Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A03G213900 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.4e-35 152.5 81 100.0
Gohir.D02G235400 Gossypium hirsutum HOM05D009338 ORTHO05D010862 2.8e-33 144.8 81 93.8
Gorai.005G263500 Gossypium raimondii HOM05D009338 ORTHO05D010862 5.4e-32 140.6 81 92.6
Thecc.02G028800 Theobroma cacao HOM05D009338 ORTHO05D010862 2.3e-22 108.6 81 72.8
Gohir.A03G214000 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.9e-16 89.0 81 59.3
Gorai.005G263600 Gossypium raimondii HOM05D009338 ORTHO05D010862 2.7e-15 85.1 81 56.8
Gohir.D02G235500 Gossypium hirsutum HOM05D009338 ORTHO05D010862 1.0e-14 83.2 81 55.6
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 6.6e-14 80.5 81 55.6
TAR628G0903 Trochodendron aralioides HOM05D009338 ORTHO05D010862 8.6e-14 80.1 81 55.6
Thecc.02G028900 Theobroma cacao HOM05D009338 ORTHO05D010862 3.3e-13 78.2 84 59.5
CSS0015548 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 7.3e-13 77.0 82 54.9
Manes.17G096800 Manihot esculenta HOM05D009338 ORTHO05D010862 1.6e-12 75.9 80 58.8
QL11p039270 Quercus lobata HOM05D009338 ORTHO05D010862 2.1e-12 75.5 82 53.7
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 6.2e-12 73.9 79 53.2
Cfa004949 Carpinus fangiana HOM05D009338 ORTHO05D010862 8.1e-12 73.6 80 51.2
COL.COLO4_17778 Corchorus olitorius HOM05D009338 ORTHO05D010862 2.3e-11 72.0 127 41.7
Haze_02460 Corylus avellana HOM05D009338 ORTHO05D010862 2.3e-11 72.0 80 56.2
Potri.004G148100 Populus trichocarpa HOM05D009338 ORTHO05D010862 6.8e-11 70.5 80 52.5
Potri.004G147966 Populus trichocarpa HOM05D009338 ORTHO05D010862 5.8e-10 67.4 80 51.2
CSS0004539 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 1.3e-09 66.2 82 50.0
Sabra09G0083400 Salix brachista HOM05D009338 ORTHO05D010862 1.3e-09 66.2 81 48.1
Manes.17G096700 Manihot esculenta HOM05D009338 ORTHO05D010862 2.9e-09 65.1 80 51.2
Nn5g29412 Nelumbo nucifera HOM05D009338 ORTHO05D010862 4.9e-09 64.3 82 46.3
Potri.009G109200 Populus trichocarpa HOM05D009338 ORTHO05D010862 6.4e-09 63.9 82 45.1
Aqoxy6G00946 Aquilegia oxysepala HOM05D009338 ORTHO05D010862 6.0e-07 57.4 82 48.8
Ciclev10029719m.g Citrus clementina HOM05D009338 ORTHO05D010862 1.7e-06 55.8 83 48.2
CiPaw.05G058900 Carya illinoinensis HOM05D009338 ORTHO05D010862 2.3e-06 55.5 79 44.3
Phvul.011G050200 Phaseolus vulgaris HOM05D016074 ORTHO05D010862 2.3e-06 55.5 81 43.2
Glyma.11G123400 Glycine max HOM05D016074 ORTHO05D010862 5.1e-06 54.3 81 42.0
Psat7g207480 Pisum sativum HOM05D016074 ORTHO05D010862 5.1e-06 54.3 85 48.2
Rhsim11G0170900 Rhododendron simsii HOM05D009338 ORTHO05D010862 5.1e-06 54.3 83 44.6
arahy.Tifrunner.gnm1.ann1.GM2IDW Arachis hypogaea HOM05D016074 ORTHO05D010862 8.6e-06 53.5 81 42.0
Glyma.12G048100 Glycine max HOM05D016074 ORTHO05D010862 8.6e-06 53.5 81 44.4


User provided reference genes

Program Settings