Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049782 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.1e-53 211.5 102 100.0
Gohir.A04G039285 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.1e-53 211.5 102 100.0
Gohir.A05G323732 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.1e-53 211.5 102 100.0
Gohir.A13G086695 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.8e-51 204.5 102 95.1
Gorai.007G237800 Gossypium raimondii HOM05D001966 ORTHO05D007227 4.2e-42 174.5 102 85.3
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 6.3e-38 160.6 114 74.6
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 1.6e-33 146.0 125 64.0
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 1.6e-33 146.0 125 64.0
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 5.4e-29 131.0 135 59.3
BcaC04g22012 Brassica carinata HOM05D001966 ORTHO05D007227 4.2e-26 121.3 115 59.1
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 1.6e-25 119.4 106 67.9
SalBow1G8704 Salvia bowleyana HOM05D001966 ORTHO05D007227 7.8e-20 100.5 66 75.8
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-18 96.7 72 68.1
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 1.8e-16 89.4 66 72.7
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 1.8e-16 89.4 65 72.3
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 2.3e-16 89.0 62 74.2
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.4e-13 79.7 61 68.9
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.4e-13 79.7 61 68.9
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.4e-13 79.7 61 68.9
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.4e-13 79.7 61 68.9
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 1.4e-13 79.7 61 68.9
COL.COLO4_00694 Corchorus olitorius HOM05D001966 ORTHO05D007227 1.2e-12 76.6 35 100.0
COL.COLO4_02908 Corchorus olitorius HOM05D001966 ORTHO05D007227 1.2e-12 76.6 35 100.0
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 1.0e-11 73.6 62 64.5
Gohir.D09G040060 Gossypium hirsutum HOM05D001966 ORTHO05D007227 6.6e-11 70.9 42 83.3
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 5.6e-10 67.8 35 88.6
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 7.3e-10 67.4 42 78.6
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 9.5e-10 67.0 32 93.8
HanXRQChr14g0462871 Helianthus annuus HOM05D005084 ORTHO05D006254 3.6e-09 65.1 34 85.3
unitig_91.g26520 Utricularia gibba HOM05D001966 ORTHO05D007227 3.6e-09 65.1 32 87.5
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 4.7e-09 64.7 67 55.2
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 8.0e-09 63.9 30 93.3
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 8.0e-09 63.9 30 93.3
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 8.0e-09 63.9 30 93.3
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 5.2e-08 61.2 29 89.7
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 1.2e-07 60.1 28 96.4
HPP92_028386 Vanilla planifolia HOM05D009726 ORTHO05D010055 2.0e-07 59.3 34 88.2
EL10Ac8g19706 Beta vulgaris HOM05D001966 ORTHO05D010588 3.4e-07 58.5 102 43.1
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 3.4e-07 58.5 30 86.7
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 4.4e-07 58.2 91 46.2
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 9.8e-07 57.0 29 89.7
arahy.Tifrunner.gnm1.ann1.3QB7SN Arachis hypogaea HOM05D001966 ORTHO05D007227 1.3e-06 56.6 64 48.4
VMungo0647G0507 Vigna mungo HOM05D006032 ORTHO05D007227 3.7e-06 55.1 29 82.8
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 4.9e-06 54.7 31 80.6
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 4.9e-06 54.7 31 80.6
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 6.4e-06 54.3 48 58.3
arahy.Tifrunner.gnm1.ann1.F2PHFK Arachis hypogaea HOM05D000890 ORTHO05D000697 8.3e-06 53.9 44 63.6


User provided reference genes

Program Settings