Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A02G069600 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.7e-35 151.4 72 100.0
Gorai.006G234500 Gossypium raimondii HOM05D001966 ORTHO05D010449 2.0e-22 108.6 64 82.8
Gohir.D02G173601 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.6e-22 108.2 71 76.1
BcaC04g20781 Brassica carinata HOM05D001966 ORTHO05D010449 7.6e-22 106.7 59 86.4
BcaNung01515 Brassica carinata HOM05D001966 ORTHO05D010449 7.6e-22 106.7 59 86.4
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 7.6e-22 106.7 59 86.4
BraSC138t45527Z Brassica rapa HOM05D001966 ORTHO05D010449 7.6e-22 106.7 59 86.4
BraSC25t45919Z Brassica rapa HOM05D001966 ORTHO05D010449 7.6e-22 106.7 59 86.4
BraSC59t46542Z Brassica rapa HOM05D001966 ORTHO05D010449 7.6e-22 106.7 59 86.4
Cpa.g.c43052.2 Carica papaya HOM05D001966 ORTHO05D010449 7.6e-22 106.7 59 86.4
Potri.011G074100 Populus trichocarpa HOM05D001966 ORTHO05D010449 1.0e-21 106.3 59 84.7
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.0e-21 106.3 59 86.4
Gohir.A05G323716 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.2e-21 105.1 59 84.7
Gohir.A09G102700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.2e-21 105.1 59 84.7
Hma1.2p1_0642F.1_g194360 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 2.2e-21 105.1 59 83.1
FAN06G1313 Fragaria x ananassa HOM05D001966 ORTHO05D010449 2.9e-21 104.8 59 84.7
Nn029s41585 Nelumbo nucifera HOM05D001966 ORTHO05D010449 5.0e-21 104.0 59 84.7
Nn064s42222 Nelumbo nucifera HOM05D001966 ORTHO05D010449 5.0e-21 104.0 59 84.7
Nn212s45202 Nelumbo nucifera HOM05D001966 ORTHO05D010449 5.0e-21 104.0 59 84.7
Nn264s45946 Nelumbo nucifera HOM05D001966 ORTHO05D010449 5.0e-21 104.0 59 84.7
arahy.Tifrunner.gnm1.ann1.818UAU Arachis hypogaea HOM05D001966 ORTHO05D010449 6.5e-21 103.6 59 84.7
Cpa.g.c38922 Carica papaya HOM05D001966 ORTHO05D010449 1.1e-20 102.8 59 83.1
Phvul.006G154100 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 1.1e-20 102.8 59 84.7
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.4e-20 102.4 62 79.0
EL10Ac8g19703 Beta vulgaris HOM05D001966 ORTHO05D010449 2.5e-20 101.7 59 81.4
Nn8g40933 Nelumbo nucifera HOM05D001966 ORTHO05D010449 3.2e-20 101.3 59 83.1
Ca_03784_v3 Cicer arietinum L. HOM05D001966 ORTHO05D010449 4.2e-20 100.9 59 83.1
Lj3g0016717 Lotus japonicus HOM05D001966 ORTHO05D010449 4.2e-20 100.9 59 84.7
Gohir.A10G065960 Gossypium hirsutum HOM05D001966 ORTHO05D010449 7.1e-20 100.1 59 83.1
Gohir.D12G084201 Gossypium hirsutum HOM05D001966 ORTHO05D010449 3.5e-19 97.8 59 81.4
Gohir.A09G034500 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.3e-18 95.9 58 81.0
Gohir.A06G105700 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.8e-18 95.5 59 79.7
Glyma.08G269900 Glycine max HOM05D001966 ORTHO05D010449 1.5e-17 92.4 59 74.6
Gorai.008G094200 Gossypium raimondii HOM05D001966 ORTHO05D010449 2.5e-17 91.7 59 74.6
arahy.Tifrunner.gnm1.ann1.11UFCR Arachis hypogaea HOM05D001966 ORTHO05D010449 9.7e-17 89.7 62 71.0
SHI36541 Sapria himalayana HOM05D001966 ORTHO05D010449 1.4e-15 85.9 51 80.4
Hma1.2p1_0236F.1_g099130 Hydrangea macrophylla HOM05D001966 ORTHO05D010449 1.2e-14 82.8 50 78.0
Gorai.007G250500 Gossypium raimondii HOM05D001966 ORTHO05D010449 4.5e-14 80.9 44 81.8
Phvul.002G203800 Phaseolus vulgaris HOM05D001966 ORTHO05D010449 1.7e-13 79.0 43 86.0
Gohir.D11G237220 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.9e-12 75.5 46 76.1
Gohir.D09G072950 Gossypium hirsutum HOM05D001966 ORTHO05D010449 2.1e-11 72.0 41 82.9
TPR.G18587 Trifolium pratense HOM05D001966 ORTHO05D010449 4.6e-11 70.9 41 78.0
arahy.Tifrunner.gnm1.ann1.A6TYH4 Arachis hypogaea HOM05D001966 ORTHO05D010449 1.8e-10 68.9 38 81.6
arahy.Tifrunner.gnm1.ann1.EPN6WV Arachis hypogaea HOM05D001966 ORTHO05D010449 1.8e-10 68.9 38 81.6
LjContig00319g0014927 Lotus japonicus HOM05D001966 ORTHO05D007227 1.1e-09 66.2 38 84.2
Lj4g0021959 Lotus japonicus HOM05D008259 ORTHO05D010449 2.5e-09 65.1 38 76.3
A02p28440 Brassica napus HOM05D001966 ORTHO05D010449 4.8e-08 60.8 41 65.9
BraA02t07879Z Brassica rapa HOM05D001966 ORTHO05D010449 4.8e-08 60.8 41 65.9
Aqoxy4G03063 Aquilegia oxysepala HOM05D000710 ORTHO05D010449 8.2e-08 60.1 39 71.8
Gohir.D02G151976 Gossypium hirsutum HOM05D001966 ORTHO05D010449 1.8e-07 58.9 43 69.8
Psat5g167880 Pisum sativum HOM05D000009 ORTHO05D000008 1.8e-07 58.9 31 87.1
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 3.1e-07 58.2 31 87.1
SHI23682 Sapria himalayana HOM05D001966 ORTHO05D010449 1.5e-06 55.8 31 80.6
Psat4g168320 Pisum sativum HOM05D004182 ORTHO05D007321 2.6e-06 55.1 32 78.1
arahy.Tifrunner.gnm1.ann1.PU3CYV Arachis hypogaea HOM05D001966 ORTHO05D010449 7.7e-06 53.5 38 65.8


User provided reference genes

Program Settings