Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G235001 Glycine max HOM05D001646 ORTHO05D001572 2.1e-103 379.0 194 100.0
Glyma.10G153300 Glycine max HOM05D001646 ORTHO05D001572 2.7e-82 308.9 181 86.7
Phvul.007G196000 Phaseolus vulgaris HOM05D001646 ORTHO05D001572 2.6e-48 196.1 174 63.2
Lj5g0007794 Lotus japonicus HOM05D001646 ORTHO05D001572 9.5e-35 151.0 229 45.4
Lalb_Chr15g0077271 Lupinus albus HOM05D001646 ORTHO05D001572 9.2e-30 134.4 238 42.4
Glyma.08G346400 Glycine max HOM05D001646 ORTHO05D001572 6.6e-28 128.3 232 41.4
Glyma.18G157200 Glycine max HOM05D001646 ORTHO05D001572 1.1e-25 120.9 208 41.8
Phvul.008G133500 Phaseolus vulgaris HOM05D001646 ORTHO05D001572 2.6e-24 116.3 232 35.8
Phvul.006G091000 Phaseolus vulgaris HOM05D001646 ORTHO05D001572 3.4e-24 115.9 212 39.2
TPR.G33167 Trifolium pratense HOM05D001646 ORTHO05D001572 8.4e-23 111.3 229 40.6
Lj1g0023339 Lotus japonicus HOM05D001646 ORTHO05D001572 1.1e-22 110.9 211 38.4
Lj1g0006309 Lotus japonicus HOM05D001646 ORTHO05D001572 9.2e-22 107.8 211 37.4
VMungo0540G0915 Vigna mungo HOM05D001646 ORTHO05D001572 9.2e-22 107.8 211 39.3
VMungo0720G0956 Vigna mungo HOM05D001646 ORTHO05D001572 9.2e-22 107.8 138 48.6
Medtr7g113280 Medicago truncatula HOM05D001646 ORTHO05D001572 1.6e-21 107.1 211 37.9
TPR.G13774 Trifolium pratense HOM05D001646 ORTHO05D001572 3.5e-21 105.9 239 38.1
VMungo1383G0448 Vigna mungo HOM05D001646 ORTHO05D001572 4.6e-21 105.5 228 36.8
Psat6g139800 Pisum sativum HOM05D001646 ORTHO05D001572 1.0e-20 104.4 232 37.9
Glyma.03G236800 Glycine max HOM05D001646 ORTHO05D001572 3.9e-20 102.4 193 40.9
TPR.G29183 Trifolium pratense HOM05D001646 ORTHO05D001572 5.6e-19 98.6 204 40.2
TPR.G33161 Trifolium pratense HOM05D001646 ORTHO05D001572 6.2e-18 95.1 230 37.8
TPR.G13763 Trifolium pratense HOM05D001646 ORTHO05D001572 1.1e-17 94.4 236 33.9
TPR.G33214 Trifolium pratense HOM05D001646 ORTHO05D001572 1.1e-17 94.4 234 36.8
TPR.G33229 Trifolium pratense HOM05D001646 ORTHO05D001572 3.1e-17 92.8 237 35.9
TPR.G33232 Trifolium pratense HOM05D001646 ORTHO05D001572 5.2e-17 92.0 218 34.4
Psat3g010280 Pisum sativum HOM05D001646 ORTHO05D001572 7.6e-16 88.2 225 34.2
Psat3g167800 Pisum sativum HOM05D001646 ORTHO05D001572 4.9e-15 85.5 230 35.2
arahy.Tifrunner.gnm1.ann1.68SRGU Arachis hypogaea HOM05D001646 ORTHO05D001572 1.4e-14 84.0 235 33.6
Psat3g010360 Pisum sativum HOM05D001646 ORTHO05D001572 1.4e-14 84.0 174 41.4
QL03p012815 Quercus lobata HOM05D001646 ORTHO05D001572 2.4e-14 83.2 254 30.3
arahy.Tifrunner.gnm1.ann1.U2V952 Arachis hypogaea HOM05D001646 ORTHO05D001572 5.4e-14 82.0 235 33.2
Ca_05809_v3 Cicer arietinum L. HOM05D001646 ORTHO05D001572 1.6e-13 80.5 238 32.4
Medtr7g113220 Medicago truncatula HOM05D001646 ORTHO05D001572 1.3e-12 77.4 204 34.3
FAN09G3458 Fragaria x ananassa HOM05D001646 ORTHO05D001572 8.7e-12 74.7 171 33.3
FAN02G0963 Fragaria x ananassa HOM05D001646 ORTHO05D001572 1.9e-11 73.6 171 34.5
Psat3g114200 Pisum sativum HOM05D001646 ORTHO05D001572 4.3e-11 72.4 192 33.9
CANSAT54G1303 Cannabis sativa HOM05D001646 ORTHO05D001572 7.3e-11 71.6 180 32.2
Prupe.6G323200 Prunus persica HOM05D001646 ORTHO05D001572 9.6e-11 71.2 172 34.9
RcHm_v2.0_Chr3g0455281 Rosa chinensis HOM05D001646 ORTHO05D001572 9.6e-11 71.2 173 34.1
TWI56G0691 Tripterygium wilfordii HOM05D001646 ORTHO05D001572 9.6e-11 71.2 175 32.6
Dinv40306 Davidia involucrata HOM05D001646 ORTHO05D001572 1.3e-10 70.9 170 33.5
FAN05G5355 Fragaria x ananassa HOM05D001646 ORTHO05D001572 1.6e-10 70.5 171 33.9
Medtr7g113270 Medicago truncatula HOM05D001646 ORTHO05D001572 2.8e-10 69.7 213 33.3
Medtr7g113290 Medicago truncatula HOM05D001646 ORTHO05D001572 3.6e-10 69.3 61 63.9
Dinv30783 Davidia involucrata HOM05D001646 ORTHO05D001572 6.9e-09 65.1 169 30.8
Medtr1g041895 Medicago truncatula HOM05D001646 ORTHO05D001572 1.5e-08 63.9 238 29.8
Manes.08G119700 Manihot esculenta HOM05D001646 ORTHO05D001572 9.9e-08 61.2 179 30.2
TWI12G1306 Tripterygium wilfordii HOM05D001646 ORTHO05D001572 2.2e-07 60.1 87 40.2
Medtr7g112390 Medicago truncatula HOM05D001646 ORTHO05D001572 4.9e-07 58.9 331 27.5
FvH4_6g06260 Fragaria vesca HOM05D001646 ORTHO05D001572 6.4e-07 58.5 198 29.3
FAN14G3723 Fragaria x ananassa HOM05D001646 ORTHO05D001572 1.1e-06 57.8 198 29.3
CiPaw.08G163200 Carya illinoinensis HOM05D001646 ORTHO05D001572 3.2e-06 56.2 238 26.5
Thecc.05G310700 Theobroma cacao HOM05D001646 ORTHO05D001572 3.2e-06 56.2 178 27.5


User provided reference genes

Program Settings