Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A02G013402 Gossypium hirsutum HOM05D002704 ORTHO05D002891 1.1e-99 366.7 194 100.0
Gohir.D02G014400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 3.1e-94 348.6 196 95.9
Gorai.005G017900 Gossypium raimondii HOM05D002704 ORTHO05D002891 5.9e-93 344.4 195 95.4
Duzib151G0761 Durio zibethinus HOM05D002704 ORTHO05D002891 1.6e-66 256.5 201 69.2
Duzib268G0568 Durio zibethinus HOM05D002704 ORTHO05D002891 5.4e-62 241.5 201 66.2
Duzib268G0864 Durio zibethinus HOM05D002704 ORTHO05D002891 2.0e-61 239.6 201 65.7
COL.COLO4_24351 Corchorus olitorius HOM05D002704 ORTHO05D002891 2.1e-58 229.6 204 65.2
Thecc.04G181700 Theobroma cacao HOM05D002704 ORTHO05D002891 1.7e-55 219.9 201 65.7
Potri.014G150900 Populus trichocarpa HOM05D002704 ORTHO05D002891 1.5e-48 196.8 203 57.1
GSVIVG01013547001 Vitis vinifera HOM05D002704 ORTHO05D002891 3.7e-47 192.2 205 59.0
QL10p046538 Quercus lobata HOM05D002704 ORTHO05D002891 2.4e-46 189.5 200 52.5
Sabra02G0176600 Salix brachista HOM05D002704 ORTHO05D002891 1.2e-45 187.2 203 55.7
Potri.002G231400 Populus trichocarpa HOM05D002704 ORTHO05D002891 2.7e-45 186.0 203 54.7
CiPaw.02G057300 Carya illinoinensis HOM05D002704 ORTHO05D002891 5.9e-45 184.9 201 52.7
CiPaw.01G106200 Carya illinoinensis HOM05D002704 ORTHO05D002891 1.5e-43 180.3 206 51.9
Atru.chr3.1657 Acer truncatum HOM05D002704 ORTHO05D002891 7.3e-43 177.9 213 55.9
Manes.11G114400 Manihot esculenta HOM05D002704 ORTHO05D002891 4.7e-42 175.3 213 52.6
Prupe.1G182000 Prunus persica HOM05D002704 ORTHO05D002891 1.0e-41 174.1 185 54.1
Ciclev10023373m.g Citrus clementina HOM05D002704 ORTHO05D002891 9.8e-40 167.5 206 56.3
PGSC0003DMG400021617 Solanum tuberosum HOM05D002704 ORTHO05D002891 2.2e-39 166.4 197 49.7
Hma1.2p1_0429F.1_g151125 Hydrangea macrophylla HOM05D002704 ORTHO05D002891 6.4e-39 164.9 198 52.5
Cpa.g.c36743 Carica papaya HOM05D002704 ORTHO05D002891 3.2e-38 162.5 193 49.7
Dinv44226 Davidia involucrata HOM05D002704 ORTHO05D002891 7.8e-37 157.9 172 55.2
Sopen09g036400 Solanum pennellii HOM05D002704 ORTHO05D002891 1.7e-36 156.8 144 56.9
Manes.04G050300 Manihot esculenta HOM05D002704 ORTHO05D002891 3.0e-36 156.0 211 47.9
Sabra15G0066300 Salix brachista HOM05D002704 ORTHO05D002891 1.1e-35 154.1 222 44.6
CSS0004996 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 1.5e-35 153.7 166 57.8
PSO357G0625 Papaver somniferum HOM05D002704 ORTHO05D002891 1.5e-35 153.7 200 49.0
Aqoxy2G04081 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 2.5e-35 152.9 159 52.2
Aqoxy6G02333 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 2.5e-35 152.9 159 52.2
CSS0030073 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 7.3e-35 151.4 166 57.2
TAR633G1006 Trochodendron aralioides HOM05D002704 ORTHO05D002891 9.5e-35 151.0 201 50.2
Sed0000491 Sechium edule HOM05D002704 ORTHO05D002891 3.6e-34 149.1 209 46.4
PSO170G1174 Papaver somniferum HOM05D002704 ORTHO05D002891 5.2e-33 145.2 200 49.5
Peaxi162Scf00286g00244 Petunia axillaris HOM05D002704 ORTHO05D002891 3.4e-32 142.5 172 47.7
MSTRG.24593 Avicennia marina HOM05D002704 ORTHO05D002891 9.8e-32 141.0 186 46.2
Oeu007224.1 Olea europaea HOM05D002704 ORTHO05D002891 8.3e-31 137.9 122 57.4
Oeu007226.1 Olea europaea HOM05D002704 ORTHO05D002891 8.3e-31 137.9 122 57.4
Solyc09g098490.4 Solanum lycopersicum HOM05D001811 ORTHO05D001738 8.3e-31 137.9 170 46.5
Actinidia17222 Actinidia chinensis HOM05D002704 ORTHO05D002891 1.4e-30 137.1 175 50.9
Actinidia35890 Actinidia chinensis HOM05D002704 ORTHO05D002891 5.4e-30 135.2 176 50.6
ClCG08G004030 Citrullus lanatus HOM05D002704 ORTHO05D002891 1.6e-29 133.7 202 41.6
Oeu006703.1 Olea europaea HOM05D002704 ORTHO05D002891 2.7e-29 132.9 131 54.2
Sed0010272 Sechium edule HOM05D002704 ORTHO05D002891 3.5e-29 132.5 197 44.7
CANSAT78G1882 Cannabis sativa HOM05D002704 ORTHO05D002891 3.0e-28 129.4 227 46.3
SalBow6G4869 Salvia bowleyana HOM05D002704 ORTHO05D002891 1.1e-27 127.5 126 58.7
CsaV3_6G003190 Cucumis sativus L. HOM05D002704 ORTHO05D002891 3.3e-27 125.9 221 45.7
MBI08_g28697_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 1.1e-25 120.9 198 42.9
HPP92_023705 Vanilla planifolia HOM05D002704 ORTHO05D002891 1.8e-25 120.2 164 45.1
Dinv22667 Davidia involucrata HOM05D002704 ORTHO05D002891 3.1e-25 119.4 111 55.9
Zm00001eb133700 Zea mays HOM05D002704 ORTHO05D002891 3.1e-25 119.4 175 41.7
Zm00001eb199020 Zea mays HOM05D002704 ORTHO05D002891 1.5e-24 117.1 151 45.7
Os11g0294400 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 2.0e-24 116.7 158 44.3
Zm00001eb411630 Zea mays HOM05D002704 ORTHO05D002891 2.0e-24 116.7 199 38.2
Peaxi162Scf00378g00084 Petunia axillaris HOM05D002704 ORTHO05D002891 2.6e-24 116.3 177 46.9
CDE08G0150 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 4.1e-22 109.0 160 40.6
MBI11_g35640_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 4.6e-21 105.5 138 44.9
SEGI_04164 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 1.3e-20 104.0 137 43.8
SEGI_20858 Sequoiadendron giganteum HOM05D002704 ORTHO05D002891 9.6e-19 97.8 153 41.2
ATR0782G003 Amborella trichopoda HOM05D002704 ORTHO05D002891 2.1e-18 96.7 139 37.4
FvH4_5g37370 Fragaria vesca HOM05D002704 ORTHO05D002891 1.3e-15 87.4 140 35.7
FAN08G2281 Fragaria x ananassa HOM05D002704 ORTHO05D002891 1.3e-15 87.4 140 35.7
RcHm_v2.0_Chr4g0408971 Rosa chinensis HOM05D002704 ORTHO05D002891 1.7e-15 87.0 108 62.0
FAN04G1068 Fragaria x ananassa HOM05D002704 ORTHO05D002891 2.2e-15 86.7 128 36.7
FAN13G2774 Fragaria x ananassa HOM05D002704 ORTHO05D002891 2.2e-15 86.7 140 35.0
Manes.02G153000 Manihot esculenta HOM05D002704 ORTHO05D002891 2.2e-15 86.7 185 30.8
TWI12G0499 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 2.2e-15 86.7 139 38.1
CDE10G0994 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 2.9e-15 86.3 122 36.9
FAN18G1803 Fragaria x ananassa HOM05D002704 ORTHO05D002891 2.9e-15 86.3 140 35.7
TWI56G1046 Tripterygium wilfordii HOM05D002704 ORTHO05D002891 2.9e-15 86.3 126 38.9
Aqoxy6G00791 Aquilegia oxysepala HOM05D002704 ORTHO05D002891 3.8e-15 85.9 168 33.3
Sed0024849 Sechium edule HOM05D002704 ORTHO05D002891 4.9e-15 85.5 149 35.6
Ciclev10002416m.g Citrus clementina HOM05D002704 ORTHO05D002891 1.1e-14 84.3 165 32.7
CDE10G0971 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 1.4e-14 84.0 122 36.1
MD08G1182400 Malus domestica HOM05D002704 ORTHO05D002891 1.4e-14 84.0 204 30.9
ClCG08G011070 Citrullus lanatus HOM05D002704 ORTHO05D002891 1.9e-14 83.6 144 39.6
RcHm_v2.0_Chr7g0239041 Rosa chinensis HOM05D002704 ORTHO05D002891 1.9e-14 83.6 126 37.3
CiPaw.08G044800 Carya illinoinensis HOM05D002704 ORTHO05D002891 2.4e-14 83.2 205 30.7
TAR628G0302 Trochodendron aralioides HOM05D002704 ORTHO05D002891 2.4e-14 83.2 161 33.5
MELO3C003450.2 Cucumis melo HOM05D002704 ORTHO05D002891 3.2e-14 82.8 160 33.8
MBI05_g19349_MAGBIO Magnolia biondii HOM05D002704 ORTHO05D002891 5.4e-14 82.0 185 31.4
Sed0020547 Sechium edule HOM05D002704 ORTHO05D002891 5.4e-14 82.0 140 33.6
Lj4C103T16 Lonicera japonica HOM05D002704 ORTHO05D002891 9.3e-14 81.3 162 34.0
Actinidia10319 Actinidia chinensis HOM05D002704 ORTHO05D002891 1.2e-13 80.9 155 34.2
CsaV3_3G048710 Cucumis sativus L. HOM05D002704 ORTHO05D002891 2.1e-13 80.1 162 33.3
Ah.05g170030 Amaranthus hybridus HOM05D002704 ORTHO05D002891 2.7e-13 79.7 182 34.6
CsaV3_2G029650 Cucumis sativus L. HOM05D002704 ORTHO05D002891 2.7e-13 79.7 166 30.7
Thecc.08G107400 Theobroma cacao HOM05D002704 ORTHO05D002891 2.7e-13 79.7 208 29.8
HPP92_011170 Vanilla planifolia HOM05D002704 ORTHO05D002891 2.7e-13 79.7 130 33.8
HPP92_019307 Vanilla planifolia HOM05D002704 ORTHO05D002891 2.7e-13 79.7 141 31.9
Os12g0233100 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 3.5e-13 79.3 137 43.8
MELO3C011023.2 Cucumis melo HOM05D002704 ORTHO05D002891 4.6e-13 79.0 150 31.3
Dinv44770 Davidia involucrata HOM05D002704 ORTHO05D002891 4.6e-13 79.0 211 30.8
Duzib093G0662 Durio zibethinus HOM05D002704 ORTHO05D002891 4.6e-13 79.0 194 29.4
MD15G1368100 Malus domestica HOM05D002704 ORTHO05D002891 4.6e-13 79.0 156 33.3
Nn5g30117 Nelumbo nucifera HOM05D002704 ORTHO05D002891 4.6e-13 79.0 165 32.1
QL12p036715 Quercus lobata HOM05D002704 ORTHO05D002891 6.0e-13 78.6 206 31.1
TAR381G1126 Trochodendron aralioides HOM05D002704 ORTHO05D002891 6.0e-13 78.6 201 30.3
Atru.chr13.1197 Acer truncatum HOM05D002704 ORTHO05D002891 7.8e-13 78.2 201 29.9
ClCG11G015290 Citrullus lanatus HOM05D002704 ORTHO05D002891 7.8e-13 78.2 172 33.7
Lsat_1_v5_gn_9_41620 Lactuca sativa HOM05D002704 ORTHO05D002891 7.8e-13 78.2 153 31.4
Solyc04g074080.3 Solanum lycopersicum HOM05D002704 ORTHO05D002891 7.8e-13 78.2 157 31.8
COL.COLO4_16406 Corchorus olitorius HOM05D002704 ORTHO05D002891 1.0e-12 77.8 224 29.9
Gorai.009G237500 Gossypium raimondii HOM05D002704 ORTHO05D002891 1.0e-12 77.8 212 31.1
Manes.18G067800 Manihot esculenta HOM05D002704 ORTHO05D002891 1.0e-12 77.8 171 31.6
PGSC0003DMG400006402 Solanum tuberosum HOM05D002704 ORTHO05D002891 1.0e-12 77.8 172 32.0
Sed0023198 Sechium edule HOM05D002704 ORTHO05D002891 1.3e-12 77.4 131 33.6
GSVIVG01009025001 Vitis vinifera HOM05D002704 ORTHO05D002891 1.7e-12 77.0 194 29.4
Gohir.A05G226700 Gossypium hirsutum HOM05D002704 ORTHO05D002891 2.3e-12 76.6 212 29.7
CSS0027836 Camellia sinensis var. sinensis HOM05D002704 ORTHO05D002891 3.0e-12 76.3 197 29.9
Hund16912 Selenicereus undatus HOM05D002704 ORTHO05D002891 3.0e-12 76.3 174 31.0
SGA_v2.0_scaffold31G12567 Striga asiatica HOM05D002704 ORTHO05D002891 3.0e-12 76.3 65 56.9
Gohir.D05G229400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 3.9e-12 75.9 212 30.7
Potri.005G165300 Populus trichocarpa HOM05D002704 ORTHO05D002891 3.9e-12 75.9 178 32.6
Cpa.g.sc36.127 Carica papaya HOM05D002704 ORTHO05D002891 5.1e-12 75.5 181 29.8
Duzib116G0617 Durio zibethinus HOM05D002704 ORTHO05D002891 5.1e-12 75.5 191 31.4
Prupe.1G516300 Prunus persica HOM05D002704 ORTHO05D002891 5.1e-12 75.5 218 28.9
Gorai.005G094000 Gossypium raimondii HOM05D002704 ORTHO05D002891 6.6e-12 75.1 156 34.6
Peaxi162Scf00041g00165 Petunia axillaris HOM05D002704 ORTHO05D002891 6.6e-12 75.1 163 31.3
Gohir.A02G076100 Gossypium hirsutum HOM05D002704 ORTHO05D002891 8.7e-12 74.7 156 35.3
Nitab4.5_0005777g0010 Nicotiana tabacum HOM05D002704 ORTHO05D002891 8.7e-12 74.7 181 30.4
EL10Ac1g01225 Beta vulgaris HOM05D002704 ORTHO05D002891 1.1e-11 74.3 202 28.7
Hund26960 Selenicereus undatus HOM05D002704 ORTHO05D002891 1.5e-11 73.9 152 30.3
Duzib041G0800 Durio zibethinus HOM05D002704 ORTHO05D002891 1.9e-11 73.6 191 30.4
Sabra02G0075700 Salix brachista HOM05D002704 ORTHO05D002891 1.9e-11 73.6 176 29.5
Gohir.D02G083400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 2.5e-11 73.2 150 34.0
CAN.G101.15 Capsicum annuum HOM05D002704 ORTHO05D002891 3.3e-11 72.8 167 30.5
HanXRQChr15g0491861 Helianthus annuus HOM05D002704 ORTHO05D002891 3.3e-11 72.8 157 38.9
CDE04G0076 Ceratophyllum demersum HOM05D002704 ORTHO05D002891 4.3e-11 72.4 142 33.1
Psat2g072240 Pisum sativum HOM05D002704 ORTHO05D002891 4.3e-11 72.4 136 38.2
Sc23g0000210 Simmondsia chinensis HOM05D002704 ORTHO05D002891 4.3e-11 72.4 166 28.9
Actinidia27183 Actinidia chinensis HOM05D002704 ORTHO05D002891 5.6e-11 72.0 137 31.4
DCAR_029361 Daucus carota HOM05D002704 ORTHO05D002891 5.6e-11 72.0 137 33.6
Dinv14325 Davidia involucrata HOM05D002704 ORTHO05D002891 5.6e-11 72.0 214 27.6
Nitab4.5_0000421g0060 Nicotiana tabacum HOM05D002704 ORTHO05D002891 7.3e-11 71.6 160 31.9
AUR62027750 Chenopodium quinoa HOM05D002704 ORTHO05D002891 9.6e-11 71.2 155 37.4
Nitab4.5_0000232g0230 Nicotiana tabacum HOM05D002704 ORTHO05D002891 9.6e-11 71.2 152 30.3
Ca_05274_v3 Cicer arietinum L. HOM05D002704 ORTHO05D002891 1.3e-10 70.9 208 29.8
Zm00001eb006930 Zea mays HOM05D002704 ORTHO05D002891 1.3e-10 70.9 139 28.8
AUR62038516 Chenopodium quinoa HOM05D002704 ORTHO05D002891 1.6e-10 70.5 153 28.8
Oeu012923.1 Olea europaea HOM05D002704 ORTHO05D002891 2.1e-10 70.1 159 30.8
TAR625G1386 Trochodendron aralioides HOM05D002704 ORTHO05D002891 3.6e-10 69.3 178 28.7
PSO447G0371 Papaver somniferum HOM05D002704 ORTHO05D002891 8.1e-10 68.2 141 29.8
PSO210G1059 Papaver somniferum HOM05D002704 ORTHO05D002891 1.1e-09 67.8 139 30.2
TPR.G34534 Trifolium pratense HOM05D002704 ORTHO05D002891 1.8e-09 67.0 215 29.3
MSTRG.24460 Avicennia marina HOM05D002704 ORTHO05D002891 4.0e-09 65.9 160 30.0
Hma1.2p1_0237F.1_g099460 Hydrangea macrophylla HOM05D002704 ORTHO05D002891 4.0e-09 65.9 199 26.6
Medtr5g063720 Medicago truncatula HOM05D002704 ORTHO05D002891 5.3e-09 65.5 205 35.6
Zm00001eb401340 Zea mays HOM05D002704 ORTHO05D002891 5.3e-09 65.5 151 37.1
Haze_22261 Corylus avellana HOM05D002704 ORTHO05D002891 6.9e-09 65.1 204 30.9
Eucgr.B00020 Eucalyptus grandis HOM05D002704 ORTHO05D002891 9.0e-09 64.7 154 32.5
Potri.002G096100 Populus trichocarpa HOM05D002704 ORTHO05D002891 1.2e-08 64.3 200 25.5
MSTRG.22153 Avicennia marina HOM05D002704 ORTHO05D002891 2.6e-08 63.2 163 30.1
Cc10_g07250 Coffea canephora HOM05D002704 ORTHO05D002891 3.4e-08 62.8 176 25.6
HPP92_011168 Vanilla planifolia HOM05D002704 ORTHO05D002891 3.4e-08 62.8 130 31.5
Eucgr.F02409 Eucalyptus grandis HOM05D002704 ORTHO05D002891 9.9e-08 61.2 155 32.3
CANSAT25G0913 Cannabis sativa HOM05D002704 ORTHO05D002891 1.3e-07 60.8 184 23.4
Psat5g138480 Pisum sativum HOM05D002704 ORTHO05D002891 1.3e-07 60.8 212 27.8
Aqoxy2G01020 Aquilegia oxysepala HOM05D001667 ORTHO05D001508 1.7e-07 60.5 128 31.2
Nn1g05351 Nelumbo nucifera HOM05D002704 ORTHO05D002891 2.9e-07 59.7 165 26.7
Oeu046295.1 Olea europaea HOM05D002704 ORTHO05D002891 3.8e-07 59.3 133 29.3
Rhsim06G0082500 Rhododendron simsii HOM05D002704 ORTHO05D002891 6.4e-07 58.5 163 27.0
MBI01_g34424_MAGBIO Magnolia biondii HOM05D001667 ORTHO05D001508 1.1e-06 57.8 128 32.8
VMungo1309G0496 Vigna mungo HOM05D002704 ORTHO05D002891 1.1e-06 57.8 216 28.7
Os03g0191200 Oryza sativa ssp. japonica HOM05D002704 ORTHO05D002891 1.4e-06 57.4 163 25.2
MELO3C030199.2 Cucumis melo HOM05D002704 ORTHO05D002891 2.4e-06 56.6 82 46.3
Medtr3g074450 Medicago truncatula HOM05D002704 ORTHO05D002891 2.4e-06 56.6 188 29.3
TAR633G2309 Trochodendron aralioides HOM05D001667 ORTHO05D001508 2.4e-06 56.6 126 31.0
TPR.G32999 Trifolium pratense HOM05D002704 ORTHO05D002891 4.2e-06 55.8 189 26.5
Mapoly0029s0076 Marchantia polymorpha HOM05D013579 ORTHO05D015305 5.4e-06 55.5 65 43.1
THA.LOC104809714 Tarenaya hassleriana HOM05D002704 ORTHO05D002891 5.4e-06 55.5 155 32.9
Nn6g34775 Nelumbo nucifera HOM05D001667 ORTHO05D001508 7.1e-06 55.1 127 30.7
PGR004G2379 Punica granatum HOM05D001667 ORTHO05D001508 7.1e-06 55.1 136 28.7
Oeu019428.1 Olea europaea HOM05D003968 ORTHO05D004077 9.3e-06 54.7 115 30.4


User provided reference genes

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