Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 0.0e+00 1526.1 810 100.0
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 0.0e+00 1457.6 848 92.7
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 0.0e+00 1379.0 826 90.8
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 0.0e+00 1266.5 746 92.2
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 0.0e+00 1182.9 859 74.9
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 0.0e+00 1180.2 860 75.1
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 1.4e-292 1009.6 848 66.5
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 1.0e-287 993.4 845 67.1
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 1.6e-285 986.1 813 66.5
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 3.3e-283 978.4 813 65.9
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 5.3e-281 971.1 870 62.8
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 1.2e-277 959.9 867 62.2
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 4.0e-276 954.9 872 64.0
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 3.4e-275 951.8 842 63.5
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 4.4e-275 951.4 692 76.3
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 7.5e-275 950.7 856 64.0
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 2.8e-274 948.7 766 67.5
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.1e-273 944.9 856 62.1
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.2e-272 943.3 841 63.4
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 2.7e-272 942.2 807 64.8
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 2.9e-271 938.7 854 63.6
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 3.2e-270 935.3 832 63.7
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.7e-269 932.2 860 61.7
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 1.1e-265 920.2 811 63.3
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 1.6e-264 916.4 802 64.5
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.7e-263 912.9 872 60.0
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.9e-262 909.4 770 65.6
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 4.7e-261 904.8 833 60.4
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 4.6e-256 888.3 799 63.1
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 7.8e-256 887.5 842 60.7
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 6.6e-255 884.4 799 62.2
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 8.6e-255 884.0 809 61.3
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 5.6e-254 881.3 841 59.8
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 2.8e-253 879.0 797 62.0
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 2.0e-251 872.8 795 60.8
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 2.6e-251 872.5 773 62.4
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 7.8e-248 860.9 715 66.0
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 7.8e-248 860.9 852 58.5
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 1.1e-246 857.1 812 58.7
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.4e-244 850.1 844 56.9
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 2.3e-244 849.4 770 61.6
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 4.4e-243 845.1 803 60.3
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 1.7e-242 843.2 844 56.6
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.1e-241 840.5 855 58.5
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.7e-239 833.2 803 59.7
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.8e-237 825.9 823 56.0
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 1.1e-236 823.9 835 57.1
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 4.0e-236 822.0 813 58.7
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 5.2e-236 821.6 862 55.8
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 3.4e-235 818.9 835 55.7
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 2.9e-234 815.8 796 60.1
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 6.4e-234 814.7 801 57.7
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 5.4e-233 811.6 837 56.4
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 9.2e-233 810.8 844 55.7
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.7e-232 809.3 838 55.8
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 4.6e-232 808.5 808 55.8
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 7.8e-232 807.7 858 55.6
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 7.8e-232 807.7 841 56.2
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 1.0e-231 807.4 823 56.7
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 5.1e-231 805.1 831 57.2
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 6.6e-231 804.7 840 55.4
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 2.5e-230 802.7 834 56.0
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 3.3e-230 802.4 749 60.7
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 2.1e-229 799.7 817 55.6
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 2.8e-229 799.3 817 55.6
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 3.6e-229 798.9 841 56.0
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 4.7e-229 798.5 770 58.4
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 4.7e-229 798.5 836 55.7
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 1.1e-228 797.3 817 55.4
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 1.4e-228 797.0 832 55.5
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 1.8e-228 796.6 750 60.8
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 9.9e-227 790.8 786 58.3
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 8.4e-226 787.7 835 55.7
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 9.3e-225 784.3 839 53.9
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.3e-221 773.9 760 57.9
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 5.4e-217 758.4 885 52.1
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 1.3e-215 753.8 809 56.2
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 2.3e-215 753.1 751 58.2
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 4.8e-213 745.3 842 54.0
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.3e-210 737.3 812 54.3
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 2.3e-199 699.9 791 53.2
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 3.4e-195 686.0 735 55.1
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 1.6e-184 650.6 842 48.6
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 2.2e-181 640.2 793 48.2
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 2.9e-178 629.8 742 50.4
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 7.2e-177 625.2 780 46.5
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 5.7e-174 615.5 538 63.9
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 6.3e-165 585.5 479 66.8
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 3.8e-162 576.2 786 48.5
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 5.7e-158 562.4 591 55.5
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 3.1e-156 556.6 616 53.6
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 3.1e-156 556.6 793 44.1
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.7e-154 550.8 586 56.7
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 2.2e-154 550.4 640 52.0
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 3.6e-144 516.5 552 55.3
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 4.0e-143 513.1 543 55.4
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 6.8e-143 512.3 732 45.4
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 4.9e-141 506.1 583 54.4
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 4.4e-134 483.0 867 39.3
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 1.5e-129 468.0 547 51.0
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.2e-126 458.4 488 53.5
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 3.8e-109 400.2 804 36.6
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.1e-103 382.1 788 34.8
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 1.3e-93 348.6 274 67.5
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 7.1e-84 316.2 254 66.5
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.3e-80 305.4 285 57.5
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 1.0e-74 285.8 205 71.2
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 6.5e-69 266.5 788 29.7
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 7.2e-68 263.1 213 62.0
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 1.2e-67 262.3 395 40.8
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 1.6e-54 218.8 614 30.5
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 5.7e-49 200.3 857 25.6
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.5e-38 164.1 229 48.9
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 2.9e-29 134.8 155 52.3
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 3.5e-14 84.7 68 60.3
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 1.3e-13 82.8 139 40.3
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 7.3e-12 77.0 140 40.7
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 6.2e-11 73.9 127 40.2
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 2.3e-10 72.0 106 44.3
ATR0582G114 Amborella trichopoda HOM05D001356 ORTHO05D005768 3.2e-07 61.6 240 27.9
Lsat_1_v5_gn_3_81460 Lactuca sativa HOM05D001865 ORTHO05D001815 7.1e-07 60.5 163 31.3
Lsat_1_v5_gn_4_154640 Lactuca sativa HOM05D001865 ORTHO05D001815 1.2e-06 59.7 190 28.4
Lj8A736T34 Lonicera japonica HOM05D002086 ORTHO05D004968 2.1e-06 58.9 330 23.6
EL10Ac1g01912 Beta vulgaris HOM05D000716 ORTHO05D002658 3.5e-06 58.2 194 26.3
SEGI_29821 Sequoiadendron giganteum HOM05D000716 ORTHO05D004822 3.5e-06 58.2 168 28.6
Sc12g0005410 Simmondsia chinensis HOM05D000215 ORTHO05D003454 7.8e-06 57.0 303 22.8


User provided reference genes

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