100 44.0
Gohir.A04G130724 Gossypium hirsutum HOM05D002599 ORTHO05D012670 1.3e-14 84.0 106 44.3
Gorai.012G169100 Gossypium raimondii HOM05D002599 ORTHO05D036327 4.9e-14 82.0 106 42.5
Gohir.D04G176582 Gossypium hirsutum HOM05D002599 ORTHO05D036327 1.4e-13 80.5 106 42.5
Sabra15G0013000 Salix brachista HOM05D002599 ORTHO05D001895 1.9e-13 80.1 111 42.3
Potri.015G015650 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-13 79.0 103 45.6
Potri.015G016000 Populus trichocarpa HOM05D002599 ORTHO05D001895 4.2e-13 79.0 108 45.4
Sabra15G0012200 Salix brachista HOM05D002599 ORTHO05D001895 5.4e-13 78.6 111 41.4
Sabra15G0012300 Salix brachista HOM05D002599 ORTHO05D001895 9.3e-13 77.8 111 43.2
Sabra15G0012400 Salix brachista HOM05D002599 ORTHO05D001895 9.3e-13 77.8 111 43.2
Potri.014G068000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-12 77.4 110 36.4
Sabra15G0012600 Salix brachista HOM05D002599 ORTHO05D001895 3.5e-12 75.9 108 41.7
Potri.015G014850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-11 74.3 103 41.7
Potri.015G016100 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.0e-11 74.3 110 42.7
Potri.012G013000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-11 73.6 109 39.4
Potri.014G067900 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-11 73.6 114 38.6
Potri.015G015501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.8e-11 73.6 103 42.7
Potri.012G013700 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.3e-11 73.2 110 40.0
Potri.012G012950 Populus trichocarpa HOM05D002599 ORTHO05D001895 6.7e-11 71.6 108 38.9
Potri.012G012850 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.1e-10 70.9 108 38.9
Potri.015G015275 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.5e-10 70.5 103 41.7
Potri.012G013167 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-10 70.1 103 38.8
Potri.012G013501 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.9e-10 70.1 109 36.7
Sabra15G0012100 Salix brachista HOM05D002599 ORTHO05D001895 2.5e-10 69.7 107 41.1
Thecc.02G092200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.5e-10 69.7 109 35.8
Thecc.02G026500 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-10 69.3 115 37.4
Thecc.04G012700 Theobroma cacao HOM05D002599 ORTHO05D001895 3.3e-10 69.3 99 42.4
Thecc.02G023500 Theobroma cacao HOM05D002599 ORTHO05D001895 4.3e-10 68.9 109 37.6
Duzib147G0900 Durio zibethinus HOM05D002599 ORTHO05D001895 7.4e-10 68.2 100 43.0
Gohir.A12G043200 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.6e-10 67.8 116 36.2
Gohir.D02G236400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 9.6e-10 67.8 112 34.8
Gorai.005G264500 Gossypium raimondii HOM05D002599 ORTHO05D001895 9.6e-10 67.8 112 34.8
Potri.015G015800 Populus trichocarpa HOM05D002599 ORTHO05D001895 9.6e-10 67.8 109 38.5
Thecc.02G026200 Theobroma cacao HOM05D002599 ORTHO05D001895 9.6e-10 67.8 113 36.3
AUR62019765 Chenopodium quinoa HOM05D002599 ORTHO05D001895 1.6e-09 67.0 102 41.2
Manes.10G120000 Manihot esculenta HOM05D002599 ORTHO05D001895 2.1e-09 66.6 86 39.5
Sabra12G0018100 Salix brachista HOM05D002599 ORTHO05D001895 2.1e-09 66.6 110 36.4
COL.COLO4_11449 Corchorus olitorius HOM05D006446 ORTHO05D007832 2.8e-09 66.2 116 37.1
COL.COLO4_25716 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.8e-09 66.2 115 39.1
Gohir.A10G235900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.8e-09 66.2 111 41.4
Sabra15G0010100 Salix brachista HOM05D002599 ORTHO05D001895 2.8e-09 66.2 101 40.6
Thecc.02G026400 Theobroma cacao HOM05D002599 ORTHO05D001895 2.8e-09 66.2 113 36.3
Gohir.A04G130718 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.7e-09 65.9 106 39.6
Sabra12G0018200 Salix brachista HOM05D002599 ORTHO05D001895 4.8e-09 65.5 85 40.0
Thecc.02G026300 Theobroma cacao HOM05D002599 ORTHO05D001895 8.1e-09 64.7 113 36.3
Thecc.10G017100 Theobroma cacao HOM05D002599 ORTHO05D001895 1.1e-08 64.3 109 33.9
COL.COLO4_29044 Corchorus olitorius HOM05D002599 ORTHO05D001895 1.4e-08 63.9 95 38.9
Gorai.012G167500 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.4e-08 63.9 148 31.8
Atru.chr4.3201 Acer truncatum HOM05D002599 ORTHO05D001895 2.4e-08 63.2 116 32.8
Atru.chr4.3202 Acer truncatum HOM05D002599 ORTHO05D001895 2.4e-08 63.2 116 32.8
COL.COLO4_29046 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.1e-08 62.8 94 40.4
Gohir.A02G159400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-08 62.8 109 34.9
Gohir.D04G176033 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.1e-08 62.8 148 31.8
Thecc.04G013200 Theobroma cacao HOM05D002599 ORTHO05D001895 3.1e-08 62.8 90 44.4
Thecc.10G017300 Theobroma cacao HOM05D009631 ORTHO05D011824 3.1e-08 62.8 109 35.8
Gohir.D03G021100 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-08 62.4 109 34.9
Gohir.D12G042600 Gossypium hirsutum HOM05D002599 ORTHO05D001895 4.0e-08 62.4 116 35.3
Gorai.003G022700 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.0e-08 62.4 109 34.9
Gorai.008G044600 Gossypium raimondii HOM05D002599 ORTHO05D001895 4.0e-08 62.4 116 35.3
Thecc.10G017400 Theobroma cacao HOM05D002599 ORTHO05D001895 4.0e-08 62.4 108 36.1
Thecc.02G018800 Theobroma cacao HOM05D002599 ORTHO05D001895 6.9e-08 61.6 112 34.8
Gorai.011G111100 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.2e-07 60.8 111 36.9
Potri.015G017000 Populus trichocarpa HOM05D002599 ORTHO05D001895 1.2e-07 60.8 110 36.4
Gohir.D10G101400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 1.5e-07 60.5 111 38.7
Gorai.012G167300 Gossypium raimondii HOM05D002599 ORTHO05D001895 1.5e-07 60.5 111 36.9
Thecc.01G060200 Theobroma cacao HOM05D002599 ORTHO05D001895 2.0e-07 60.1 114 37.7
Gohir.A01G005400 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-07 59.7 110 36.4
Gohir.D01G042900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-07 59.7 112 33.9
Gohir.D04G175900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 2.6e-07 59.7 111 36.9
Gorai.002G061900 Gossypium raimondii HOM05D002599 ORTHO05D001895 2.6e-07 59.7 112 33.9
Potri.007G099100 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.6e-07 59.7 128 35.2
Manes.10G124500 Manihot esculenta HOM05D002599 ORTHO05D001895 4.5e-07 58.9 129 28.7
Atru.chr4.3203 Acer truncatum HOM05D002599 ORTHO05D001895 5.8e-07 58.5 87 39.1
TWI75G1004 Tripterygium wilfordii HOM05D002599 ORTHO05D001895 5.8e-07 58.5 115 40.0
Gohir.A04G130700 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.6e-07 58.2 111 35.1
Gohir.D01G005500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 7.6e-07 58.2 110 35.5
Gorai.002G006400 Gossypium raimondii HOM05D002599 ORTHO05D001895 7.6e-07 58.2 110 35.5
Thecc.04G013500 Theobroma cacao HOM05D002599 ORTHO05D001895 7.6e-07 58.2 90 41.1
Thecc.10G017800 Theobroma cacao HOM05D002599 ORTHO05D001895 9.9e-07 57.8 116 35.3
Thecc.02G024800 Theobroma cacao HOM05D002599 ORTHO05D001895 1.7e-06 57.0 109 35.8
COL.COLO4_17744 Corchorus olitorius HOM05D002599 ORTHO05D158901 2.2e-06 56.6 48 58.3
Prupe.1G574400 Prunus persica HOM05D002599 ORTHO05D001895 2.2e-06 56.6 85 38.8
COL.COLO4_11745 Corchorus olitorius HOM05D002599 ORTHO05D001895 2.9e-06 56.2 109 35.8
Potri.015G016901 Populus trichocarpa HOM05D002599 ORTHO05D001895 2.9e-06 56.2 97 40.2
COL.COLO4_17739 Corchorus olitorius HOM05D002599 ORTHO05D001895 3.8e-06 55.8 112 33.0
Gohir.A03G214900 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.8e-06 55.8 110 33.6
Gohir.A13G015300 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.8e-06 55.8 112 37.5
Gohir.D13G016500 Gossypium hirsutum HOM05D002599 ORTHO05D001895 3.8e-06 55.8 112 37.5
Gorai.013G018200 Gossypium raimondii HOM05D002599 ORTHO05D001895 3.8e-06 55.8 112 37.5
Prupe.1G574300 Prunus persica HOM05D002599 ORTHO05D001895 3.8e-06 55.8 86 39.5
COL.COLO4_17767 Corchorus olitorius HOM05D002599 ORTHO05D001895 4.9e-06 55.5 113 31.9
Sabra15G0012500 Salix brachista HOM05D002599 ORTHO05D001895 4.9e-06 55.5 111 38.7
Sabra15G0012900 Salix brachista HOM05D002599 ORTHO05D001895 4.9e-06 55.5 110 39.1
Thecc.10G017900 Theobroma cacao HOM05D002599 ORTHO05D001895 4.9e-06 55.5 98 42.9
Manes.10G124600 Manihot esculenta HOM05D002599 ORTHO05D001895 6.4e-06 55.1 103 33.0
Thecc.10G017500 Theobroma cacao HOM05D002599 ORTHO05D001895 6.4e-06 55.1 110 36.4


User provided reference genes

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