Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049434 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.5e-294 1015.4 485 100.0
Gorai.012G000300 Gossypium raimondii HOM05D007641 ORTHO05D007630 3.3e-286 987.6 529 91.5
Gohir.D08G007350 Gossypium hirsutum HOM05D007641 ORTHO05D007630 6.5e-250 867.1 522 83.0
Gorai.004G000600 Gossypium raimondii HOM05D007641 ORTHO05D007630 1.8e-247 859.0 522 82.2
Gohir.D12G000401 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.0e-239 831.2 518 81.3
Gohir.1Z049529 Gossypium hirsutum HOM05D007641 ORTHO05D007630 8.2e-237 823.5 448 90.0
Gohir.A08G000032 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.7e-224 781.2 518 77.2
Thecc.09G364100 Theobroma cacao HOM05D007641 ORTHO05D007630 2.0e-150 536.6 533 55.3
Duzib168G1492 Durio zibethinus HOM05D007641 ORTHO05D007630 1.0e-125 454.5 517 51.5
COL.COLO4_11217 Corchorus olitorius HOM05D007641 ORTHO05D007630 8.3e-112 408.3 520 46.2
Gorai.002G193100 Gossypium raimondii HOM05D007641 ORTHO05D007630 1.2e-99 367.9 233 79.8
Gohir.D01G155850 Gossypium hirsutum HOM05D007641 ORTHO05D007630 1.6e-86 324.3 208 79.8
Atru.chr10.2293 Acer truncatum HOM05D007641 ORTHO05D007630 2.0e-57 227.6 547 33.6
QL01p024477 Quercus lobata HOM05D007641 ORTHO05D007630 9.3e-55 218.8 547 33.3
Dinv28733 Davidia involucrata HOM05D007641 ORTHO05D007630 1.8e-53 214.5 533 33.8
Potri.013G157800 Populus trichocarpa HOM05D007641 ORTHO05D007630 3.5e-46 190.3 543 30.6
Haze_24474 Corylus avellana HOM05D007641 ORTHO05D007630 3.4e-41 173.7 511 29.5
Actinidia34497 Actinidia chinensis HOM05D007641 ORTHO05D007630 1.3e-40 171.8 525 30.9
Gohir.D01G148301 Gossypium hirsutum HOM05D007641 ORTHO05D007630 4.9e-40 169.9 82 95.1
Gorai.002G184200 Gossypium raimondii HOM05D007641 ORTHO05D007630 4.2e-39 166.8 82 92.7
Sabra13G0126700 Salix brachista HOM05D007641 ORTHO05D002352 1.8e-37 161.4 544 29.0
Hma1.2p1_0119F.1_g056956 Hydrangea macrophylla HOM05D007641 ORTHO05D007630 1.6e-35 154.8 507 30.0
CiPaw.13G063300 Carya illinoinensis HOM05D007641 ORTHO05D007630 6.3e-35 152.9 543 28.4
Gohir.A05G417101 Gossypium hirsutum HOM05D007641 ORTHO05D007630 8.8e-29 132.5 63 100.0
vmacro14640 Vaccinium macrocarpon HOM05D007641 ORTHO05D007630 2.5e-28 131.0 516 26.2
Rhsim01G0243500 Rhododendron simsii HOM05D007641 ORTHO05D007630 1.5e-25 121.7 327 29.1
Prupe.6G040800 Prunus persica HOM05D007641 ORTHO05D007630 8.8e-21 105.9 414 29.2
Ciclev10001550m.g Citrus clementina HOM05D007641 ORTHO05D007630 1.5e-20 105.1 303 30.0
Lj2A1102G26 Lonicera japonica HOM05D007641 ORTHO05D007630 1.0e-16 92.4 332 30.7
Lalb_Chr18g0054201 Lupinus albus HOM05D007641 ORTHO05D007630 2.9e-16 90.9 467 25.5
MD11G1053300 Malus domestica HOM05D007641 ORTHO05D007630 1.4e-15 88.6 264 31.8
arahy.Tifrunner.gnm1.ann1.F8RHVN Arachis hypogaea HOM05D007641 ORTHO05D007630 2.5e-15 87.8 504 24.2
arahy.Tifrunner.gnm1.ann1.4PHV2I Arachis hypogaea HOM05D007641 ORTHO05D007630 4.2e-15 87.0 505 24.2
FAN11G1956 Fragaria x ananassa HOM05D007641 ORTHO05D007630 5.7e-12 76.6 543 23.9
FAN16G1217 Fragaria x ananassa HOM05D007641 ORTHO05D007630 4.1e-10 70.5 411 24.3
FAN25G3378 Fragaria x ananassa HOM05D007641 ORTHO05D007630 9.1e-10 69.3 539 23.6
FvH4_3g40550 Fragaria vesca HOM05D007641 ORTHO05D007630 1.6e-09 68.6 411 24.6


User provided reference genes

Program Settings