Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A02G071601 Gossypium hirsutum HOM05D006317 ORTHO05D007852 2.8e-22 107.8 59 100.0
Duzib041G0795 Durio zibethinus HOM05D006317 ORTHO05D007852 2.9e-19 97.8 58 93.1
Duzib116G0606 Durio zibethinus HOM05D006317 ORTHO05D007852 2.9e-19 97.8 58 93.1
Thecc.08G132100 Theobroma cacao HOM05D006317 ORTHO05D007852 2.9e-19 97.8 58 93.1
COL.COLO4_05688 Corchorus olitorius HOM05D006317 ORTHO05D007852 6.5e-19 96.7 58 91.4
Gohir.A05G237800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.4e-18 95.5 58 91.4
Gohir.D05G239800 Gossypium hirsutum HOM05D006317 ORTHO05D007852 1.4e-18 95.5 58 91.4
Gorai.009G248700 Gossypium raimondii HOM05D006317 ORTHO05D007852 1.4e-18 95.5 58 91.4
Phvul.009G129100 Phaseolus vulgaris HOM05D006317 ORTHO05D007852 1.4e-18 95.5 58 91.4
TAR375G0871 Trochodendron aralioides HOM05D006317 ORTHO05D007852 1.4e-18 95.5 58 91.4
ClCG08G005990 Citrullus lanatus HOM05D006317 ORTHO05D007852 1.9e-18 95.1 58 89.7
Atru.chr13.1550 Acer truncatum HOM05D006317 ORTHO05D007852 2.5e-18 94.7 58 89.7
Cpa.g.sc64.145 Carica papaya HOM05D006317 ORTHO05D007852 2.5e-18 94.7 58 89.7
Sed0004620 Sechium edule HOM05D006317 ORTHO05D007852 2.5e-18 94.7 58 89.7
TWI32G0551 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 3.2e-18 94.4 58 89.7
Glyma.04G246100 Glycine max HOM05D006317 ORTHO05D007852 4.2e-18 94.0 58 87.9
Ciclev10002865m.g Citrus clementina HOM05D006317 ORTHO05D007852 5.5e-18 93.6 58 86.2
VMungo1309G0699 Vigna mungo HOM05D006317 ORTHO05D007852 7.2e-18 93.2 58 89.7
MELO3C010655.2 Cucumis melo HOM05D006317 ORTHO05D007852 9.4e-18 92.8 58 87.9
CsaV3_6G034090 Cucumis sativus L. HOM05D006317 ORTHO05D007852 9.4e-18 92.8 58 87.9
TWI34G0863 Tripterygium wilfordii HOM05D006317 ORTHO05D007852 9.4e-18 92.8 58 87.9
Lj1g0010212 Lotus japonicus HOM05D006317 ORTHO05D007852 1.2e-17 92.4 58 87.9
Manes.18G081900 Manihot esculenta HOM05D006317 ORTHO05D007852 1.2e-17 92.4 58 87.9
Eucgr.D00248 Eucalyptus grandis HOM05D006317 ORTHO05D007852 1.6e-17 92.0 58 86.2
Glyma.06G116700 Glycine max HOM05D006317 ORTHO05D007852 2.1e-17 91.7 58 86.2
Manes.02G167400 Manihot esculenta HOM05D006317 ORTHO05D007852 2.1e-17 91.7 58 86.2
Dinv14667 Davidia involucrata HOM05D006317 ORTHO05D007852 3.6e-17 90.9 58 84.5
FvH4_2g27730 Fragaria vesca HOM05D006317 ORTHO05D007852 4.6e-17 90.5 58 84.5
FAN20G1754 Fragaria x ananassa HOM05D006317 ORTHO05D007852 4.6e-17 90.5 58 84.5
FAN24G3505 Fragaria x ananassa HOM05D006317 ORTHO05D007852 4.6e-17 90.5 58 84.5
Medtr3g088525 Medicago truncatula HOM05D006317 ORTHO05D007852 4.6e-17 90.5 58 86.2
GSVIVG01036785001 Vitis vinifera HOM05D006317 ORTHO05D007852 4.6e-17 90.5 58 86.2
Lalb_Chr08g0241161 Lupinus albus HOM05D006317 ORTHO05D007852 6.1e-17 90.1 58 86.2
PGR044G1554 Punica granatum HOM05D006317 ORTHO05D007852 6.1e-17 90.1 58 86.2
Nn1g09356 Nelumbo nucifera HOM05D006317 ORTHO05D007852 7.9e-17 89.7 58 84.5
Prupe.1G490600 Prunus persica HOM05D006317 ORTHO05D007852 1.0e-16 89.4 58 84.5
Sc10g0008060 Simmondsia chinensis HOM05D006317 ORTHO05D007852 1.0e-16 89.4 58 82.8
arahy.Tifrunner.gnm1.ann1.0GY0RD Arachis hypogaea HOM05D006317 ORTHO05D007852 1.4e-16 89.0 58 82.8
arahy.Tifrunner.gnm1.ann1.ID1H8K Arachis hypogaea HOM05D006317 ORTHO05D007852 1.4e-16 89.0 58 82.8
Dinv27277 Davidia involucrata HOM05D006317 ORTHO05D007852 1.4e-16 89.0 58 84.5
FAN27G3154 Fragaria x ananassa HOM05D006317 ORTHO05D007852 1.4e-16 89.0 58 82.8
Lalb_Chr23g0271161 Lupinus albus HOM05D006317 ORTHO05D007852 1.4e-16 89.0 58 86.2
RcHm_v2.0_Chr6g0296581 Rosa chinensis HOM05D006317 ORTHO05D007852 1.4e-16 89.0 58 84.5
Sed0014816 Sechium edule HOM05D006317 ORTHO05D007852 1.4e-16 89.0 58 86.2
ATR1101G062 Amborella trichopoda HOM05D006317 ORTHO05D007852 1.8e-16 88.6 58 82.8
Psat5g085080 Pisum sativum HOM05D006317 ORTHO05D007852 2.3e-16 88.2 58 84.5
CiPaw.15G032500 Carya illinoinensis HOM05D006317 ORTHO05D007852 3.0e-16 87.8 58 84.5
Cfa018120 Carpinus fangiana HOM05D006317 ORTHO05D007852 3.9e-16 87.4 58 82.8
Aa31LG4G7370 Aethionema arabicum HOM05D006317 ORTHO05D007852 5.1e-16 87.0 58 84.5
QL09p032738 Quercus lobata HOM05D006317 ORTHO05D007852 5.1e-16 87.0 58 82.8
CDE07G1891 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 6.7e-16 86.7 58 81.0
vmacro16444 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 6.7e-16 86.7 58 79.3
Hma1.2p1_0420F.1_g149670 Hydrangea macrophylla HOM05D006317 ORTHO05D007852 8.8e-16 86.3 58 81.0
THA.LOC104813677 Tarenaya hassleriana HOM05D006317 ORTHO05D007852 8.8e-16 86.3 58 84.5
Potri.019G066600 Populus trichocarpa HOM05D006317 ORTHO05D007852 1.1e-15 85.9 57 82.5
MBI03_g35425_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 1.5e-15 85.5 58 79.3
Rhsim11G0071000 Rhododendron simsii HOM05D006317 ORTHO05D007852 1.9e-15 85.1 58 79.3
Sabra19G0078300 Salix brachista HOM05D006317 ORTHO05D007852 2.5e-15 84.7 57 80.7
DCAR_018876 Daucus carota HOM05D006317 ORTHO05D007852 3.3e-15 84.3 58 81.0
EL10Ac9g21899 Beta vulgaris HOM05D006317 ORTHO05D007852 4.3e-15 84.0 58 77.6
Actinidia29484 Actinidia chinensis HOM05D006317 ORTHO05D007852 5.7e-15 83.6 58 79.3
CSS0008085 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 5.7e-15 83.6 58 77.6
CSS0027136 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 5.7e-15 83.6 58 77.6
CANSAT35G0412 Cannabis sativa HOM05D006317 ORTHO05D007852 5.7e-15 83.6 58 81.0
CARHR070830 Cardamine hirsuta HOM05D006317 ORTHO05D007852 5.7e-15 83.6 58 81.0
CDE06G2198 Ceratophyllum demersum HOM05D006317 ORTHO05D007852 5.7e-15 83.6 58 77.6
Thhalv10019323m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 7.4e-15 83.2 58 81.0
MSTRG.25364 Avicennia marina HOM05D006317 ORTHO05D007852 9.7e-15 82.8 58 77.6
A08p28870 Brassica napus HOM05D006317 ORTHO05D007852 9.7e-15 82.8 58 81.0
CSS0006686 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 9.7e-15 82.8 58 75.9
Carub.0002s2423 Capsella rubella HOM05D006317 ORTHO05D007852 1.3e-14 82.4 58 79.3
C08p20980 Brassica napus HOM05D006317 ORTHO05D007852 1.7e-14 82.0 58 79.3
BolC8t49735H Brassica oleracea HOM05D006317 ORTHO05D007852 1.7e-14 82.0 58 79.3
Cc10_g12550 Coffea canephora HOM05D006317 ORTHO05D007852 1.7e-14 82.0 58 75.9
Lsat_1_v5_gn_6_109060 Lactuca sativa HOM05D006317 ORTHO05D007852 1.7e-14 82.0 58 79.3
Nitab4.5_0001168g0010 Nicotiana tabacum HOM05D006317 ORTHO05D007852 2.8e-14 81.3 58 74.1
Solyc11g005000.2 Solanum lycopersicum HOM05D006317 ORTHO05D007852 2.8e-14 81.3 58 74.1
Ah.01g020580 Amaranthus hybridus HOM05D006317 ORTHO05D007852 3.7e-14 80.9 58 74.1
Aqoxy1G01739 Aquilegia oxysepala HOM05D006317 ORTHO05D007852 4.8e-14 80.5 58 77.6
PGSC0003DMG400006049 Solanum tuberosum HOM05D006317 ORTHO05D007852 4.8e-14 80.5 58 74.1
vmacro00858 Vaccinium macrocarpon HOM05D006317 ORTHO05D007852 4.8e-14 80.5 58 75.9
BcaC06g34898 Brassica carinata HOM05D006317 ORTHO05D007852 6.3e-14 80.1 57 78.9
A07p14980 Brassica napus HOM05D006317 ORTHO05D007852 6.3e-14 80.1 57 78.9
BolC7t42733H Brassica oleracea HOM05D006317 ORTHO05D007852 6.3e-14 80.1 57 78.9
BraA07t29244Z Brassica rapa HOM05D006317 ORTHO05D007852 6.3e-14 80.1 57 78.9
BraA08t34818Z Brassica rapa HOM05D006317 ORTHO05D007852 6.3e-14 80.1 58 77.6
AUR62016336 Chenopodium quinoa HOM05D006317 ORTHO05D007852 6.3e-14 80.1 58 74.1
ECA246G3352 Erigeron canadensis HOM05D006317 ORTHO05D007852 6.3e-14 80.1 58 77.6
Migut.N03266 Erythranthe guttata HOM05D006317 ORTHO05D007852 6.3e-14 80.1 58 75.9
Thhalv10009123m.g Eutrema salsugineum HOM05D006317 ORTHO05D007852 6.3e-14 80.1 58 77.6
Sopen11g001020 Solanum pennellii HOM05D006317 ORTHO05D007852 6.3e-14 80.1 58 72.4
BcaB07g32159 Brassica carinata HOM05D006317 ORTHO05D007852 8.2e-14 79.7 58 77.6
CAN.G342.14 Capsicum annuum HOM05D006317 ORTHO05D007852 8.2e-14 79.7 58 72.4
Sp1g19190 Schrenkiella parvula HOM05D006317 ORTHO05D007852 8.2e-14 79.7 58 77.6
BcaB03g14259 Brassica carinata HOM05D006317 ORTHO05D007852 1.1e-13 79.3 58 75.9
A06p17730 Brassica napus HOM05D006317 ORTHO05D007852 1.1e-13 79.3 58 77.6
Nitab4.5_0002045g0100 Nicotiana tabacum HOM05D006317 ORTHO05D007852 1.1e-13 79.3 58 72.4
Peaxi162Scf01003g00121 Petunia axillaris HOM05D006317 ORTHO05D007852 1.1e-13 79.3 58 72.4
AL2G37550 Arabidopsis lyrata HOM05D006317 ORTHO05D007852 1.4e-13 79.0 59 79.7
unitig_22.g5398 Utricularia gibba HOM05D006317 ORTHO05D007852 1.4e-13 79.0 58 74.1
C07p22030 Brassica napus HOM05D006317 ORTHO05D007852 1.8e-13 78.6 56 78.6
BraA06t24865Z Brassica rapa HOM05D006317 ORTHO05D007852 1.8e-13 78.6 58 75.9
AT1G77350 Arabidopsis thaliana HOM05D006317 ORTHO05D007852 2.4e-13 78.2 59 78.0
Oeu021883.1 Olea europaea HOM05D006317 ORTHO05D007852 3.1e-13 77.8 58 74.1
unitig_8.g3836 Utricularia gibba HOM05D006317 ORTHO05D007852 3.1e-13 77.8 58 72.4
Oeu051968.1 Olea europaea HOM05D006317 ORTHO05D007852 4.1e-13 77.4 58 74.1
SGA_v2.0_scaffold25G11134 Striga asiatica HOM05D006317 ORTHO05D007852 6.9e-13 76.6 58 72.4
HPP92_021212 Vanilla planifolia HOM05D006317 ORTHO05D007852 1.2e-12 75.9 58 72.4
HanXRQChr05g0148711 Helianthus annuus HOM05D006317 ORTHO05D007852 3.4e-12 74.3 51 80.4
AagrBONN_evm.TU.Sc2ySwM_344.4689 Anthoceros agrestis HOM05D006317 ORTHO05D007852 4.5e-12 73.9 58 65.5
Mapoly0014s0111 Marchantia polymorpha HOM05D006317 ORTHO05D007852 4.5e-12 73.9 58 65.5
SalBow2G0856 Salvia bowleyana HOM05D006317 ORTHO05D007852 5.9e-12 73.6 58 69.0
CBR_g12067 Chara braunii HOM05D006317 ORTHO05D007852 2.9e-11 71.2 52 73.1
MBI06_g36652_MAGBIO Magnolia biondii HOM05D006317 ORTHO05D007852 5.0e-11 70.5 50 78.0
SMO298G0052 Selaginella moellendorffii HOM05D006317 ORTHO05D007852 5.5e-10 67.0 52 71.2
Zm00001eb128810 Zea mays HOM05D006317 ORTHO05D007852 5.5e-10 67.0 58 65.5
SGA_v2.0_scaffold28G11977 Striga asiatica HOM05D006317 ORTHO05D007852 2.1e-09 65.1 52 71.2
Os05g0486200 Oryza sativa ssp. japonica HOM05D006317 ORTHO05D007852 4.7e-09 63.9 52 69.2
BolC5t30761H Brassica oleracea HOM05D006317 ORTHO05D007852 1.0e-08 62.8 52 71.2
SHI09189 Sapria himalayana HOM05D006317 ORTHO05D007852 2.3e-08 61.6 69 58.0
CSS0043705 Camellia sinensis var. sinensis HOM05D006317 ORTHO05D007852 3.3e-07 57.8 35 82.9
Nn7g37402 Nelumbo nucifera HOM05D006317 ORTHO05D007852 3.3e-07 57.8 35 85.7
BcaB03g14260 Brassica carinata HOM05D006317 ORTHO05D007852 2.8e-06 54.7 38 81.6


User provided reference genes

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