Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z050666 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.4e-51 206.1 106 100.0
Gohir.1Z049492 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.6e-23 111.3 96 66.7
Gohir.A03G072900 Gossypium hirsutum HOM05D001070 ORTHO05D002096 1.0e-22 110.2 105 63.8
Gohir.D03G074712 Gossypium hirsutum HOM05D001070 ORTHO05D002096 5.6e-21 104.4 66 83.3
Gohir.A04G057652 Gossypium hirsutum HOM05D001070 ORTHO05D002096 9.5e-21 103.6 66 83.3
Gohir.A10G117450 Gossypium hirsutum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 48 89.6
Solyc00g500043.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 57 80.7
Solyc00g500084.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 57 80.7
Solyc00g500088.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.6e-15 84.7 57 80.7
Solyc00g500126.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 57 80.7
Solyc00g500196.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 57 80.7
Solyc00g500278.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 57 80.7
Solyc00g500324.1 Solanum lycopersicum HOM05D001070 ORTHO05D010233 4.6e-15 84.7 57 80.7
Solyc12g036550.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 57 80.7
PGSC0003DMG400004187 Solanum tuberosum HOM05D001070 ORTHO05D002096 4.6e-15 84.7 57 80.7
Peaxi162Scf00139g00015 Petunia axillaris HOM05D001070 ORTHO05D002096 1.0e-14 83.6 57 78.9
Nitab4.5_0023521g0010 Nicotiana tabacum HOM05D000388 ORTHO05D000473 2.3e-14 82.4 110 52.7
Nn4g25224 Nelumbo nucifera HOM05D001070 ORTHO05D005132 8.6e-14 80.5 84 57.1
Solyc10g062235.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 8.6e-14 80.5 57 78.9
Gohir.A11G056832 Gossypium hirsutum HOM05D001070 ORTHO05D002096 9.5e-13 77.0 48 87.5
Nitab4.5_0012234g0030 Nicotiana tabacum HOM05D001070 ORTHO05D002096 9.5e-13 77.0 57 73.7
Gohir.A09G046100 Gossypium hirsutum HOM05D001070 ORTHO05D002096 3.6e-12 75.1 109 52.3
Solyc11g044680.3 Solanum lycopersicum HOM05D001070 ORTHO05D002096 4.7e-12 74.7 57 75.4
DCAR_019125 Daucus carota HOM05D001070 ORTHO05D002096 8.1e-12 73.9 57 73.7
DCAR_032544 Daucus carota HOM05D001070 ORTHO05D002096 8.1e-12 73.9 57 73.7
Oeu010690.1 Olea europaea HOM05D001070 ORTHO05D002096 1.4e-11 73.2 54 74.1
Solyc04g045540.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.8e-11 72.8 57 70.2
Potri.002G008176 Populus trichocarpa HOM05D001070 ORTHO05D002096 8.9e-11 70.5 57 71.9
Sabra06G0005100 Salix brachista HOM05D001711 ORTHO05D002847 8.9e-11 70.5 57 71.9
Solyc08g043160.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.5e-10 69.7 70 61.4
SalBow1G3373 Salvia bowleyana HOM05D001070 ORTHO05D002096 2.0e-10 69.3 57 68.4
SalBow1G6555 Salvia bowleyana HOM05D001070 ORTHO05D002096 2.0e-10 69.3 57 68.4
Oeu022558.1 Olea europaea HOM05D001070 ORTHO05D002096 7.6e-10 67.4 51 72.5
PSO210G1984 Papaver somniferum HOM05D001070 ORTHO05D002096 2.9e-09 65.5 64 60.9
PSO541G0682 Papaver somniferum HOM05D001070 ORTHO05D002096 2.9e-09 65.5 64 60.9
PSO548G0067 Papaver somniferum HOM05D001070 ORTHO05D002096 2.9e-09 65.5 64 60.9
BcaC04g20701 Brassica carinata HOM05D001070 ORTHO05D002096 4.9e-09 64.7 50 66.0
CiPaw.01G098400 Carya illinoinensis HOM05D001070 ORTHO05D002096 4.9e-09 64.7 37 86.5
Ciclev10014005m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.9e-09 64.7 57 66.7
Ciclev10027654m.g Citrus clementina HOM05D001070 ORTHO05D002096 4.9e-09 64.7 57 66.7
AL7G50370 Arabidopsis lyrata HOM05D001070 ORTHO05D002096 6.4e-09 64.3 50 68.0
BraSC103t45423Z Brassica rapa HOM05D001070 ORTHO05D002096 6.4e-09 64.3 76 52.6
CARHR282400 Cardamine hirsuta HOM05D001070 ORTHO05D002096 6.4e-09 64.3 50 68.0
A04p09360 Brassica napus HOM05D001070 ORTHO05D002096 1.1e-08 63.5 31 100.0
BolSC28t60312H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-08 63.5 31 100.0
BolSC28t60368H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-08 63.5 31 100.0
BolSC35t60697H Brassica oleracea HOM05D001070 ORTHO05D002096 1.1e-08 63.5 76 52.6
BraSC159t45727Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-08 63.5 31 100.0
BraSC48t46237Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-08 63.5 31 100.0
BraSC54t46367Z Brassica rapa HOM05D001070 ORTHO05D002096 1.1e-08 63.5 31 100.0
Solyc11g021310.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 1.4e-08 63.2 46 73.9
TAR633G1337 Trochodendron aralioides HOM05D001070 ORTHO05D002096 1.4e-08 63.2 36 88.9
C09p25530 Brassica napus HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC29t60500H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC29t60623H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC35t60698H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC35t60710H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC44t60817H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC44t60828H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC45t60915H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BolSC46t60964H Brassica oleracea HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
BraSC138t45540Z Brassica rapa HOM05D001070 ORTHO05D002096 3.2e-08 62.0 50 64.0
Ciclev10010879m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
Ciclev10013978m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
Ciclev10013980m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
Ciclev10013987m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
Ciclev10013999m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
Ciclev10014002m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
Ciclev10027640m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
Ciclev10030452m.g Citrus clementina HOM05D001070 ORTHO05D002096 3.2e-08 62.0 111 43.2
EL10Ac5g11665 Beta vulgaris HOM05D001070 ORTHO05D002096 5.4e-08 61.2 43 72.1
EL10Ac7g17376 Beta vulgaris HOM05D001070 ORTHO05D002096 5.4e-08 61.2 43 72.1
CAN.G1045.8 Capsicum annuum HOM05D001070 ORTHO05D002096 7.1e-08 60.8 30 100.0
CAN.G965.9 Capsicum annuum HOM05D001070 ORTHO05D002096 7.1e-08 60.8 30 100.0
PGR081G0002 Punica granatum HOM05D001070 ORTHO05D002096 7.1e-08 60.8 40 77.5
PGR111G0057 Punica granatum HOM05D001070 ORTHO05D002096 7.1e-08 60.8 36 86.1
BraSC138t45529Z Brassica rapa HOM05D001070 ORTHO05D002096 9.2e-08 60.5 53 60.4
Migut.D01388 Erythranthe guttata HOM05D001070 ORTHO05D002096 1.2e-07 60.1 33 90.9
Nn064s42217 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.2e-07 60.1 36 83.3
Nn212s45207 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.2e-07 60.1 36 83.3
Nn304s46233 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.2e-07 60.1 36 83.3
RcHm_v2.0_Chr4g0392791 Rosa chinensis HOM05D001070 ORTHO05D002096 1.2e-07 60.1 36 86.1
Nn031s41609 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.6e-07 59.7 101 44.6
Potri.011G073900 Populus trichocarpa HOM05D001070 ORTHO05D002096 3.5e-07 58.5 46 71.7
EL10Ac4g08269 Beta vulgaris HOM05D001070 ORTHO05D002096 4.6e-07 58.2 44 70.5
Nitab4.5_0004137g0050 Nicotiana tabacum HOM05D001070 ORTHO05D002096 6.0e-07 57.8 30 93.3
Nn1g08628 Nelumbo nucifera HOM05D001070 ORTHO05D002096 1.3e-06 56.6 80 45.0
Peaxi162Scf00080g00516 Petunia axillaris HOM05D001070 ORTHO05D002096 1.7e-06 56.2 46 69.6
Peaxi162Scf00130g00416 Petunia axillaris HOM05D001070 ORTHO05D002096 3.0e-06 55.5 42 69.0
Peaxi162Scf00536g00047 Petunia axillaris HOM05D001070 ORTHO05D002096 3.0e-06 55.5 42 69.0
Lju5009P0T27 Lonicera japonica HOM05D001070 ORTHO05D002096 5.1e-06 54.7 30 83.3
Duzib256G0005 Durio zibethinus HOM05D001070 ORTHO05D002096 6.6e-06 54.3 63 50.8
MBI01_g06564_MAGBIO Magnolia biondii HOM05D001070 ORTHO05D002096 8.6e-06 53.9 85 43.5
Solyc00g500040.1 Solanum lycopersicum HOM05D001070 ORTHO05D013014 8.6e-06 53.9 40 72.5
Solyc00g500190.1 Solanum lycopersicum HOM05D001070 ORTHO05D002096 8.6e-06 53.9 40 72.5


User provided reference genes

Program Settings