Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.6e-43 177.6 93 100.0
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.6e-43 177.6 93 100.0
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.7e-42 175.6 93 98.9
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 9.5e-33 143.3 95 86.3
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 2.8e-32 141.7 95 85.3
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 3.2e-28 128.3 97 81.4
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 4.6e-27 124.4 97 72.2
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.3e-26 122.1 96 72.9
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 5.1e-26 120.9 92 77.2
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 7.3e-25 117.1 92 75.0
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 1.6e-24 115.9 94 72.3
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 8.9e-23 110.2 94 69.1
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 3.4e-22 108.2 98 65.3
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 7.6e-22 107.1 98 66.3
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 1.3e-21 106.3 93 66.7
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 2.9e-21 105.1 92 67.4
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.9e-21 105.1 90 67.8
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 3.7e-21 104.8 93 63.4
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 6.4e-21 104.0 90 66.7
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-21 104.0 90 66.7
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-21 104.0 90 65.6
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.4e-21 104.0 90 65.6
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 8.4e-21 103.6 97 63.9
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 8.4e-21 103.6 100 65.0
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.9e-20 102.4 93 63.4
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 2.4e-20 102.1 94 68.1
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 7.1e-20 100.5 96 59.4
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 7.1e-20 100.5 96 59.4
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 7.1e-20 100.5 96 59.4
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 9.2e-20 100.1 96 61.5
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 2.1e-19 99.0 91 60.4
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 2.1e-19 99.0 96 62.5
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 2.1e-19 99.0 96 62.5
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.7e-19 98.6 105 58.1
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 2.7e-19 98.6 96 61.5
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 2.7e-19 98.6 93 65.6
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 4.6e-19 97.8 96 57.3
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 4.6e-19 97.8 95 62.1
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 6.0e-19 97.4 95 60.0
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 1.0e-18 96.7 94 62.8
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 1.7e-18 95.9 97 56.7
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 3.0e-18 95.1 89 58.4
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 3.0e-18 95.1 87 60.9
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 5.1e-18 94.4 90 63.3
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 6.6e-18 94.0 91 60.4
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 6.6e-18 94.0 101 56.4
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 6.6e-18 94.0 101 58.4
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 8.6e-18 93.6 94 66.0
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 1.9e-17 92.4 95 57.9
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.5e-17 92.0 89 59.6
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 4.3e-17 91.3 97 56.7
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 5.6e-17 90.9 99 55.6
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 5.6e-17 90.9 87 64.4
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 5.6e-17 90.9 87 64.4
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 7.3e-17 90.5 73 68.5
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 2.1e-16 89.0 91 56.0
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 3.6e-16 88.2 87 62.1
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 1.1e-15 86.7 93 57.0
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 5.2e-15 84.3 86 59.3
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 6.8e-15 84.0 57 82.5
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 8.9e-15 83.6 97 53.6
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 8.9e-15 83.6 86 59.3
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 1.5e-14 82.8 83 62.7
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 2.0e-14 82.4 68 67.6
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.6e-14 82.0 60 73.3
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 3.4e-14 81.6 92 55.4
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.9e-13 78.6 90 53.3
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 4.9e-13 77.8 94 50.0
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.4e-13 77.4 91 50.5
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 8.4e-13 77.0 85 55.3
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 7.1e-12 73.9 63 65.1
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.6e-11 72.8 66 63.6
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 1.5e-09 66.2 78 52.6
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 1.9e-09 65.9 99 46.5
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 1.8e-07 59.3 50 66.0


User provided reference genes

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