Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A02G045400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.8e-34 148.7 74 100.0
Gohir.D02G051400 Gossypium hirsutum HOM05D006941 ORTHO05D008361 1.8e-34 148.7 74 100.0
Gorai.005G056700 Gossypium raimondii HOM05D006941 ORTHO05D008361 4.0e-34 147.5 74 98.6
Thecc.04G275300 Theobroma cacao HOM05D006941 ORTHO05D008361 1.9e-31 138.7 74 89.2
Duzib151G0434 Durio zibethinus HOM05D006941 ORTHO05D008361 5.4e-31 137.1 72 91.7
Manes.03G190000 Manihot esculenta HOM05D006941 ORTHO05D008361 1.0e-29 132.9 72 87.5
Eucgr.H03682 Eucalyptus grandis HOM05D006941 ORTHO05D008361 8.7e-29 129.8 74 82.4
Eucgr.H03704 Eucalyptus grandis HOM05D006941 ORTHO05D008361 2.5e-28 128.3 74 81.1
Carub.0005s2918 Capsella rubella HOM05D006941 ORTHO05D008361 3.3e-28 127.9 72 84.7
Manes.14G117300 Manihot esculenta HOM05D006941 ORTHO05D008361 4.3e-28 127.5 72 83.3
PGR004G2827 Punica granatum HOM05D006941 ORTHO05D008361 4.3e-28 127.5 72 83.3
FvH4_4g16990 Fragaria vesca HOM05D006941 ORTHO05D008361 5.6e-28 127.1 72 83.3
FAN07G2315 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.6e-28 127.1 72 83.3
FAN12G1403 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.6e-28 127.1 72 83.3
FAN12G3786 Fragaria x ananassa HOM05D006941 ORTHO05D008361 5.6e-28 127.1 72 83.3
Oeu010965.1 Olea europaea HOM05D006941 ORTHO05D008361 7.3e-28 126.7 72 86.1
Rhsim02G0014500 Rhododendron simsii HOM05D006941 ORTHO05D008361 7.3e-28 126.7 72 84.7
CARHR172790 Cardamine hirsuta HOM05D006941 ORTHO05D008361 1.3e-27 125.9 70 82.9
Oeu029280.1 Olea europaea HOM05D006941 ORTHO05D008361 1.3e-27 125.9 72 86.1
Prupe.1G143700 Prunus persica HOM05D006941 ORTHO05D008361 1.3e-27 125.9 72 81.9
CANSAT78G0092 Cannabis sativa HOM05D006941 ORTHO05D008361 2.1e-27 125.2 72 80.6
Thhalv10006352m.g Eutrema salsugineum HOM05D006941 ORTHO05D008361 2.1e-27 125.2 69 88.4
TWI53G0190 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 2.1e-27 125.2 74 79.7
CiPaw.02G087700 Carya illinoinensis HOM05D006941 ORTHO05D008361 4.8e-27 124.0 72 80.6
Atru.chr4.2738 Acer truncatum HOM05D006941 ORTHO05D008361 6.2e-27 123.6 72 81.9
FAN22G2172 Fragaria x ananassa HOM05D006941 ORTHO05D008361 6.2e-27 123.6 74 81.1
RcHm_v2.0_Chr4g0420661 Rosa chinensis HOM05D006941 ORTHO05D008361 6.2e-27 123.6 72 81.9
Sp5g00970 Schrenkiella parvula HOM05D006941 ORTHO05D008361 6.2e-27 123.6 69 87.0
QL06p006942 Quercus lobata HOM05D006941 ORTHO05D008361 1.1e-26 122.9 71 78.9
TWI09G0325 Tripterygium wilfordii HOM05D006941 ORTHO05D008361 1.1e-26 122.9 74 78.4
vmacro15274 Vaccinium macrocarpon HOM05D006941 ORTHO05D008361 1.1e-26 122.9 75 81.3
FAN17G2868 Fragaria x ananassa HOM05D006941 ORTHO05D008361 1.4e-26 122.5 72 80.6
HanXRQChr05g0154771 Helianthus annuus HOM05D006941 ORTHO05D008361 1.8e-26 122.1 72 84.7
C08p37290 Brassica napus HOM05D006941 ORTHO05D008361 2.4e-26 121.7 69 84.1
BolC8t51307H Brassica oleracea HOM05D006941 ORTHO05D008361 2.4e-26 121.7 69 84.1
Actinidia32379 Actinidia chinensis HOM05D006941 ORTHO05D008361 3.1e-26 121.3 69 82.6
BcaC07g42761 Brassica carinata HOM05D006941 ORTHO05D008361 3.1e-26 121.3 69 84.1
SalBow1G8344 Salvia bowleyana HOM05D006941 ORTHO05D008361 3.1e-26 121.3 73 79.5
EL10As5g23584 Beta vulgaris HOM05D006941 ORTHO05D008361 5.3e-26 120.6 71 80.3
Potri.005G071700 Populus trichocarpa HOM05D006941 ORTHO05D008361 5.3e-26 120.6 72 77.8
AL5G45260 Arabidopsis lyrata HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 80.6
Lj5g0014316 Lotus japonicus HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 80.6
Phvul.007G158300 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 79.2
Solyc01g067820.3 Solanum lycopersicum HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 79.2
PGSC0003DMG400022846 Solanum tuberosum HOM05D006941 ORTHO05D008361 6.9e-26 120.2 72 79.2
ECA233G1626 Erigeron canadensis HOM05D006941 ORTHO05D008361 9.0e-26 119.8 72 81.9
Os11g0107450 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 9.0e-26 119.8 68 82.4
Phvul.010G109000 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.0e-26 119.8 74 75.7
Phvul.L002281 Phaseolus vulgaris HOM05D006941 ORTHO05D008361 9.0e-26 119.8 74 75.7
AT3G62450 Arabidopsis thaliana HOM05D006941 ORTHO05D008361 2.0e-25 118.6 72 79.2
Lalb_Chr22g0358511 Lupinus albus HOM05D006941 ORTHO05D008361 2.0e-25 118.6 72 80.6
Ca_09608_v3 Cicer arietinum L. HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 76.4
Glyma.13G132200 Glycine max HOM05D006941 ORTHO05D008361 2.6e-25 118.2 72 77.8
Aa31LG10G16360 Aethionema arabicum HOM05D006941 ORTHO05D008361 3.4e-25 117.9 67 83.6
Nitab4.5_0001624g0050 Nicotiana tabacum HOM05D006941 ORTHO05D008361 3.4e-25 117.9 72 77.8
Sopen01g029770 Solanum pennellii HOM05D006941 ORTHO05D008361 3.4e-25 117.9 72 76.4
A09p54410 Brassica napus HOM05D006941 ORTHO05D008361 4.4e-25 117.5 69 79.7
BraA09t40854Z Brassica rapa HOM05D006941 ORTHO05D008361 4.4e-25 117.5 69 79.7
Migut.G00223 Erythranthe guttata HOM05D006941 ORTHO05D008361 4.4e-25 117.5 71 77.5
Glyma.10G044600 Glycine max HOM05D006941 ORTHO05D008361 4.4e-25 117.5 72 76.4
CSS0029112 Camellia sinensis var. sinensis HOM05D006941 ORTHO05D008361 7.6e-25 116.7 72 75.0
DCAR_030574 Daucus carota HOM05D006941 ORTHO05D008361 7.6e-25 116.7 72 76.4
THA.LOC104820449 Tarenaya hassleriana HOM05D006941 ORTHO05D008361 1.3e-24 115.9 74 75.7
CAN.G1327.4 Capsicum annuum HOM05D006941 ORTHO05D008361 1.7e-24 115.5 72 76.4
Psat6g067840 Pisum sativum HOM05D006941 ORTHO05D008361 1.7e-24 115.5 72 73.6
Os12g0106550 Oryza sativa ssp. japonica HOM05D006941 ORTHO05D008361 2.2e-24 115.2 69 78.3
Peaxi162Scf01067g00024 Petunia axillaris HOM05D006941 ORTHO05D008361 2.9e-24 114.8 71 74.6
Lalb_Chr14g0364951 Lupinus albus HOM05D006941 ORTHO05D008361 3.8e-24 114.4 72 76.4
unitig_22.g6332 Utricularia gibba HOM05D006941 ORTHO05D008361 4.9e-24 114.0 67 79.1
Sabra07G0080600 Salix brachista HOM05D006941 ORTHO05D008361 8.4e-24 113.2 82 68.3
Sed0004518 Sechium edule HOM05D006941 ORTHO05D008361 8.4e-24 113.2 67 79.1
Medtr1g068580 Medicago truncatula HOM05D006941 ORTHO05D008361 2.4e-23 111.7 66 78.8
SGA_v2.0_scaffold57G20266 Striga asiatica HOM05D006941 ORTHO05D008361 4.2e-23 110.9 101 62.4
BcaB02g07336 Brassica carinata HOM05D006941 ORTHO05D008361 7.1e-23 110.2 59 88.1
Hund22020 Selenicereus undatus HOM05D006941 ORTHO05D008361 1.2e-22 109.4 69 78.3
Zm00001eb163280 Zea mays HOM05D006941 ORTHO05D008361 1.2e-22 109.4 69 75.4
Medtr2g005070 Medicago truncatula HOM05D006941 ORTHO05D008361 2.7e-22 108.2 65 76.9
Zm00001eb094170 Zea mays HOM05D006941 ORTHO05D008361 3.5e-22 107.8 72 72.2
PSO302G0016 Papaver somniferum HOM05D006941 ORTHO05D008361 4.6e-22 107.5 69 72.5
arahy.Tifrunner.gnm1.ann1.UB09PE Arachis hypogaea HOM05D006941 ORTHO05D008361 1.7e-21 105.5 71 74.6
arahy.Tifrunner.gnm1.ann1.DDI179 Arachis hypogaea HOM05D006941 ORTHO05D008361 2.3e-21 105.1 85 64.7
Lj4g0022805 Lotus japonicus HOM05D006941 ORTHO05D008361 3.3e-20 101.3 72 75.0
ClCG06G005480 Citrullus lanatus HOM05D006941 ORTHO05D008361 5.6e-20 100.5 79 65.8
SHI00325 Sapria himalayana HOM05D006941 ORTHO05D008361 1.6e-19 99.0 72 65.3
Haze_01039 Corylus avellana HOM05D006941 ORTHO05D008361 4.8e-19 97.4 72 70.8
HanXRQChr15g0466771 Helianthus annuus HOM05D006941 ORTHO05D008361 9.0e-18 93.2 137 43.8
SEGI_10041 Sequoiadendron giganteum HOM05D006941 ORTHO05D008361 1.5e-17 92.4 65 64.6
VMungo0464G0431 Vigna mungo HOM05D006941 ORTHO05D008361 1.5e-17 92.4 131 43.5
Cfa015511 Carpinus fangiana HOM05D006941 ORTHO05D008361 5.8e-17 90.5 70 67.1
MD16G1176900 Malus domestica HOM05D006941 ORTHO05D008361 9.9e-17 89.7 52 84.6
CDE02G1545 Ceratophyllum demersum HOM05D006941 ORTHO05D008361 2.9e-16 88.2 67 61.2
RcHm_v2.0_Chr1g0363231 Rosa chinensis HOM05D006941 ORTHO05D008361 8.4e-16 86.7 50 82.0
PGSC0003DMG400029912 Solanum tuberosum HOM05D006941 ORTHO05D008361 8.4e-16 86.7 51 78.4
Sabra05G0058700 Salix brachista HOM05D006941 ORTHO05D008361 3.0e-13 78.2 166 33.1
vmacro16859 Vaccinium macrocarpon HOM05D000537 ORTHO05D000415 3.0e-13 78.2 39 89.7
BcaC07g40728 Brassica carinata HOM05D006941 ORTHO05D008361 8.7e-13 76.6 69 59.4
COL.COLO4_13955 Corchorus olitorius HOM05D006941 ORTHO05D008361 1.1e-12 76.3 41 90.2
Eucgr.H03709 Eucalyptus grandis HOM05D006941 ORTHO05D008361 3.3e-12 74.7 42 83.3
Lsat_1_v5_gn_2_28060 Lactuca sativa HOM05D006941 ORTHO05D008361 3.3e-12 74.7 60 65.0
SGA_v2.0_scaffold114G31931 Striga asiatica HOM05D006941 ORTHO05D008361 4.3e-12 74.3 52 65.4
Ciclev10006724m.g Citrus clementina HOM05D006941 ORTHO05D008361 9.6e-12 73.2 42 81.0
Sc19g0004830 Simmondsia chinensis HOM05D006941 ORTHO05D008361 9.6e-12 73.2 42 81.0
VMungo0720G2266 Vigna mungo HOM05D006941 ORTHO05D008361 4.8e-11 70.9 68 58.8
Atru.chr2.2418 Acer truncatum HOM05D006941 ORTHO05D008361 2.4e-10 68.6 42 78.6
MSTRG.24772 Avicennia marina HOM05D006941 ORTHO05D008361 2.4e-10 68.6 42 73.8
Eucgr.H03675 Eucalyptus grandis HOM05D006941 ORTHO05D008361 4.0e-10 67.8 39 76.9
Oeu048197.1 Olea europaea HOM05D010625 ORTHO05D008361 9.0e-10 66.6 41 78.0
Dinv16400 Davidia involucrata HOM05D006941 ORTHO05D008361 4.5e-09 64.3 35 80.0
Medtr2g048470 Medicago truncatula HOM05D006941 ORTHO05D008361 1.0e-08 63.2 37 81.1
Cpa.g.sc16.95 Carica papaya HOM05D006941 ORTHO05D008361 3.8e-08 61.2 32 84.4
Eucgr.H03674 Eucalyptus grandis HOM05D025724 ORTHO05D008361 1.1e-07 59.7 36 77.8
AagrBONN_evm.TU.Sc2ySwM_344.628 Anthoceros agrestis HOM05D006941 ORTHO05D008361 3.2e-07 58.2 40 62.5
Pp3c4_20400 Physcomitrium patens HOM05D006941 ORTHO05D008361 4.6e-06 54.3 66 43.9
Mapoly0142s0032 Marchantia polymorpha HOM05D006941 ORTHO05D008361 6.0e-06 53.9 52 53.8
HanXRQChr10g0285751 Helianthus annuus HOM05D006941 ORTHO05D008361 7.9e-06 53.5 31 77.4


User provided reference genes

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