Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.8e-205 719.2 398 100.0
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 2.0e-196 689.1 398 96.5
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 7.6e-196 687.2 398 96.5
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 6.3e-150 534.6 406 73.6
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 5.7e-143 511.5 404 73.0
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 2.2e-134 483.0 407 68.6
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 5.5e-130 468.4 368 73.4
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 1.9e-82 310.5 436 47.2
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 7.3e-82 308.5 439 48.1
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 9.6e-82 308.1 432 49.5
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 5.4e-77 292.4 417 49.2
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 9.3e-77 291.6 415 48.4
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 5.1e-75 285.8 414 47.3
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 1.5e-71 274.2 424 45.8
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 8.4e-70 268.5 422 45.5
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 4.2e-69 266.2 418 44.7
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 3.0e-67 260.0 459 42.5
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 8.7e-67 258.5 427 44.0
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 2.5e-66 256.9 424 43.4
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 6.2e-65 252.3 406 45.3
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 3.1e-64 250.0 479 39.7
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 2.0e-63 247.3 411 43.1
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 1.3e-62 244.6 458 41.5
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 4.9e-62 242.7 449 41.2
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 4.9e-62 242.7 419 43.9
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 2.4e-61 240.4 349 47.3
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 7.1e-61 238.8 409 41.6
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 4.3e-58 229.6 410 42.0
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 4.8e-57 226.1 420 43.1
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 1.2e-55 221.5 417 40.0
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 6.5e-54 215.7 415 39.8
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 8.4e-54 215.3 434 41.7
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 7.1e-53 212.2 419 40.8
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 2.1e-52 210.7 469 36.9
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 1.0e-51 208.4 422 39.8
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 2.3e-51 207.2 434 38.7
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 3.0e-51 206.8 365 44.1
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 6.7e-51 205.7 415 40.0
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 1.1e-50 204.9 476 36.1
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 7.4e-50 202.2 422 38.6
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.3e-49 201.4 449 38.5
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 8.2e-49 198.7 390 40.8
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 1.1e-48 198.4 326 42.0
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 2.4e-48 197.2 426 39.0
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 4.1e-48 196.4 405 39.8
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 4.1e-48 196.4 378 41.0
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 5.3e-48 196.1 486 37.9
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 9.0e-48 195.3 386 42.0
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 9.0e-48 195.3 306 42.8
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.5e-47 194.5 389 38.0
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 2.0e-47 194.1 419 39.1
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 7.6e-47 192.2 422 39.1
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 3.8e-46 189.9 375 39.2
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 6.5e-46 189.1 415 38.8
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.1e-45 188.3 427 40.3
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 9.3e-45 185.3 421 36.6
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 9.3e-45 185.3 459 35.5
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 9.3e-45 185.3 390 39.5
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 1.6e-44 184.5 420 39.3
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.0e-43 181.8 424 37.0
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 2.3e-43 180.6 420 36.9
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 3.9e-43 179.9 371 38.8
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 5.1e-43 179.5 426 37.6
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 8.7e-43 178.7 417 37.6
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 1.9e-42 177.6 400 37.5
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.3e-42 176.8 435 37.5
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 9.7e-42 175.3 398 37.4
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 1.6e-41 174.5 375 39.5
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 6.3e-41 172.6 416 37.5
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 1.4e-40 171.4 417 37.9
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.4e-40 171.4 428 38.6
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 3.1e-40 170.2 416 37.7
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 5.3e-40 169.5 419 37.7
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 6.9e-40 169.1 421 35.9
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 2.6e-39 167.2 424 35.8
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 4.2e-37 159.8 428 35.0
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 4.2e-37 159.8 266 41.4
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-36 157.9 258 43.4
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 1.8e-35 154.5 313 40.3
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 6.7e-35 152.5 279 42.3
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 1.7e-33 147.9 274 40.5
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 1.4e-32 144.8 380 35.3
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 1.3e-30 138.3 229 41.5
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 8.5e-30 135.6 202 46.5
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 1.1e-29 135.2 255 40.8
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 4.7e-28 129.8 320 37.8
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 1.4e-27 128.3 338 35.5
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 5.1e-27 126.3 254 39.0
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 6.7e-27 125.9 521 29.8
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 1.1e-24 118.6 118 59.3
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 3.5e-23 113.6 408 31.1
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 2.5e-21 107.5 260 34.6
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 4.5e-15 86.7 222 34.2
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 2.3e-11 74.3 111 44.1
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 2.0e-10 71.2 53 73.6
Oeu018558.1 Olea europaea HOM05D007360 ORTHO05D008235 2.2e-09 67.8 100 40.0
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 4.1e-08 63.5 118 38.1
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 4.1e-08 63.5 66 50.0
MD04G1102800 Malus domestica HOM05D007360 ORTHO05D008235 5.9e-07 59.7 169 36.1


User provided reference genes

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