Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049574 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.7e-91 339.3 171 100.0
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 8.5e-88 327.0 166 98.8
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.9e-87 325.9 166 98.2
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 9.1e-82 307.0 165 92.1
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 1.0e-80 303.5 165 90.9
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 1.5e-79 299.7 165 90.9
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 2.6e-76 288.9 166 87.3
Gohir.A11G282734 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.2e-74 282.0 165 84.8
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 9.2e-74 280.4 165 84.8
Gohir.D11G296200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.5e-73 278.5 165 84.2
TAR627G0860 Trochodendron aralioides HOM05D004029 ORTHO05D004613 1.9e-66 256.1 166 76.5
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 5.4e-66 254.6 166 75.9
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 1.6e-65 253.1 169 75.1
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 2.0e-65 252.7 163 76.7
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 4.6e-65 251.5 163 76.1
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 1.3e-64 250.0 166 75.9
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 3.0e-64 248.8 166 73.5
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 6.6e-64 247.7 166 73.5
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 1.9e-63 246.1 166 72.3
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 2.5e-63 245.7 169 75.7
Atru.chr2.2811 Acer truncatum HOM05D004029 ORTHO05D004613 3.3e-63 245.4 163 77.3
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 3.3e-63 245.4 165 73.9
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 4.3e-63 245.0 170 72.4
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 7.3e-63 244.2 164 74.4
MELO3C018224.2 Cucumis melo HOM05D004029 ORTHO05D004613 1.6e-62 243.0 162 73.5
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 2.1e-62 242.7 166 71.1
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 2.8e-62 242.3 162 74.7
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 3.6e-62 241.9 162 74.7
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 1.1e-61 240.4 161 73.9
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 1.1e-61 240.4 166 70.5
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 1.1e-61 240.4 165 73.9
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 1.4e-61 240.0 119 100.0
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 2.3e-61 239.2 146 79.5
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 2.3e-61 239.2 167 72.5
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 3.1e-61 238.8 146 79.5
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 3.1e-61 238.8 146 79.5
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 3.1e-61 238.8 146 79.5
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 3.1e-61 238.8 146 79.5
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 3.1e-61 238.8 146 79.5
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 3.1e-61 238.8 147 79.6
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 3.1e-61 238.8 165 73.3
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 4.0e-61 238.4 166 69.9
AL8G29790 Arabidopsis lyrata HOM05D004029 ORTHO05D004613 5.2e-61 238.0 147 79.6
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 5.2e-61 238.0 146 78.8
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 5.2e-61 238.0 146 78.8
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 6.8e-61 237.7 148 79.1
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 1.2e-60 236.9 146 78.1
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 1.2e-60 236.9 146 78.1
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 1.5e-60 236.5 161 73.9
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 2.0e-60 236.1 145 79.3
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 2.6e-60 235.7 164 72.0
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 2.6e-60 235.7 168 69.6
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 2.6e-60 235.7 146 78.1
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 3.4e-60 235.3 146 78.1
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 7.5e-60 234.2 161 73.9
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 7.5e-60 234.2 166 71.1
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 1.7e-59 233.0 162 71.6
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 4.9e-59 231.5 166 70.5
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 1.1e-58 230.3 160 71.2
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 1.4e-58 229.9 162 69.8
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 2.4e-58 229.2 157 72.0
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 2.4e-58 229.2 165 68.5
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 3.2e-58 228.8 165 69.7
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 5.4e-58 228.0 160 70.0
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 1.2e-57 226.9 166 68.1
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 2.7e-57 225.7 152 73.7
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 2.7e-57 225.7 143 79.7
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 3.5e-57 225.3 164 68.9
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 3.5e-57 225.3 164 68.9
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 3.5e-57 225.3 167 69.5
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 4.6e-57 224.9 164 69.5
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 4.6e-57 224.9 160 73.1
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 4.6e-57 224.9 160 73.1
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 4.6e-57 224.9 160 73.1
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 4.6e-57 224.9 165 69.1
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 6.0e-57 224.6 160 73.1
VMungo1080G0798 Vigna mungo HOM05D004029 ORTHO05D004613 6.0e-57 224.6 166 67.5
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 1.0e-56 223.8 160 71.9
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 1.0e-56 223.8 166 68.7
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 1.3e-56 223.4 160 72.5
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 1.3e-56 223.4 151 74.8
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 3.9e-56 221.9 150 73.3
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 5.1e-56 221.5 169 68.0
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 1.5e-55 219.9 159 67.3
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 1.5e-55 219.9 161 67.1
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 1.9e-55 219.5 144 75.0
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 4.3e-55 218.4 143 75.5
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 4.3e-55 218.4 164 68.9
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 4.3e-55 218.4 150 71.3
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 4.3e-55 218.4 163 67.5
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 5.6e-55 218.0 144 73.6
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 7.3e-55 217.6 148 73.6
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 9.5e-55 217.2 163 68.1
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 1.2e-54 216.9 145 73.1
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 2.8e-54 215.7 162 66.7
Oeu008022.1 Olea europaea HOM05D004029 ORTHO05D004613 3.6e-54 215.3 165 66.1
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 4.7e-54 214.9 153 70.6
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 6.2e-54 214.5 162 66.0
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 6.2e-54 214.5 167 64.7
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 8.1e-54 214.2 170 63.5
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 1.4e-53 213.4 170 63.5
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 2.3e-53 212.6 162 65.4
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 8.9e-53 210.7 144 70.1
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 8.9e-53 210.7 163 63.8
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 7.6e-52 207.6 146 68.5
Psat1g176800 Pisum sativum HOM05D004029 ORTHO05D004613 2.9e-51 205.7 161 64.6
SEGI_15865 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 1.4e-50 203.4 173 60.1
CDE05G1182 Ceratophyllum demersum HOM05D004029 ORTHO05D004613 4.1e-50 201.8 157 61.8
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 7.1e-50 201.1 168 61.3
Psat1g176880 Pisum sativum HOM05D004029 ORTHO05D004613 1.0e-48 197.2 158 63.3
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 1.1e-45 187.2 157 61.8
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 3.3e-39 165.6 177 48.6
Cpa.g.sc80.100 Carica papaya HOM05D004029 ORTHO05D004613 9.9e-36 154.1 94 78.7
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 2.2e-35 152.9 140 52.9
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 2.3e-32 142.9 150 46.0
CBR_g48014 Chara braunii HOM05D004029 ORTHO05D004613 3.6e-30 135.6 160 40.6
Psat4g074000 Pisum sativum HOM05D004029 ORTHO05D004613 8.1e-30 134.4 142 49.3
Dinv08328 Davidia involucrata HOM05D004029 ORTHO05D004613 1.4e-29 133.7 100 65.0
ATR0693G140 Amborella trichopoda HOM05D004029 ORTHO05D004613 3.3e-23 112.5 84 65.5
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 3.8e-19 99.0 64 71.9
Psat0ss25761g0120 Pisum sativum HOM05D000735 ORTHO05D004613 1.9e-18 96.7 75 58.7
Lsat_1_v5_gn_6_53560 Lactuca sativa HOM05D004029 ORTHO05D004613 5.5e-18 95.1 64 71.9
SMO115G0239 Selaginella moellendorffii HOM05D004029 ORTHO05D004613 4.8e-14 82.0 85 48.2
HPP92_020356 Vanilla planifolia HOM05D004029 ORTHO05D004613 6.2e-14 81.6 50 74.0
CSS0007909 Camellia sinensis var. sinensis HOM05D001136 ORTHO05D004613 3.8e-11 72.4 45 75.6
HPP92_020357 Vanilla planifolia HOM05D004029 ORTHO05D004613 2.1e-09 66.6 55 60.0


User provided reference genes

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