Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049525 Gossypium hirsutum HOM05D004776 ORTHO05D005777 1.2e-71 273.1 138 100.0
Gohir.A13G232250 Gossypium hirsutum HOM05D004776 ORTHO05D005777 7.9e-68 260.4 138 97.1
Duzib170G0082 Durio zibethinus HOM05D004776 ORTHO05D005777 1.5e-66 256.1 143 93.0
Gorai.013G268700 Gossypium raimondii HOM05D004776 ORTHO05D005777 3.3e-66 255.0 143 93.0
Gohir.D13G237900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 4.3e-66 254.6 143 93.7
Thecc.09G348100 Theobroma cacao HOM05D004776 ORTHO05D005777 1.3e-65 253.1 143 90.9
Duzib168G1494 Durio zibethinus HOM05D004776 ORTHO05D005777 3.7e-65 251.5 143 90.9
COL.COLO4_34701 Corchorus olitorius HOM05D004776 ORTHO05D005777 4.8e-65 251.1 143 89.5
Gohir.D03G137500 Gossypium hirsutum HOM05D004776 ORTHO05D005777 6.3e-65 250.8 143 89.5
Gorai.003G144600 Gossypium raimondii HOM05D004776 ORTHO05D005777 2.4e-64 248.8 143 88.8
vmacro14409 Vaccinium macrocarpon HOM05D004776 ORTHO05D005777 1.5e-63 246.1 143 88.1
Gohir.A03G030900 Gossypium hirsutum HOM05D004776 ORTHO05D005777 2.0e-63 245.7 143 88.8
Actinidia20436 Actinidia chinensis HOM05D004776 ORTHO05D005777 3.4e-63 245.0 143 88.8
CSS0005795 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 3.4e-63 245.0 143 88.8
CSS0042525 Camellia sinensis var. sinensis HOM05D004776 ORTHO05D005777 3.4e-63 245.0 143 88.8
CiPaw.13G118600 Carya illinoinensis HOM05D004776 ORTHO05D005777 3.4e-63 245.0 143 87.4
Phvul.005G131900 Phaseolus vulgaris HOM05D004776 ORTHO05D005777 7.7e-63 243.8 143 87.4
VMungo1080G0818 Vigna mungo HOM05D004776 ORTHO05D006187 7.7e-63 243.8 143 87.4
Lj3g0025221 Lotus japonicus HOM05D004776 ORTHO05D005777 1.0e-62 243.4 143 87.4
Cc01_g10560 Coffea canephora HOM05D004776 ORTHO05D005777 1.3e-62 243.0 143 86.0
Haze_23751 Corylus avellana HOM05D004776 ORTHO05D005777 1.3e-62 243.0 143 87.4
DCAR_006106 Daucus carota HOM05D004776 ORTHO05D005777 1.3e-62 243.0 143 86.0
QL01p015865 Quercus lobata HOM05D004776 ORTHO05D005777 3.8e-62 241.5 142 86.6
Medtr2g095420 Medicago truncatula HOM05D004776 ORTHO05D005777 5.0e-62 241.1 143 86.0
Prupe.6G108100 Prunus persica HOM05D004776 ORTHO05D005777 6.5e-62 240.7 143 86.0
TWI79G1687 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 6.5e-62 240.7 143 85.3
GSVIVG01031509001 Vitis vinifera HOM05D004776 ORTHO05D005777 6.5e-62 240.7 143 85.3
Atru.chr3.3552 Acer truncatum HOM05D004776 ORTHO05D005777 8.5e-62 240.4 143 84.6
CANSAT54G2950 Cannabis sativa HOM05D004776 ORTHO05D005777 8.5e-62 240.4 143 85.3
Hma1.2p1_0569F.1_g180290 Hydrangea macrophylla HOM05D004776 ORTHO05D005777 8.5e-62 240.4 143 86.0
Potri.009G007900 Populus trichocarpa HOM05D004776 ORTHO05D005777 8.5e-62 240.4 143 86.7
Actinidia03704 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.4e-61 239.6 143 86.7
Actinidia14011 Actinidia chinensis HOM05D004776 ORTHO05D005777 1.4e-61 239.6 143 86.7
FAN26G3463 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.5e-61 238.8 143 85.3
Glyma.13G323400 Glycine max HOM05D004776 ORTHO05D005777 2.5e-61 238.8 143 85.3
Manes.04G015500 Manihot esculenta HOM05D004776 ORTHO05D005777 2.5e-61 238.8 143 85.3
SalBow3G4083 Salvia bowleyana HOM05D004776 ORTHO05D005777 3.2e-61 238.4 143 83.9
TWI31G0757 Tripterygium wilfordii HOM05D004776 ORTHO05D005777 3.2e-61 238.4 143 84.6
Aqoxy2G01783 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 4.2e-61 238.0 143 84.6
CsaV3_1G013400 Cucumis sativus L. HOM05D004776 ORTHO05D005777 4.2e-61 238.0 143 84.6
Eucgr.B02538 Eucalyptus grandis HOM05D004776 ORTHO05D005777 4.2e-61 238.0 143 83.9
RcHm_v2.0_Chr2g0122071 Rosa chinensis HOM05D004776 ORTHO05D005777 4.2e-61 238.0 143 84.6
TPR.G11629 Trifolium pratense HOM05D004776 ORTHO05D005777 4.2e-61 238.0 143 86.0
FvH4_1g24650 Fragaria vesca HOM05D004776 ORTHO05D005777 5.5e-61 237.7 143 85.3
FAN19G0403 Fragaria x ananassa HOM05D004776 ORTHO05D005777 5.5e-61 237.7 143 85.3
ClCG03G002670 Citrullus lanatus HOM05D004776 ORTHO05D005777 7.2e-61 237.3 143 84.6
HanXRQChr11g0346181 Helianthus annuus HOM05D004776 ORTHO05D005777 7.2e-61 237.3 143 85.3
MBI18_g10191_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 7.2e-61 237.3 143 85.3
MBI18_g43296_MAGBIO Magnolia biondii HOM05D004776 ORTHO05D005777 9.4e-61 236.9 143 84.6
SGA_v2.0_scaffold116G32209 Striga asiatica HOM05D004776 ORTHO05D005777 1.2e-60 236.5 143 83.2
FAN28G2552 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.6e-60 236.1 143 84.6
MD11G1145200 Malus domestica HOM05D004776 ORTHO05D005777 1.6e-60 236.1 143 83.9
Sed0027733 Sechium edule HOM05D004776 ORTHO05D005777 1.6e-60 236.1 143 83.9
TAR623G0387 Trochodendron aralioides HOM05D004776 ORTHO05D005777 2.1e-60 235.7 143 86.7
FAN23G0844 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.7e-60 235.3 143 84.6
Nn2g11574 Nelumbo nucifera HOM05D004776 ORTHO05D005777 2.7e-60 235.3 143 85.3
Psat0s3241g0040 Pisum sativum HOM05D004776 ORTHO05D005777 3.6e-60 235.0 143 84.6
Ciclev10028099m.g Citrus clementina HOM05D004776 ORTHO05D005777 4.7e-60 234.6 143 83.2
PGR094G0002 Punica granatum HOM05D004776 ORTHO05D005777 6.1e-60 234.2 143 83.2
PGR094G0004 Punica granatum HOM05D004776 ORTHO05D005777 6.1e-60 234.2 143 83.2
PGR102G1642 Punica granatum HOM05D004776 ORTHO05D005777 6.1e-60 234.2 143 83.2
ECA248G3913 Erigeron canadensis HOM05D004776 ORTHO05D005777 7.9e-60 233.8 143 85.3
Oeu018486.2 Olea europaea HOM05D004776 ORTHO05D005777 7.9e-60 233.8 143 84.6
Sc05g0005060 Simmondsia chinensis HOM05D004776 ORTHO05D005777 2.3e-59 232.3 143 86.7
EL10Ac9g22573 Beta vulgaris HOM05D004776 ORTHO05D005777 3.9e-59 231.5 143 85.3
Lalb_Chr03g0027621 Lupinus albus HOM05D004776 ORTHO05D005777 3.9e-59 231.5 143 82.5
MSTRG.17776 Avicennia marina HOM05D004776 ORTHO05D005777 5.1e-59 231.1 144 81.9
Rhsim01G0212300 Rhododendron simsii HOM05D004776 ORTHO05D005777 5.1e-59 231.1 172 73.8
Solyc06g074960.4 Solanum lycopersicum HOM05D004776 ORTHO05D005777 6.7e-59 230.7 143 83.2
Sopen06g031360 Solanum pennellii HOM05D004776 ORTHO05D005777 6.7e-59 230.7 143 83.2
PGSC0003DMG400007163 Solanum tuberosum HOM05D004776 ORTHO05D005777 6.7e-59 230.7 143 83.2
AL5G23500 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 8.8e-59 230.3 138 83.3
arahy.Tifrunner.gnm1.ann1.MGN1WG Arachis hypogaea HOM05D004776 ORTHO05D005777 1.1e-58 229.9 143 81.8
PSO801G0074 Papaver somniferum HOM05D004776 ORTHO05D005777 1.1e-58 229.9 143 83.2
arahy.Tifrunner.gnm1.ann1.K18VCE Arachis hypogaea HOM05D004776 ORTHO05D005777 1.5e-58 229.6 143 81.8
CAN.G1755.5 Capsicum annuum HOM05D004776 ORTHO05D005777 2.0e-58 229.2 143 82.5
BcaB05g23422 Brassica carinata HOM05D004776 ORTHO05D005777 2.6e-58 228.8 143 81.8
PSO339G3038 Papaver somniferum HOM05D004776 ORTHO05D005777 2.6e-58 228.8 143 81.8
arahy.Tifrunner.gnm1.ann1.69IQEU Arachis hypogaea HOM05D004776 ORTHO05D005777 3.3e-58 228.4 143 81.1
Sp5g16230 Schrenkiella parvula HOM05D004776 ORTHO05D005777 3.3e-58 228.4 143 81.8
AL5G23530 Arabidopsis lyrata HOM05D004776 ORTHO05D005777 4.4e-58 228.0 143 81.8
arahy.Tifrunner.gnm1.ann1.UZ8W9W Arachis hypogaea HOM05D004776 ORTHO05D005777 4.4e-58 228.0 143 81.1
BcaC09g49697 Brassica carinata HOM05D004776 ORTHO05D005777 4.4e-58 228.0 143 81.1
A01p26580 Brassica napus HOM05D004776 ORTHO05D005777 4.4e-58 228.0 143 81.1
C01p33820 Brassica napus HOM05D004776 ORTHO05D005777 4.4e-58 228.0 143 81.1
BolC1t03347H Brassica oleracea HOM05D004776 ORTHO05D005777 4.4e-58 228.0 143 81.1
BraA01t02588Z Brassica rapa HOM05D004776 ORTHO05D005777 4.4e-58 228.0 143 81.1
A05p13030 Brassica napus HOM05D004776 ORTHO05D005777 7.4e-58 227.3 143 80.4
BraA05t20243Z Brassica rapa HOM05D004776 ORTHO05D005777 7.4e-58 227.3 143 80.4
AT3G45040 Arabidopsis thaliana HOM05D004776 ORTHO05D005777 9.7e-58 226.9 143 81.1
AUR62014926 Chenopodium quinoa HOM05D004776 ORTHO05D005777 9.7e-58 226.9 143 83.2
AUR62029209 Chenopodium quinoa HOM05D004776 ORTHO05D005777 9.7e-58 226.9 143 83.2
Aa31LG4G14110 Aethionema arabicum HOM05D004776 ORTHO05D005777 1.3e-57 226.5 143 80.4
Carub.0005s1082 Capsella rubella HOM05D004776 ORTHO05D005777 1.3e-57 226.5 143 81.1
PSO339G3219 Papaver somniferum HOM05D004776 ORTHO05D005777 1.3e-57 226.5 143 83.2
ATR1132G031 Amborella trichopoda HOM05D004776 ORTHO05D005777 2.2e-57 225.7 143 82.5
BcaC02g11340 Brassica carinata HOM05D004776 ORTHO05D005777 2.8e-57 225.3 143 79.7
C04p17380 Brassica napus HOM05D004776 ORTHO05D005777 2.8e-57 225.3 143 79.7
BolC4t23289H Brassica oleracea HOM05D004776 ORTHO05D005777 2.8e-57 225.3 143 79.7
CARHR150930 Cardamine hirsuta HOM05D004776 ORTHO05D005777 2.8e-57 225.3 143 80.4
THA.LOC104799516 Tarenaya hassleriana HOM05D004776 ORTHO05D005777 3.7e-57 224.9 147 81.6
PSO063G2354 Papaver somniferum HOM05D004776 ORTHO05D005777 1.4e-56 223.0 143 80.4
Peaxi162Scf01159g00227 Petunia axillaris HOM05D004776 ORTHO05D005777 2.4e-56 222.2 134 85.1
Sabra09G0004700 Salix brachista HOM05D004776 ORTHO05D005777 5.3e-56 221.1 162 75.3
Nitab4.5_0006015g0020 Nicotiana tabacum HOM05D004776 ORTHO05D005777 1.3e-54 216.5 134 82.1
Manes.11G150502 Manihot esculenta HOM05D004776 ORTHO05D005777 6.5e-54 214.2 139 81.3
Nitab4.5_0000106g0400 Nicotiana tabacum HOM05D004776 ORTHO05D005777 6.5e-54 214.2 138 81.2
Cpa.g.sc1.25 Carica papaya HOM05D004776 ORTHO05D005777 7.2e-53 210.7 134 82.8
SEGI_23621 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 7.2e-53 210.7 143 74.8
SEGI_33157 Sequoiadendron giganteum HOM05D004776 ORTHO05D005777 1.2e-52 209.9 143 74.8
Oeu029897.2 Olea europaea HOM05D004776 ORTHO05D005777 1.4e-51 206.5 197 60.9
BcaNung05690 Brassica carinata HOM05D004776 ORTHO05D005777 1.8e-51 206.1 136 77.9
Aqoxy3G00574 Aquilegia oxysepala HOM05D004776 ORTHO05D005777 3.0e-51 205.3 133 78.2
MELO3C035466.2 Cucumis melo HOM05D004776 ORTHO05D005777 1.1e-50 203.4 209 57.4
FAN27G1933 Fragaria x ananassa HOM05D004776 ORTHO05D005777 9.7e-50 200.3 128 82.8
CDE06G1539 Ceratophyllum demersum HOM05D004776 ORTHO05D005777 3.7e-49 198.4 130 78.5
Lj1A206T59 Lonicera japonica HOM05D004776 ORTHO05D005777 8.0e-44 180.6 105 87.6
Ca_01388_v3 Cicer arietinum L. HOM05D004776 ORTHO05D006187 1.4e-43 179.9 105 87.6
Lsat_1_v5_gn_1_63021 Lactuca sativa HOM05D004776 ORTHO05D005777 2.0e-42 176.0 138 68.1
unitig_8.g3670 Utricularia gibba HOM05D004776 ORTHO05D005777 1.7e-41 172.9 104 83.7
HPP92_025805 Vanilla planifolia HOM05D004776 ORTHO05D005777 1.7e-41 172.9 105 84.8
Cfa010344 Carpinus fangiana HOM05D004776 ORTHO05D005777 9.1e-40 167.2 97 87.6
Dinv29356 Davidia involucrata HOM05D004776 ORTHO05D006187 1.4e-32 143.3 71 91.5
Thhalv10002461m.g Eutrema salsugineum HOM05D004776 ORTHO05D005777 1.4e-32 143.3 84 85.7
MD03G1126100 Malus domestica HOM05D004776 ORTHO05D005777 2.4e-32 142.5 137 59.9
Mapoly0124s0030 Marchantia polymorpha HOM05D004776 ORTHO05D005777 1.2e-31 140.2 144 54.9
FAN05G3839 Fragaria x ananassa HOM05D004776 ORTHO05D005777 2.5e-29 132.5 88 79.5
Pp3c13_8200 Physcomitrium patens HOM05D004776 ORTHO05D005777 4.2e-29 131.7 144 54.2
FAN07G0780 Fragaria x ananassa HOM05D004776 ORTHO05D005777 1.5e-26 123.2 92 71.7
Glyma.12G177300 Glycine max HOM05D004776 ORTHO05D005777 1.7e-22 109.8 87 66.7
MD00G1033800 Malus domestica HOM05D004776 ORTHO05D005777 6.6e-22 107.8 127 49.6
Zm00001eb232190 Zea mays HOM05D004776 ORTHO05D005777 3.3e-21 105.5 58 86.2
Migut.N02573 Erythranthe guttata HOM05D004776 ORTHO05D005777 4.7e-20 101.7 54 83.3
Atru.chr3.3551 Acer truncatum HOM05D004776 ORTHO05D005777 3.5e-15 85.5 44 90.9
FAN10G3619 Fragaria x ananassa HOM05D004776 ORTHO05D005777 4.7e-12 75.1 52 78.8
MCO11G119 Micromonas commoda HOM05D004776 ORTHO05D005777 6.8e-11 71.2 149 35.6
Peaxi162Scf00351g00526 Petunia axillaris HOM05D004776 ORTHO05D005777 1.7e-06 56.6 65 52.3
CBR_g19018 Chara braunii HOM05D000019 ORTHO05D000002 5.1e-06 55.1 89 40.4


User provided reference genes

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