Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049488 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.8e-92 340.9 174 100.0
Gohir.A05G245251 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.8e-92 340.9 174 100.0
Gohir.A05G245201 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.5e-87 326.2 174 96.0
Gohir.A13G213100 Gossypium hirsutum HOM05D007679 ORTHO05D009560 4.3e-87 324.7 174 94.8
Gohir.A13G213232 Gossypium hirsutum HOM05D007679 ORTHO05D009560 4.3e-87 324.7 174 94.8
Gohir.A13G213133 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-86 323.2 174 94.3
Gohir.A13G213166 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-86 323.2 174 94.3
Gohir.A13G213199 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-86 323.2 174 94.3
Gohir.A05G245150 Gossypium hirsutum HOM05D007679 ORTHO05D009560 8.1e-86 320.5 174 93.7
Gohir.A13G213265 Gossypium hirsutum HOM05D007679 ORTHO05D009560 6.9e-85 317.4 174 92.0
Gorai.009G256900 Gossypium raimondii HOM05D007679 ORTHO05D009560 9.0e-85 317.0 174 90.2
Gorai.009G257100 Gossypium raimondii HOM05D007679 ORTHO05D009560 9.0e-85 317.0 174 90.2
Gorai.N024500 Gossypium raimondii HOM05D007679 ORTHO05D009560 9.0e-85 317.0 174 90.2
Gorai.009G257000 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.0e-84 315.8 174 89.7
Gorai.009G256100 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.6e-84 315.5 174 90.8
Gorai.009G256800 Gossypium raimondii HOM05D007679 ORTHO05D009560 4.5e-84 314.7 174 90.2
Gorai.009G257300 Gossypium raimondii HOM05D007679 ORTHO05D009560 5.8e-84 314.3 174 90.2
Gohir.A05G245336 Gossypium hirsutum HOM05D007679 ORTHO05D009560 7.6e-84 313.9 174 92.5
Gohir.D05G246900 Gossypium hirsutum HOM05D007679 ORTHO05D009560 9.9e-84 313.5 174 90.8
Gohir.A05G245318 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-83 313.2 174 91.4
Gorai.009G257400 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.3e-83 313.2 174 89.7
Gorai.009G257500 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.7e-83 312.8 174 89.1
Gorai.009G256400 Gossypium raimondii HOM05D007679 ORTHO05D009560 4.9e-83 311.2 174 88.5
Gohir.1Z049388 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.1e-82 310.1 174 90.8
Gohir.A05G245300 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.1e-82 310.1 174 90.8
Gohir.A05G244800 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.9e-82 309.3 174 89.7
Gohir.A05G245072 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.4e-82 308.9 174 90.8
Gohir.A05G245372 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.4e-82 308.9 174 90.2
Gorai.009G255800 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.2e-82 308.5 174 90.2
Gorai.009G256700 Gossypium raimondii HOM05D007679 ORTHO05D009560 5.5e-82 307.8 174 86.8
Gohir.D05G246800 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.1e-81 305.8 174 88.5
Gohir.D05G246400 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.8e-80 302.8 174 86.8
Gorai.009G256000 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.9e-80 301.6 174 88.5
Gohir.D05G245700 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.3e-79 298.5 174 87.4
Gohir.D05G245800 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.6e-79 297.7 174 86.8
Gohir.D05G246050 Gossypium hirsutum HOM05D007679 ORTHO05D009560 7.4e-79 297.4 174 86.8
Gohir.A05G244700 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.6e-78 296.2 174 86.2
Gorai.009G257600 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.7e-78 295.0 174 88.5
Gorai.009G256300 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.8e-77 292.7 172 83.7
Gorai.009G255700 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.1e-77 292.0 174 85.1
Gohir.A05G245390 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.5e-76 289.7 174 87.4
Gorai.009G256200 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.6e-76 288.9 173 83.2
Gohir.A05G245054 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-72 276.6 174 83.3
Gorai.009G255900 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.7e-70 268.5 174 79.9
Gohir.D05G246025 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.4e-69 265.8 172 79.1
Gohir.D05G245666 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.3e-69 264.6 174 79.9
Gohir.D05G246075 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.0e-68 262.7 174 78.2
Gohir.D05G246701 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.1e-66 256.9 173 78.0
Gohir.A05G245000 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.5e-66 254.6 139 91.4
Gohir.D05G245900 Gossypium hirsutum HOM05D007679 ORTHO05D009560 7.2e-66 254.2 174 76.4
Gorai.009G257200 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.2e-65 253.4 174 76.4
Gohir.A05G245036 Gossypium hirsutum HOM05D007679 ORTHO05D009560 6.1e-65 251.1 174 78.2
Gohir.A05G245408 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.0e-64 250.4 158 83.5
Gohir.D05G246600 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.3e-64 250.0 147 85.7
Gorai.009G255600 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.3e-64 250.0 174 74.1
Gohir.A05G244900 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.7e-63 244.6 174 75.9
Gohir.A05G245018 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.7e-63 244.6 174 77.0
Gohir.D05G246100 Gossypium hirsutum HOM05D007679 ORTHO05D009560 6.3e-62 241.1 139 87.1
Gorai.009G256500 Gossypium raimondii HOM05D007679 ORTHO05D009560 5.9e-60 234.6 174 70.7
Gohir.D05G246000 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.0e-59 233.8 173 71.1
Gorai.009G255500 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.1e-57 226.1 165 68.5
Gorai.009G264900 Gossypium raimondii HOM05D007679 ORTHO05D009560 3.9e-56 221.9 166 65.7
Gohir.D05G252300 Gossypium hirsutum HOM05D007679 ORTHO05D009560 7.4e-55 217.6 175 62.9
Gohir.A05G245100 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.1e-53 213.8 174 69.5
Gohir.A05G245001 Gossypium hirsutum HOM05D007679 ORTHO05D009560 9.1e-53 210.7 174 69.0
Gohir.A05G251500 Gossypium hirsutum HOM05D007679 ORTHO05D009560 5.9e-52 208.0 173 60.1
Gohir.A05G244650 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.5e-50 202.6 116 87.9
Gorai.009G256600 Gossypium raimondii HOM05D007679 ORTHO05D009560 1.2e-49 200.3 173 64.7
Thecc.08G156900 Theobroma cacao HOM05D007679 ORTHO05D009560 1.8e-48 196.4 161 59.0
Gohir.D05G245633 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.7e-46 189.9 142 70.4
Gohir.D05G245750 Gossypium hirsutum HOM05D007679 ORTHO05D009560 4.8e-46 188.3 113 85.8
Gohir.D05G246500 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.6e-44 183.3 106 86.8
Duzib041G0061 Durio zibethinus HOM05D007679 ORTHO05D009560 5.9e-44 181.4 163 55.2
Gohir.A05G245354 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.6e-41 172.2 100 89.0
Thecc.08G157300 Theobroma cacao HOM05D007679 ORTHO05D009560 3.8e-35 152.1 153 49.7
Duzib041G0498 Durio zibethinus HOM05D007679 ORTHO05D009560 8.5e-35 151.0 150 50.7
Duzib093G1264 Durio zibethinus HOM05D007679 ORTHO05D009560 5.2e-32 141.7 155 45.8
COL.COLO4_34260 Corchorus olitorius HOM05D007679 ORTHO05D009560 5.0e-27 125.2 160 40.6
Gohir.A05G245500 Gossypium hirsutum HOM05D007679 ORTHO05D009560 3.3e-26 122.5 162 40.7
Gohir.D05G247000 Gossypium hirsutum HOM05D007679 ORTHO05D009560 2.8e-25 119.4 150 41.3
Gorai.009G257700 Gossypium raimondii HOM05D007679 ORTHO05D009560 2.8e-25 119.4 150 41.3
COL.COLO4_06833 Corchorus olitorius HOM05D007679 ORTHO05D009560 4.1e-21 105.5 131 37.4
Gohir.D05G246850 Gossypium hirsutum HOM05D007679 ORTHO05D009560 1.6e-20 103.6 69 81.2
COL.COLO4_08899 Corchorus olitorius HOM05D007679 ORTHO05D009560 3.5e-20 102.4 160 36.2
COL.COLO4_03793 Corchorus olitorius HOM05D007679 ORTHO05D009560 3.4e-15 85.9 164 31.1
Cpa.g.sc49.92 Carica papaya HOM05D007679 ORTHO05D009560 5.8e-15 85.1 166 30.7
COL.COLO4_13382 Corchorus olitorius HOM05D007679 ORTHO05D009560 7.5e-15 84.7 104 37.5
Cpa.g.sc49.91 Carica papaya HOM05D007679 ORTHO05D009560 2.9e-14 82.8 164 34.1
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 1.8e-13 80.1 153 34.0
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 1.8e-13 80.1 151 35.1
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 2.4e-13 79.7 144 32.6
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 3.2e-13 79.3 154 31.2
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 7.0e-13 78.2 155 30.3
COL.COLO4_13804 Corchorus olitorius HOM05D007679 ORTHO05D009560 1.2e-12 77.4 170 29.4
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 2.7e-12 76.3 153 32.7
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 7.8e-12 74.7 159 32.1
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 7.8e-12 74.7 151 33.1
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 3.0e-11 72.8 164 31.7
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 8.6e-11 71.2 152 32.2
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 8.6e-11 71.2 152 32.2
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 1.1e-10 70.9 128 32.8
Cpa.g.sc49.90 Carica papaya HOM05D007679 ORTHO05D009560 1.9e-10 70.1 154 31.8
FAN24G0571 Fragaria x ananassa HOM05D004894 ORTHO05D005689 2.5e-10 69.7 133 36.1
CSS0042410 Camellia sinensis var. sinensis HOM05D007679 ORTHO05D009560 9.5e-10 67.8 168 26.2
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.2e-09 67.4 154 32.5
FAN27G2788 Fragaria x ananassa HOM05D004894 ORTHO05D009560 1.2e-09 67.4 133 34.6
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 2.8e-09 66.2 153 30.1
COL.COLO4_13383 Corchorus olitorius HOM05D007679 ORTHO05D009560 3.6e-09 65.9 69 40.6
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 6.2e-09 65.1 153 29.4
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 8.0e-09 64.7 145 31.0
Manes.02G182301 Manihot esculenta HOM05D004894 ORTHO05D005689 2.3e-08 63.2 150 28.0
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 2.3e-08 63.2 125 34.4
Atru.chr13.2013 Acer truncatum HOM05D004894 ORTHO05D005689 6.8e-08 61.6 158 25.9
Carub.0008s1007 Capsella rubella HOM05D007751 ORTHO05D009813 8.9e-08 61.2 111 28.8
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 8.9e-08 61.2 147 28.6
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 8.9e-08 61.2 124 30.6
AL8G24070 Arabidopsis lyrata HOM05D007751 ORTHO05D009813 3.4e-07 59.3 108 28.7
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-07 59.3 147 30.6
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-07 59.3 147 30.6
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-07 59.3 154 31.2
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 3.4e-07 59.3 154 31.2
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 3.4e-07 59.3 149 26.8
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 4.4e-07 58.9 142 30.3
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 4.4e-07 58.9 160 28.1
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 4.4e-07 58.9 160 28.1
A10p08560 Brassica napus HOM05D007751 ORTHO05D009813 5.8e-07 58.5 133 30.1
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 9.8e-07 57.8 111 32.4
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 9.8e-07 57.8 149 29.5
BraSC37t46147Z Brassica rapa HOM05D007751 ORTHO05D009813 1.3e-06 57.4 133 29.3
Peaxi162Scf00079g00202 Petunia axillaris HOM05D011489 ORTHO05D014472 1.3e-06 57.4 154 29.2
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 1.3e-06 57.4 159 27.0
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 2.9e-06 56.2 145 32.4
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 3.7e-06 55.8 142 25.4
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 4.9e-06 55.5 133 28.6
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 6.4e-06 55.1 160 26.2
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 6.4e-06 55.1 142 27.5
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 6.4e-06 55.1 151 26.5


User provided reference genes

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