Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A03G006140 Gossypium hirsutum HOM05D002756 ORTHO05D002896 5.3e-114 414.5 222 100.0
Gohir.D03G166200 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.6e-107 392.9 222 93.2
Gohir.A03G006260 Gossypium hirsutum HOM05D002756 ORTHO05D002896 5.0e-104 381.3 210 97.1
Gorai.003G175700 Gossypium raimondii HOM05D002756 ORTHO05D002896 1.2e-102 376.7 222 92.3
Gorai.003G175800 Gossypium raimondii HOM05D002756 ORTHO05D002896 6.7e-101 370.9 222 92.3
Duzib205G1850 Durio zibethinus HOM05D002756 ORTHO05D002896 1.5e-36 157.1 456 33.8
Gohir.A12G214900 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.5e-36 157.1 360 40.6
Gohir.D12G217500 Gossypium hirsutum HOM05D002756 ORTHO05D002896 1.5e-36 157.1 360 38.9
Thecc.03G246800 Theobroma cacao HOM05D002756 ORTHO05D002896 1.7e-35 153.7 454 33.7
Gorai.008G233100 Gossypium raimondii HOM05D002756 ORTHO05D002896 8.3e-35 151.4 358 38.0
Duzib068G0659 Durio zibethinus HOM05D002756 ORTHO05D002896 6.0e-33 145.2 457 31.3
Duzib084G0904 Durio zibethinus HOM05D002756 ORTHO05D002896 3.0e-32 142.9 460 33.7
GSVIVG01005822001 Vitis vinifera HOM05D002756 ORTHO05D002896 2.1e-25 120.2 305 38.4
CANSAT21G1520 Cannabis sativa HOM05D002756 ORTHO05D002896 6.0e-25 118.6 360 34.7
Ciclev10019703m.g Citrus clementina HOM05D002756 ORTHO05D002896 3.9e-24 115.9 432 29.4
Atru.chr9.1260 Acer truncatum HOM05D002756 ORTHO05D002896 2.4e-21 106.7 467 30.2
COL.COLO4_37105 Corchorus olitorius HOM05D002756 ORTHO05D002896 3.1e-21 106.3 88 71.6
TWI81G0105 Tripterygium wilfordii HOM05D002756 ORTHO05D002896 3.1e-21 106.3 400 29.2
Haze_07935 Corylus avellana HOM05D002756 ORTHO05D002896 5.2e-21 105.5 395 31.6
vmacro00014 Vaccinium macrocarpon HOM05D002756 ORTHO05D002896 3.4e-20 102.8 412 29.4
Cfa012698 Carpinus fangiana HOM05D002756 ORTHO05D002896 4.9e-19 99.0 416 29.3
Dinv39178 Davidia involucrata HOM05D002756 ORTHO05D002896 9.3e-18 94.7 411 28.5
vmacro22653 Vaccinium macrocarpon HOM05D002756 ORTHO05D002896 2.7e-17 93.2 170 39.4
Eucgr.E00399 Eucalyptus grandis HOM05D002756 ORTHO05D002896 6.0e-17 92.0 156 41.0
DCAR_008518 Daucus carota HOM05D002756 ORTHO05D002896 1.3e-16 90.9 391 29.2
Hma1.2p1_1196F.1_g266030 Hydrangea macrophylla HOM05D002756 ORTHO05D002896 1.7e-16 90.5 423 27.9
Hma1.2p1_1335F.1_g276370 Hydrangea macrophylla HOM05D002756 ORTHO05D002896 1.7e-16 90.5 423 27.9
Actinidia14397 Actinidia chinensis HOM05D002756 ORTHO05D002896 3.0e-16 89.7 381 27.3
Manes.02G041900 Manihot esculenta HOM05D002756 ORTHO05D002896 3.0e-16 89.7 173 39.9
TPR.G37630 Trifolium pratense HOM05D002756 ORTHO05D002896 5.1e-16 89.0 370 30.5
MELO3C013922.2 Cucumis melo HOM05D002756 ORTHO05D002896 8.7e-16 88.2 412 29.6
Rhsim11G0050900 Rhododendron simsii HOM05D002756 ORTHO05D002896 8.7e-16 88.2 410 29.0
Potri.001G155000 Populus trichocarpa HOM05D002756 ORTHO05D002896 1.1e-15 87.8 184 37.0
Cc08_g12030 Coffea canephora HOM05D002756 ORTHO05D002896 1.5e-15 87.4 143 43.4
CSS0004447 Camellia sinensis var. sinensis HOM05D002756 ORTHO05D002896 3.3e-15 86.3 157 40.1
FAN08G2407 Fragaria x ananassa HOM05D002756 ORTHO05D002896 4.3e-15 85.9 168 39.3
HanXRQChr17g0549241 Helianthus annuus HOM05D002756 ORTHO05D002896 4.3e-15 85.9 125 44.8
Sabra03G0049800 Salix brachista HOM05D002756 ORTHO05D002896 4.3e-15 85.9 156 40.4
FvH4_5g19610 Fragaria vesca HOM05D002756 ORTHO05D002896 7.3e-15 85.1 168 39.3
Glyma.19G105000 Glycine max HOM05D002756 ORTHO05D002896 7.3e-15 85.1 86 58.1
QL12p010923 Quercus lobata HOM05D002756 ORTHO05D002896 7.3e-15 85.1 81 61.7
QL12p011144 Quercus lobata HOM05D002756 ORTHO05D002896 7.3e-15 85.1 81 61.7
RcHm_v2.0_Chr7g0204301 Rosa chinensis HOM05D002756 ORTHO05D002896 7.3e-15 85.1 169 38.5
Sc07g0009180 Simmondsia chinensis HOM05D002756 ORTHO05D002896 7.3e-15 85.1 91 54.9
FAN04G0448 Fragaria x ananassa HOM05D002756 ORTHO05D002896 9.6e-15 84.7 168 39.3
FAN18G1828 Fragaria x ananassa HOM05D002756 ORTHO05D002896 9.6e-15 84.7 168 39.3
MD04G1061300 Malus domestica HOM05D002756 ORTHO05D002896 1.3e-14 84.3 80 60.0
Potri.003G079900 Populus trichocarpa HOM05D002756 ORTHO05D002896 1.3e-14 84.3 156 40.4
CAN.G1178.4 Capsicum annuum HOM05D002756 ORTHO05D002896 2.1e-14 83.6 140 42.9
FAN13G0091 Fragaria x ananassa HOM05D002756 ORTHO05D002896 2.1e-14 83.6 168 38.7
CiPaw.11G082800 Carya illinoinensis HOM05D002756 ORTHO05D002896 6.2e-14 82.0 77 59.7
Migut.A01149 Erythranthe guttata HOM05D002756 ORTHO05D002896 1.1e-13 81.3 310 31.3
Lalb_Chr09g0329931 Lupinus albus HOM05D002756 ORTHO05D002896 1.4e-13 80.9 410 27.6
Dinv21670 Davidia involucrata HOM05D002756 ORTHO05D002896 1.8e-13 80.5 156 37.8
Nn6g33844 Nelumbo nucifera HOM05D002756 ORTHO05D002896 1.8e-13 80.5 163 37.4
Medtr4g100530 Medicago truncatula HOM05D002756 ORTHO05D002896 2.4e-13 80.1 385 28.3
Lj8C270T8 Lonicera japonica HOM05D002756 ORTHO05D002896 3.1e-13 79.7 82 58.5
Sabra01G0124600 Salix brachista HOM05D002756 ORTHO05D002896 3.1e-13 79.7 155 39.4
TAR375G0301 Trochodendron aralioides HOM05D002756 ORTHO05D002896 3.1e-13 79.7 152 36.8
EL10Ac5g12331 Beta vulgaris HOM05D002756 ORTHO05D002896 4.0e-13 79.3 100 50.0
Nitab4.5_0002601g0020 Nicotiana tabacum HOM05D002756 ORTHO05D002896 4.0e-13 79.3 166 37.3
Nitab4.5_0007283g0010 Nicotiana tabacum HOM05D002756 ORTHO05D002896 4.0e-13 79.3 142 40.8
Phvul.003G223300 Phaseolus vulgaris HOM05D002756 ORTHO05D002896 9.0e-13 78.2 78 59.0
VMungo0251G0835 Vigna mungo HOM05D002756 ORTHO05D002896 9.0e-13 78.2 78 59.0
Nn6g33847 Nelumbo nucifera HOM05D002756 ORTHO05D002896 1.2e-12 77.8 162 34.6
Psat4g073480 Pisum sativum HOM05D002756 ORTHO05D002896 1.2e-12 77.8 367 29.4
Actinidia02163 Actinidia chinensis HOM05D002756 ORTHO05D002896 1.5e-12 77.4 74 55.4
HanXRQChr06g0164481 Helianthus annuus HOM05D002756 ORTHO05D002896 1.5e-12 77.4 294 30.3
Sopen08g026790 Solanum pennellii HOM05D002756 ORTHO05D002896 1.5e-12 77.4 398 27.6
PGSC0003DMG400026237 Solanum tuberosum HOM05D002756 ORTHO05D002896 2.0e-12 77.0 405 26.4
HPP92_025690 Vanilla planifolia HOM05D002756 ORTHO05D002896 2.0e-12 77.0 284 31.0
HPP92_025695 Vanilla planifolia HOM05D002756 ORTHO05D002896 2.0e-12 77.0 285 31.6
Ah.12g054420 Amaranthus hybridus HOM05D002756 ORTHO05D002896 2.6e-12 76.6 81 55.6
Glyma.17G144800 Glycine max HOM05D002756 ORTHO05D002896 2.6e-12 76.6 81 59.3
CiPaw.12G049400 Carya illinoinensis HOM05D002756 ORTHO05D002896 4.5e-12 75.9 126 41.3
Oeu017053.1 Olea europaea HOM05D002756 ORTHO05D002896 4.5e-12 75.9 119 44.5
Cpa.g.sc89.63 Carica papaya HOM05D002756 ORTHO05D002896 5.8e-12 75.5 260 30.4
Glyma.01G122700 Glycine max HOM05D002756 ORTHO05D002896 5.8e-12 75.5 377 29.2
Lj4g0006676 Lotus japonicus HOM05D002756 ORTHO05D002896 1.7e-11 73.9 85 55.3
TAR629G0742 Trochodendron aralioides HOM05D002756 ORTHO05D002896 1.7e-11 73.9 153 37.3
TAR629G2869 Trochodendron aralioides HOM05D002756 ORTHO05D002896 1.7e-11 73.9 153 37.3
CSS0042834 Camellia sinensis var. sinensis HOM05D002756 ORTHO05D002896 2.2e-11 73.6 90 50.0
SGA_v2.0_scaffold199G41225 Striga asiatica HOM05D002756 ORTHO05D002896 2.2e-11 73.6 377 28.4
ClCG10G002500 Citrullus lanatus HOM05D002756 ORTHO05D002896 2.9e-11 73.2 58 69.0
Solyc08g078290.1 Solanum lycopersicum HOM05D002756 ORTHO05D002896 6.4e-11 72.0 394 27.7
Sed0017596 Sechium edule HOM05D002756 ORTHO05D002896 8.4e-11 71.6 134 40.3
Nitab4.5_0000618g0140 Nicotiana tabacum HOM05D002756 ORTHO05D002896 1.1e-10 71.2 327 26.9
Peaxi162Scf00346g00062 Petunia axillaris HOM05D002756 ORTHO05D002896 1.1e-10 71.2 146 39.7
Lalb_Chr05g0221081 Lupinus albus HOM05D002756 ORTHO05D002896 1.4e-10 70.9 101 50.5
Lalb_Chr16g0386581 Lupinus albus HOM05D002756 ORTHO05D002896 1.4e-10 70.9 87 55.2
Prupe.5G064100 Prunus persica HOM05D002756 ORTHO05D002896 1.9e-10 70.5 104 48.1
CsaV3_3G002530 Cucumis sativus L. HOM05D002756 ORTHO05D002896 2.4e-10 70.1 44 79.5
Sopen06g020970 Solanum pennellii HOM05D002756 ORTHO05D002896 3.2e-10 69.7 289 30.8
AUR62019993 Chenopodium quinoa HOM05D002756 ORTHO05D002896 4.2e-10 69.3 120 42.5
PSO675G5676 Papaver somniferum HOM05D002756 ORTHO05D002896 4.2e-10 69.3 99 45.5
AUR62007124 Chenopodium quinoa HOM05D002756 ORTHO05D002896 7.1e-10 68.6 89 50.6
Peaxi162Scf00190g00123 Petunia axillaris HOM05D002756 ORTHO05D002896 9.3e-10 68.2 339 28.6
CAN.G62.18 Capsicum annuum HOM05D002756 ORTHO05D002896 3.5e-09 66.2 328 27.4
THA.LOC104807911 Tarenaya hassleriana HOM05D002756 ORTHO05D002896 3.5e-09 66.2 142 36.6
PGR042G1682 Punica granatum HOM05D002756 ORTHO05D002896 1.0e-08 64.7 163 36.2
ATR0057G080 Amborella trichopoda HOM05D002756 ORTHO05D002896 2.3e-08 63.5 81 40.7
Aqoxy3G02766 Aquilegia oxysepala HOM05D002756 ORTHO05D002896 2.3e-08 63.5 150 33.3
PSO782G0082 Papaver somniferum HOM05D002756 ORTHO05D002896 3.0e-08 63.2 149 35.6
BcaC07g38020 Brassica carinata HOM05D002756 ORTHO05D002896 3.9e-08 62.8 77 51.9
BolC8t48410H Brassica oleracea HOM05D002756 ORTHO05D002896 3.9e-08 62.8 77 51.9
BraA08t33260Z Brassica rapa HOM05D002756 ORTHO05D002896 3.9e-08 62.8 77 51.9
A08p12710 Brassica napus HOM05D002756 ORTHO05D002896 6.7e-08 62.0 77 51.9
PSO063G5636 Papaver somniferum HOM05D002756 ORTHO05D002896 6.7e-08 62.0 149 35.6
AT4G16790 Arabidopsis thaliana HOM05D002756 ORTHO05D002896 1.1e-07 61.2 100 47.0
Solyc06g060820.2 Solanum lycopersicum HOM05D002756 ORTHO05D002896 1.1e-07 61.2 294 29.6
Sp7g17320 Schrenkiella parvula HOM05D002756 ORTHO05D002896 1.9e-07 60.5 40 80.0
AL7G37860 Arabidopsis lyrata HOM05D002756 ORTHO05D002896 2.5e-07 60.1 87 50.6
CARHR223410 Cardamine hirsuta HOM05D002756 ORTHO05D002896 3.3e-07 59.7 41 75.6
Glyma.05G062801 Glycine max HOM05D002756 ORTHO05D002896 3.3e-07 59.7 80 53.8
Lalb_Chr16g0386561 Lupinus albus HOM05D002756 ORTHO05D002896 4.3e-07 59.3 95 45.3
Nitab4.5_0002206g0010 Nicotiana tabacum HOM05D002756 ORTHO05D002896 4.3e-07 59.3 126 36.5
BolC1t02520H Brassica oleracea HOM05D002756 ORTHO05D002896 5.6e-07 58.9 374 25.1
Aa31LG2G12970 Aethionema arabicum HOM05D002756 ORTHO05D002896 7.4e-07 58.5 69 50.7
BcaC09g50418 Brassica carinata HOM05D002756 ORTHO05D002896 7.4e-07 58.5 56 58.9
C01p25660 Brassica napus HOM05D002756 ORTHO05D002896 7.4e-07 58.5 56 58.9
Carub.0007s2457 Capsella rubella HOM05D002756 ORTHO05D002896 7.4e-07 58.5 100 47.0
Dinv44072 Davidia involucrata HOM05D001866 ORTHO05D002896 1.6e-06 57.4 145 33.1
MD06G1054900 Malus domestica HOM05D002756 ORTHO05D002896 1.6e-06 57.4 101 46.5
Thhalv10024963m.g Eutrema salsugineum HOM05D002756 ORTHO05D002896 2.1e-06 57.0 40 77.5
Ca_21993_v3 Cicer arietinum L. HOM05D002756 ORTHO05D002896 3.6e-06 56.2 54 57.4
A01p20420 Brassica napus HOM05D002756 ORTHO05D002896 4.8e-06 55.8 95 45.3
BraA01t01971Z Brassica rapa HOM05D002756 ORTHO05D002896 4.8e-06 55.8 95 45.3
arahy.Tifrunner.gnm1.ann1.73EWJC Arachis hypogaea HOM05D002756 ORTHO05D002896 6.2e-06 55.5 38 73.7
arahy.Tifrunner.gnm1.ann1.X0SKZJ Arachis hypogaea HOM05D002756 ORTHO05D002896 6.2e-06 55.5 38 73.7
SHI07780 Sapria himalayana HOM05D002756 ORTHO05D002896 8.1e-06 55.1 251 28.7


User provided reference genes

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