Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 2.0e-65 252.7 168 100.0
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 7.2e-63 244.2 168 97.0
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.5e-62 241.9 168 96.4
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 6.3e-51 204.5 168 84.5
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 5.9e-49 198.0 170 84.7
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 1.4e-42 176.8 168 74.4
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 2.6e-41 172.6 168 76.2
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 1.7e-40 169.9 164 77.4
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 1.7e-40 169.9 167 78.4
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 3.8e-40 168.7 170 76.5
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 6.5e-40 167.9 162 75.9
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 1.9e-39 166.4 169 76.3
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 2.5e-39 166.0 172 73.8
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 7.2e-39 164.5 164 74.4
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 1.2e-38 163.7 104 80.8
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 1.8e-37 159.8 170 72.4
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 5.2e-37 158.3 163 73.0
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 3.3e-36 155.6 170 72.9
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 4.4e-36 155.2 168 70.8
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 2.2e-35 152.9 168 70.2
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.2e-35 152.9 164 73.8
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 2.2e-35 152.9 164 73.8
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.8e-35 152.5 166 72.3
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 3.7e-35 152.1 166 72.9
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 3.7e-35 152.1 166 72.9
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 4.8e-35 151.8 172 70.3
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 6.3e-35 151.4 167 74.3
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 8.2e-35 151.0 171 70.2
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 1.1e-34 150.6 163 74.8
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 3.1e-34 149.1 171 72.5
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 4.1e-34 148.7 174 67.8
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 5.3e-34 148.3 169 69.8
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 7.0e-34 147.9 163 73.6
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 9.1e-34 147.5 163 73.6
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 9.1e-34 147.5 166 71.1
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 9.1e-34 147.5 169 69.8
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.2e-33 147.1 163 68.7
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.6e-33 146.7 172 66.9
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 2.0e-33 146.4 163 73.0
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 2.0e-33 146.4 175 70.3
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 2.0e-33 146.4 164 71.3
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 2.7e-33 146.0 163 73.6
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 2.7e-33 146.0 163 73.0
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 2.7e-33 146.0 163 73.0
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 2.7e-33 146.0 178 69.1
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.7e-33 146.0 165 70.9
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 2.7e-33 146.0 172 66.3
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 3.5e-33 145.6 164 73.2
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 5.9e-33 144.8 166 70.5
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 1.3e-32 143.7 164 75.0
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 1.3e-32 143.7 168 71.4
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.3e-32 143.7 166 69.9
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.7e-32 143.3 171 69.0
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 2.9e-32 142.5 164 72.0
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 2.9e-32 142.5 164 70.7
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 3.8e-32 142.1 159 73.6
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 3.8e-32 142.1 164 73.2
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 5.0e-32 141.7 165 70.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.5e-31 140.2 163 72.4
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 3.2e-31 139.0 164 73.8
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 3.2e-31 139.0 165 69.7
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 3.2e-31 139.0 168 71.4
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 5.5e-31 138.3 165 71.5
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 7.2e-31 137.9 139 77.7
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 7.2e-31 137.9 115 90.4
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 7.2e-31 137.9 115 90.4
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 7.2e-31 137.9 163 71.2
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 9.4e-31 137.5 166 66.9
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 9.4e-31 137.5 172 66.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 2.1e-30 136.3 170 68.2
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 3.6e-30 135.6 163 71.2
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 4.7e-30 135.2 133 79.7
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 6.1e-30 134.8 134 76.9
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 8.0e-30 134.4 127 82.7
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 1.4e-29 133.7 134 80.6
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.0e-29 132.5 108 69.4
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 2.0e-28 129.8 129 79.1
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 5.7e-28 128.3 161 60.2
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 7.5e-28 127.9 127 61.4
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 2.2e-27 126.3 128 78.1
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 6.3e-27 124.8 127 67.7
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 1.1e-26 124.0 132 75.8
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.8e-26 123.2 127 78.7
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 7.0e-26 121.3 164 66.5
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 5.0e-24 115.2 155 67.1
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 2.5e-23 112.8 161 67.1
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 3.2e-23 112.5 145 46.2
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 4.2e-23 112.1 119 76.5
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 9.4e-23 110.9 99 65.7
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.1e-22 109.8 111 79.3
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 6.1e-22 108.2 125 73.6
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 3.0e-21 105.9 170 61.2
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 7.0e-18 94.7 130 67.7
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 1.2e-17 94.0 129 65.9
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.5e-17 92.4 128 46.1
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 2.9e-16 89.4 124 66.9
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 2.8e-14 82.8 89 71.9
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 6.8e-13 78.2 65 60.0
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 8.9e-13 77.8 119 63.0
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 1.3e-11 73.9 105 40.0
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.2e-11 73.2 131 58.8
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 4.1e-10 68.9 96 46.9
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 1.6e-06 57.0 33 84.8


User provided reference genes

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