Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z049410 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.6e-29 132.1 67 100.0
Gohir.A09G249500 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.9e-28 127.5 67 97.0
Gohir.D13G007800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 4.5e-24 114.0 64 89.1
Duzib147G0897 Durio zibethinus HOM05D003958 ORTHO05D004864 1.7e-23 112.1 64 89.1
Thecc.04G013700 Theobroma cacao HOM05D003958 ORTHO05D004864 1.7e-23 112.1 64 89.1
Dinv35088 Davidia involucrata HOM05D003958 ORTHO05D004864 3.8e-23 110.9 64 87.5
Gohir.D09G027100 Gossypium hirsutum HOM05D003958 ORTHO05D004864 3.8e-23 110.9 64 87.5
Gorai.006G031600 Gossypium raimondii HOM05D003958 ORTHO05D004864 3.8e-23 110.9 64 87.5
Duzib147G0566 Durio zibethinus HOM05D003958 ORTHO05D004864 4.9e-23 110.5 64 87.5
Nitab4.5_0008215g0010 Nicotiana tabacum HOM05D003958 ORTHO05D004864 4.9e-23 110.5 64 87.5
Duzib147G0735 Durio zibethinus HOM05D003958 ORTHO05D004864 6.4e-23 110.2 64 87.5
Manes.17G113700 Manihot esculenta HOM05D003958 ORTHO05D004864 6.4e-23 110.2 64 85.9
Sopen02g031390 Solanum pennellii HOM05D003958 ORTHO05D004864 8.4e-23 109.8 64 84.4
MSTRG.3157 Avicennia marina HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
CSS0020788 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
CSS0020854 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
CAN.G206.10 Capsicum annuum HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
Haze_14701 Corylus avellana HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
Migut.H00096 Erythranthe guttata HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
Gohir.A09G027800 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.1e-22 109.4 64 85.9
Peaxi162Scf00129g01325 Petunia axillaris HOM05D003958 ORTHO05D004864 1.4e-22 109.0 64 85.9
Atru.chr6.2341 Acer truncatum HOM05D003958 ORTHO05D004864 1.9e-22 108.6 64 84.4
CANSAT64G0951 Cannabis sativa HOM05D003958 ORTHO05D004864 1.9e-22 108.6 64 84.4
CiPaw.03G040700 Carya illinoinensis HOM05D003958 ORTHO05D004864 1.9e-22 108.6 64 84.4
Ciclev10016011m.g Citrus clementina HOM05D003958 ORTHO05D004864 1.9e-22 108.6 64 84.4
Nitab4.5_0002739g0040 Nicotiana tabacum HOM05D003958 ORTHO05D004864 1.9e-22 108.6 64 85.9
Aqoxy2G00425 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 2.4e-22 108.2 64 84.4
Phvul.011G172200 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 2.4e-22 108.2 64 84.4
Eucgr.I01766 Eucalyptus grandis HOM05D003958 ORTHO05D004864 3.2e-22 107.8 63 85.7
QL02p075632 Quercus lobata HOM05D003958 ORTHO05D004864 3.2e-22 107.8 64 84.4
Cc02_g12190 Coffea canephora HOM05D003958 ORTHO05D004864 4.2e-22 107.5 64 82.8
COL.COLO4_29053 Corchorus olitorius HOM05D003958 ORTHO05D004864 4.2e-22 107.5 64 84.4
FvH4_6g51011 Fragaria vesca HOM05D003958 ORTHO05D004864 4.2e-22 107.5 64 84.4
FAN09G1134 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.2e-22 107.5 64 84.4
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 4.2e-22 107.5 64 84.4
Lj3g0001252 Lotus japonicus HOM05D003958 ORTHO05D004864 4.2e-22 107.5 64 84.4
Aqoxy3G00906 Aquilegia oxysepala HOM05D003958 ORTHO05D004864 5.4e-22 107.1 64 82.8
DCAR_009028 Daucus carota HOM05D003958 ORTHO05D004864 5.4e-22 107.1 64 82.8
Lj7A595G65 Lonicera japonica HOM05D003958 ORTHO05D004864 5.4e-22 107.1 64 85.9
Lju41A38T12 Lonicera japonica HOM05D003958 ORTHO05D004864 5.4e-22 107.1 64 84.4
THA.LOC104821089 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 5.4e-22 107.1 64 84.4
ClCG01G008920 Citrullus lanatus HOM05D003958 ORTHO05D004864 7.1e-22 106.7 64 82.8
Oeu057051.1 Olea europaea HOM05D003958 ORTHO05D004864 7.1e-22 106.7 63 84.1
PSO832G3613 Papaver somniferum HOM05D003958 ORTHO05D004864 7.1e-22 106.7 64 81.2
Sed0009763 Sechium edule HOM05D003958 ORTHO05D004864 7.1e-22 106.7 64 81.2
PGSC0003DMG400000483 Solanum tuberosum HOM05D003958 ORTHO05D004864 7.1e-22 106.7 64 84.4
TAR622G1043 Trochodendron aralioides HOM05D003958 ORTHO05D004864 7.1e-22 106.7 64 84.4
MELO3C021808.2 Cucumis melo HOM05D003958 ORTHO05D004864 9.3e-22 106.3 64 81.2
CsaV3_1G037790 Cucumis sativus L. HOM05D003958 ORTHO05D004864 9.3e-22 106.3 64 81.2
RcHm_v2.0_Chr2g0172551 Rosa chinensis HOM05D003958 ORTHO05D004864 9.3e-22 106.3 64 84.4
AUR62023705 Chenopodium quinoa HOM05D003958 ORTHO05D004864 1.2e-21 105.9 64 81.2
ECA232G3491 Erigeron canadensis HOM05D003958 ORTHO05D004864 1.2e-21 105.9 64 81.2
Ca_00369_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 1.6e-21 105.5 64 81.2
Thhalv10014133m.g Eutrema salsugineum HOM05D003958 ORTHO05D004864 1.6e-21 105.5 62 83.9
Nn7g37719 Nelumbo nucifera HOM05D003958 ORTHO05D004864 1.6e-21 105.5 64 82.8
Prupe.3G287900 Prunus persica HOM05D003958 ORTHO05D004864 1.6e-21 105.5 64 82.8
EL10Ac9g21169 Beta vulgaris HOM05D003958 ORTHO05D004864 2.1e-21 105.1 64 82.8
Ca_00876_v3 Cicer arietinum L. HOM05D003958 ORTHO05D004864 2.1e-21 105.1 64 79.7
CiPaw.04G026700 Carya illinoinensis HOM05D003958 ORTHO05D004864 2.7e-21 104.8 64 82.8
MD17G1031500 Malus domestica HOM05D003958 ORTHO05D004864 2.7e-21 104.8 64 82.8
Sabra18G0098500 Salix brachista HOM05D003958 ORTHO05D004864 2.7e-21 104.8 63 79.4
Sabra18G0098900 Salix brachista HOM05D003958 ORTHO05D004864 2.7e-21 104.8 63 79.4
Sabra18G0099100 Salix brachista HOM05D003958 ORTHO05D004864 2.7e-21 104.8 63 79.4
Sabra18G0100500 Salix brachista HOM05D003958 ORTHO05D004864 2.7e-21 104.8 63 79.4
Sabra18G0101000 Salix brachista HOM05D003958 ORTHO05D004864 2.7e-21 104.8 63 79.4
Hund02774 Selenicereus undatus HOM05D003958 ORTHO05D004864 2.7e-21 104.8 62 82.3
TPR.G33516 Trifolium pratense HOM05D003958 ORTHO05D004864 2.7e-21 104.8 64 81.2
Glyma.13G234900 Glycine max HOM05D003958 ORTHO05D004864 3.5e-21 104.4 64 82.8
Lsat_1_v5_gn_4_183181 Lactuca sativa HOM05D003958 ORTHO05D004864 3.5e-21 104.4 64 79.7
MBI05_g22036_MAGBIO Magnolia biondii HOM05D003958 ORTHO05D004864 3.5e-21 104.4 64 81.2
PSO063G1059 Papaver somniferum HOM05D003958 ORTHO05D004864 3.5e-21 104.4 64 79.7
TWI12G0059 Tripterygium wilfordii HOM05D003958 ORTHO05D004864 3.5e-21 104.4 64 81.2
unitig_62.g23558 Utricularia gibba HOM05D003958 ORTHO05D004864 3.5e-21 104.4 64 82.8
MD09G1029500 Malus domestica HOM05D003958 ORTHO05D004864 4.6e-21 104.0 64 79.7
GSVIVG01032441001 Vitis vinifera HOM05D000462 ORTHO05D002607 4.6e-21 104.0 64 81.2
Medtr6g047800 Medicago truncatula HOM05D003958 ORTHO05D004864 6.0e-21 103.6 62 80.6
TPR.G11724 Trifolium pratense HOM05D003958 ORTHO05D004864 6.0e-21 103.6 63 81.0
AL6G25360 Arabidopsis lyrata HOM05D003958 ORTHO05D004864 7.9e-21 103.2 64 81.2
AT5G14600 Arabidopsis thaliana HOM05D003958 ORTHO05D004864 7.9e-21 103.2 64 81.2
Carub.0006s1277 Capsella rubella HOM05D003958 ORTHO05D004864 7.9e-21 103.2 64 81.2
Lalb_Chr03g0031671 Lupinus albus HOM05D003958 ORTHO05D004864 7.9e-21 103.2 64 79.7
Potri.018G120500 Populus trichocarpa HOM05D003958 ORTHO05D004864 7.9e-21 103.2 63 77.8
CARHR198720 Cardamine hirsuta HOM05D003958 ORTHO05D004864 1.0e-20 102.8 64 81.2
Glyma.15G078000 Glycine max HOM05D003958 ORTHO05D004864 1.0e-20 102.8 64 81.2
THA.LOC104802398 Tarenaya hassleriana HOM05D003958 ORTHO05D004864 1.0e-20 102.8 62 80.6
Medtr2g014590 Medicago truncatula HOM05D003958 ORTHO05D004864 1.3e-20 102.4 64 78.1
Aa31LG11G15350 Aethionema arabicum HOM05D003958 ORTHO05D004864 1.8e-20 102.1 64 79.7
HanXRQChr09g0255001 Helianthus annuus HOM05D003958 ORTHO05D004864 1.8e-20 102.1 64 78.1
ATR0057G029 Amborella trichopoda HOM05D003958 ORTHO05D004864 2.3e-20 101.7 64 79.7
Psat1g202680 Pisum sativum HOM05D003958 ORTHO05D004864 2.3e-20 101.7 64 78.1
Psat1g092800 Pisum sativum HOM05D003958 ORTHO05D004864 3.0e-20 101.3 64 78.1
Lj2g0025561 Lotus japonicus HOM05D003958 ORTHO05D004864 3.9e-20 100.9 64 78.1
PGR054G0003 Punica granatum HOM05D003958 ORTHO05D004864 3.9e-20 100.9 64 78.1
PGR119G1149 Punica granatum HOM05D003958 ORTHO05D004864 3.9e-20 100.9 64 78.1
arahy.Tifrunner.gnm1.ann1.38SPRB Arachis hypogaea HOM05D003958 ORTHO05D004864 5.1e-20 100.5 64 76.6
arahy.Tifrunner.gnm1.ann1.CB8F3G Arachis hypogaea HOM05D003958 ORTHO05D004864 5.1e-20 100.5 64 76.6
A10p24040 Brassica napus HOM05D003958 ORTHO05D004864 6.7e-20 100.1 64 78.1
C09p62510 Brassica napus HOM05D003958 ORTHO05D004864 6.7e-20 100.1 64 78.1
BolC9t59091H Brassica oleracea HOM05D003958 ORTHO05D004864 6.7e-20 100.1 64 78.1
BraA10t44467Z Brassica rapa HOM05D003958 ORTHO05D004864 6.7e-20 100.1 64 78.1
arahy.Tifrunner.gnm1.ann1.M5ZQAR Arachis hypogaea HOM05D003958 ORTHO05D004864 8.7e-20 99.8 64 78.1
arahy.Tifrunner.gnm1.ann1.Z5MU8N Arachis hypogaea HOM05D003958 ORTHO05D004864 1.1e-19 99.4 63 77.8
Sp6g29430 Schrenkiella parvula HOM05D003958 ORTHO05D004864 1.1e-19 99.4 62 79.0
Sc03g0007660 Simmondsia chinensis HOM05D003958 ORTHO05D004864 1.1e-19 99.4 63 74.6
CDE06G0036 Ceratophyllum demersum HOM05D003958 ORTHO05D004864 1.5e-19 99.0 64 76.6
Phvul.006G181700 Phaseolus vulgaris HOM05D003958 ORTHO05D004864 1.5e-19 99.0 64 79.7
VMungo0540G0822 Vigna mungo HOM05D003958 ORTHO05D004864 3.3e-19 97.8 64 78.1
Zm00001eb071120 Zea mays HOM05D003958 ORTHO05D004864 3.3e-19 97.8 64 76.6
HPP92_013732 Vanilla planifolia HOM05D003958 ORTHO05D004864 4.3e-19 97.4 64 73.4
BcaNung03113 Brassica carinata HOM05D003958 ORTHO05D004864 5.6e-19 97.1 62 77.4
vmacro18265 Vaccinium macrocarpon HOM05D003958 ORTHO05D004864 7.4e-19 96.7 81 66.7
SEGI_01237 Sequoiadendron giganteum HOM05D003958 ORTHO05D004864 3.6e-18 94.4 61 73.8
BcaC03g13470 Brassica carinata HOM05D003958 ORTHO05D004864 4.8e-18 94.0 62 75.8
Pp3c18_5220 Physcomitrium patens HOM05D003958 ORTHO05D004864 6.2e-18 93.6 63 73.0
CSS0027303 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 8.1e-18 93.2 64 73.4
Cpa.g.sc108.31 Carica papaya HOM05D003958 ORTHO05D004864 8.1e-18 93.2 64 78.1
Os04g0319600 Oryza sativa ssp. japonica HOM05D003958 ORTHO05D004864 1.1e-17 92.8 64 71.9
Mapoly0053s0094 Marchantia polymorpha HOM05D003958 ORTHO05D004864 1.4e-17 92.4 62 67.7
Atru.chr6.2249 Acer truncatum HOM05D003958 ORTHO05D004864 3.1e-17 91.3 57 80.7
AagrBONN_evm.TU.Sc2ySwM_344.690 Anthoceros agrestis HOM05D003958 ORTHO05D004864 3.1e-17 91.3 63 71.4
SMO361G0280 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.7e-15 85.5 64 70.3
SMO361G0823 Selaginella moellendorffii HOM05D003958 ORTHO05D004864 1.7e-15 85.5 64 70.3
arahy.Tifrunner.gnm1.ann1.FV4QAS Arachis hypogaea HOM05D003958 ORTHO05D004864 4.9e-15 84.0 64 70.3
CBR_g9110 Chara braunii HOM05D003958 ORTHO05D004864 4.9e-15 84.0 62 62.9
Gohir.A06G000101 Gossypium hirsutum HOM05D003958 ORTHO05D004864 7.1e-14 80.1 47 87.2
SGA_v2.0_scaffold196G40937 Striga asiatica HOM05D003958 ORTHO05D004864 1.8e-12 75.5 64 65.6
Gohir.A12G000201 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.9e-11 72.0 48 79.2
Cre05.g244236 Chlamydomonas reinhardtii HOM05D003958 ORTHO05D004864 3.7e-10 67.8 60 55.0
AUR62002487 Chenopodium quinoa HOM05D003958 ORTHO05D004864 4.8e-10 67.4 41 85.4
Ah.07g203270 Amaranthus hybridus HOM05D003958 ORTHO05D004864 9.0e-09 63.2 42 81.0
PRCOL_00006622 Prasinoderma coloniale HOM05D003958 ORTHO05D004864 9.0e-09 63.2 63 47.6
Hma1.2p1_0858F.1_g229230 Hydrangea macrophylla HOM05D003958 ORTHO05D004864 1.2e-08 62.8 87 49.4
MCO10G191 Micromonas commoda HOM05D003958 ORTHO05D004864 4.5e-08 60.8 61 50.8
Gohir.A10G243400 Gossypium hirsutum HOM05D003958 ORTHO05D004864 1.0e-07 59.7 34 88.2
Haze_26162 Corylus avellana HOM05D003958 ORTHO05D004864 2.9e-07 58.2 60 48.3
Gohir.A03G000004 Gossypium hirsutum HOM05D003958 ORTHO05D004864 2.9e-07 58.2 34 85.3
CSS0019434 Camellia sinensis var. sinensis HOM05D003958 ORTHO05D004864 3.8e-07 57.8 42 76.2
Eucgr.L02705 Eucalyptus grandis HOM05D003958 ORTHO05D004864 6.5e-07 57.0 33 75.8


User provided reference genes

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