Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.A01G112900 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.8e-45 184.5 95 100.0
Gohir.D01G101000 Gossypium hirsutum HOM05D007073 ORTHO05D008855 3.3e-41 171.4 91 96.7
Duzib093G1738 Durio zibethinus HOM05D007073 ORTHO05D008855 5.0e-37 157.5 89 87.6
Thecc.08G038900 Theobroma cacao HOM05D007073 ORTHO05D008855 8.5e-37 156.8 95 83.2
COL.COLO4_26179 Corchorus olitorius HOM05D007073 ORTHO05D008855 4.7e-35 151.0 89 85.4
CSS0049768 Camellia sinensis var. sinensis HOM05D007073 ORTHO05D008855 1.7e-32 142.5 89 82.0
Atru.chr13.338 Acer truncatum HOM05D007073 ORTHO05D008855 2.8e-32 141.7 89 80.9
Dinv31819 Davidia involucrata HOM05D007073 ORTHO05D008855 3.7e-32 141.4 89 80.9
Prupe.1G369500 Prunus persica HOM05D007073 ORTHO05D008855 8.2e-32 140.2 89 77.5
FAN13G2867 Fragaria x ananassa HOM05D007073 ORTHO05D008855 4.1e-31 137.9 94 74.5
RcHm_v2.0_Chr6g0272121 Rosa chinensis HOM05D007073 ORTHO05D008855 4.1e-31 137.9 89 78.7
Cfa013916 Carpinus fangiana HOM05D007073 ORTHO05D008855 7.0e-31 137.1 89 76.4
Haze_22602 Corylus avellana HOM05D000624 ORTHO05D000495 7.0e-31 137.1 89 76.4
FvH4_5g30190 Fragaria vesca HOM05D007073 ORTHO05D008855 1.2e-30 136.3 89 77.5
FAN18G2174 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.2e-30 136.3 89 77.5
GSVIVG01009840001 Vitis vinifera HOM05D007073 ORTHO05D008855 1.2e-30 136.3 89 77.5
HanXRQChr02g0044001 Helianthus annuus HOM05D007073 ORTHO05D008855 1.6e-30 136.0 89 77.5
Lsat_1_v5_gn_1_16141 Lactuca sativa HOM05D007073 ORTHO05D008855 1.6e-30 136.0 89 75.3
Rhsim06G0025500 Rhododendron simsii HOM05D000624 ORTHO05D000495 2.0e-30 135.6 89 79.8
RhsimUnG0148500 Rhododendron simsii HOM05D007073 ORTHO05D008855 2.0e-30 135.6 89 79.8
RcHm_v2.0_Chr6g0302381 Rosa chinensis HOM05D007073 ORTHO05D008855 2.0e-30 135.6 89 77.5
ECA247G1834 Erigeron canadensis HOM05D007073 ORTHO05D008855 4.5e-30 134.4 84 78.6
TAR628G0116 Trochodendron aralioides HOM05D007073 ORTHO05D008855 4.5e-30 134.4 89 77.5
vmacro21707 Vaccinium macrocarpon HOM05D007073 ORTHO05D008855 4.5e-30 134.4 89 79.8
Ciclev10002853m.g Citrus clementina HOM05D007073 ORTHO05D008855 5.9e-30 134.0 90 74.4
QL02p010904 Quercus lobata HOM05D007073 ORTHO05D008855 1.0e-29 133.3 89 75.3
CANSAT25G0010 Cannabis sativa HOM05D007073 ORTHO05D008855 1.3e-29 132.9 82 79.3
PGR031G0624 Punica granatum HOM05D007073 ORTHO05D008855 1.3e-29 132.9 89 76.4
Sed0011824 Sechium edule HOM05D007073 ORTHO05D008855 1.3e-29 132.9 89 78.7
ClCG08G014440 Citrullus lanatus HOM05D007073 ORTHO05D008855 2.2e-29 132.1 90 76.7
Glyma.08G113800 Glycine max HOM05D007073 ORTHO05D008855 2.2e-29 132.1 89 74.2
Psat7g072280 Pisum sativum HOM05D007073 ORTHO05D008855 2.9e-29 131.7 89 77.5
CiPaw.07G153100 Carya illinoinensis HOM05D007073 ORTHO05D008855 3.8e-29 131.3 89 74.2
Hma1.2p1_0773F.1_g216240 Hydrangea macrophylla HOM05D007073 ORTHO05D008855 3.8e-29 131.3 87 78.2
Lj4g0003370 Lotus japonicus HOM05D007073 ORTHO05D008855 6.5e-29 130.6 83 78.3
PSO675G5408 Papaver somniferum HOM05D007073 ORTHO05D008855 6.5e-29 130.6 89 73.0
Ca_17949_v3 Cicer arietinum L. HOM05D007073 ORTHO05D008855 8.5e-29 130.2 89 74.2
VMungo0251G2135 Vigna mungo HOM05D007073 ORTHO05D008855 8.5e-29 130.2 87 73.6
PSO541G6379 Papaver somniferum HOM05D007073 ORTHO05D008855 1.1e-28 129.8 89 73.0
Sabra05G0182000 Salix brachista HOM05D007073 ORTHO05D008855 1.1e-28 129.8 87 74.7
Potri.005G235800 Populus trichocarpa HOM05D007073 ORTHO05D008855 1.5e-28 129.4 87 75.9
AUR62014408 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.9e-28 129.0 85 74.1
TWI56G0686 Tripterygium wilfordii HOM05D007073 ORTHO05D008855 1.9e-28 129.0 89 73.0
Cc04_g14740 Coffea canephora HOM05D007073 ORTHO05D008855 2.5e-28 128.6 83 74.7
Eucgr.H01040 Eucalyptus grandis HOM05D007073 ORTHO05D008855 2.5e-28 128.6 89 73.0
Eucgr.L01253 Eucalyptus grandis HOM05D007073 ORTHO05D008855 3.2e-28 128.3 89 71.9
Glyma.05G155900 Glycine max HOM05D007073 ORTHO05D008855 7.2e-28 127.1 89 71.9
Nn5g29254 Nelumbo nucifera HOM05D007073 ORTHO05D008855 9.4e-28 126.7 89 73.0
CsaV3_2G029360 Cucumis sativus L. HOM05D007073 ORTHO05D008855 1.6e-27 125.9 89 75.3
Migut.C00802 Erythranthe guttata HOM05D007073 ORTHO05D008855 2.1e-27 125.6 89 71.9
Os03g0127000 Oryza sativa ssp. japonica HOM05D007073 ORTHO05D008855 2.1e-27 125.6 85 70.6
TPR.G24371 Trifolium pratense HOM05D007073 ORTHO05D008855 2.1e-27 125.6 84 76.2
Oeu054729.1 Olea europaea HOM05D007073 ORTHO05D008855 2.7e-27 125.2 89 74.2
Phvul.002G236200 Phaseolus vulgaris HOM05D007073 ORTHO05D008855 2.7e-27 125.2 87 72.4
Cc02_g29940 Coffea canephora HOM05D007073 ORTHO05D008855 3.6e-27 124.8 83 72.3
Aqoxy6G02335_Aqoxy6G02336 Aquilegia oxysepala HOM05D000558 ORTHO05D001857 1.0e-26 123.2 83 74.7
A09p35370 Brassica napus HOM05D007073 ORTHO05D008855 1.0e-26 123.2 83 74.7
AUR62019145 Chenopodium quinoa HOM05D007073 ORTHO05D008855 1.0e-26 123.2 83 73.5
MELO3C010995.2 Cucumis melo HOM05D007073 ORTHO05D008855 1.0e-26 123.2 89 73.0
BcaB07g32745 Brassica carinata HOM05D007073 ORTHO05D008855 1.8e-26 122.5 83 73.5
BcaC05g27117 Brassica carinata HOM05D007073 ORTHO05D008855 1.8e-26 122.5 83 73.5
BcaC05g27119 Brassica carinata HOM05D007073 ORTHO05D008855 1.8e-26 122.5 83 73.5
C05p29960 Brassica napus HOM05D007073 ORTHO05D008855 1.8e-26 122.5 83 73.5
C05p29970 Brassica napus HOM05D007073 ORTHO05D008855 1.8e-26 122.5 83 73.5
BolC5t31732H Brassica oleracea HOM05D007073 ORTHO05D008855 1.8e-26 122.5 83 73.5
BolC5t31736H Brassica oleracea HOM05D007073 ORTHO05D008855 1.8e-26 122.5 83 73.5
Medtr8g085700 Medicago truncatula HOM05D007073 ORTHO05D008855 1.8e-26 122.5 93 72.0
AL1G45120 Arabidopsis lyrata HOM05D007073 ORTHO05D008855 2.3e-26 122.1 88 70.5
CANSAT11G0546 Cannabis sativa HOM05D007073 ORTHO05D008855 2.3e-26 122.1 83 74.7
Thhalv10009135m.g Eutrema salsugineum HOM05D007073 ORTHO05D008855 4.0e-26 121.3 83 73.5
Zm00001eb001980 Zea mays HOM05D007073 ORTHO05D008855 4.0e-26 121.3 86 69.8
Nitab4.5_0005185g0010 Nicotiana tabacum HOM05D007073 ORTHO05D008855 5.2e-26 120.9 86 72.1
Solyc04g081160.3 Solanum lycopersicum HOM05D007073 ORTHO05D008855 6.7e-26 120.6 80 75.0
Sopen04g034780 Solanum pennellii HOM05D007073 ORTHO05D008855 6.7e-26 120.6 80 75.0
EL10Ac1g00450 Beta vulgaris HOM05D007073 ORTHO05D008855 8.8e-26 120.2 83 72.3
Lalb_Chr12g0205331 Lupinus albus HOM05D007073 ORTHO05D008855 8.8e-26 120.2 89 66.3
SGA_v2.0_scaffold92G28274 Striga asiatica HOM05D007073 ORTHO05D008855 8.8e-26 120.2 89 70.8
THA.LOC104810648 Tarenaya hassleriana HOM05D007073 ORTHO05D008855 8.8e-26 120.2 82 74.4
CARHR030330 Cardamine hirsuta HOM05D007073 ORTHO05D008855 1.2e-25 119.8 83 72.3
Peaxi162Scf00287g01620 Petunia axillaris HOM05D007073 ORTHO05D008855 1.2e-25 119.8 80 72.5
Peaxi162Scf01591g00005 Petunia axillaris HOM05D007073 ORTHO05D008855 1.2e-25 119.8 80 72.5
HPP92_025607 Vanilla planifolia HOM05D007073 ORTHO05D008855 1.2e-25 119.8 86 69.8
Aa31LG6G9870 Aethionema arabicum HOM05D007073 ORTHO05D008855 2.0e-25 119.0 82 73.2
Carub.0001s2918 Capsella rubella HOM05D007073 ORTHO05D008855 2.0e-25 119.0 83 72.3
SalBow7G2056 Salvia bowleyana HOM05D007073 ORTHO05D008855 2.0e-25 119.0 89 68.5
MD15G1015600 Malus domestica HOM05D007073 ORTHO05D008855 2.6e-25 118.6 89 67.4
CDE08G0828 Ceratophyllum demersum HOM05D007073 ORTHO05D008855 3.3e-25 118.2 81 71.6
PGSC0003DMG400003718 Solanum tuberosum HOM05D007073 ORTHO05D008855 3.3e-25 118.2 80 73.8
Zm00001eb403590 Zea mays HOM05D007073 ORTHO05D008855 3.3e-25 118.2 86 67.4
CANSAT11G2499 Cannabis sativa HOM05D007073 ORTHO05D008855 4.4e-25 117.9 85 69.4
Sp1g26740 Schrenkiella parvula HOM05D007073 ORTHO05D008855 4.4e-25 117.9 83 71.1
Manes.18G016450 Manihot esculenta HOM05D007073 ORTHO05D008855 5.7e-25 117.5 85 70.6
arahy.Tifrunner.gnm1.ann1.0LW32C Arachis hypogaea HOM05D007073 ORTHO05D008855 7.5e-25 117.1 83 72.3
unitig_32.g11146 Utricularia gibba HOM05D007073 ORTHO05D008855 7.5e-25 117.1 89 68.5
CAN.G1271.5 Capsicum annuum HOM05D007073 ORTHO05D008855 9.7e-25 116.7 80 73.8
MD08G1016500 Malus domestica HOM05D007073 ORTHO05D008855 9.7e-25 116.7 86 70.9
SGA_v2.0_scaffold92G28275 Striga asiatica HOM05D007073 ORTHO05D008855 1.7e-24 115.9 89 69.7
Sc26g0003150 Simmondsia chinensis HOM05D007073 ORTHO05D008855 2.8e-24 115.2 82 72.0
Actinidia26593 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.8e-24 114.4 83 75.9
AT1G30845 Arabidopsis thaliana HOM05D007073 ORTHO05D008855 4.8e-24 114.4 83 69.9
MSTRG.1215 Avicennia marina HOM05D007073 ORTHO05D008855 4.8e-24 114.4 89 66.3
ATR0945G003 Amborella trichopoda HOM05D007073 ORTHO05D008855 7.0e-23 110.5 83 68.7
arahy.Tifrunner.gnm1.ann1.F1G2D9 Arachis hypogaea HOM05D007073 ORTHO05D008855 3.5e-22 108.2 106 56.6
Actinidia37317 Actinidia chinensis HOM05D007073 ORTHO05D008855 2.9e-21 105.1 62 83.9
FAN04G0335 Fragaria x ananassa HOM05D007403 ORTHO05D009306 1.3e-16 89.7 53 83.0
Eucgr.L01259 Eucalyptus grandis HOM05D007073 ORTHO05D008855 1.4e-15 86.3 50 82.0
arahy.Tifrunner.gnm1.ann1.JR36LC Arachis hypogaea HOM05D007073 ORTHO05D008855 2.4e-15 85.5 59 72.9
SEGI_10735 Sequoiadendron giganteum HOM05D007073 ORTHO05D008855 2.4e-15 85.5 87 57.5
C05p30020 Brassica napus HOM05D007073 ORTHO05D008855 9.1e-15 83.6 61 67.2
Actinidia04603 Actinidia chinensis HOM05D007073 ORTHO05D008855 4.5e-14 81.3 57 77.2
Eucgr.H01037 Eucalyptus grandis HOM05D007073 ORTHO05D008855 5.9e-14 80.9 44 86.4
Mapoly0121s0038 Marchantia polymorpha HOM05D007073 ORTHO05D008855 2.9e-13 78.6 90 52.2
MD13G1087600 Malus domestica HOM05D007073 ORTHO05D008855 7.2e-12 73.9 44 81.8
Pp3c8_14860 Physcomitrium patens HOM05D007073 ORTHO05D008855 3.0e-10 68.6 83 55.4
BolC5t31739H Brassica oleracea HOM05D007073 ORTHO05D008855 6.8e-10 67.4 42 73.8
DCAR_017499 Daucus carota HOM05D007073 ORTHO05D008855 1.5e-09 66.2 36 94.4


User provided reference genes

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