Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G227801 Glycine max HOM05D006905 ORTHO05D003398 1.4e-72 276.2 134 100.0
Glyma.10G160600 Glycine max HOM05D006905 ORTHO05D003398 2.1e-49 199.1 115 87.8
Phvul.007G186100 Phaseolus vulgaris HOM05D006905 ORTHO05D003398 1.8e-45 186.0 112 81.2
VMungo0720G0828 Vigna mungo HOM05D006905 ORTHO05D003398 1.6e-44 183.0 112 79.5
Lj5g0004067 Lotus japonicus HOM05D006905 ORTHO05D003398 2.5e-42 175.6 122 76.2
arahy.Tifrunner.gnm1.ann1.PI1FXK Arachis hypogaea HOM05D006905 ORTHO05D003398 3.3e-42 175.3 116 75.9
arahy.Tifrunner.gnm1.ann1.N7GLTS Arachis hypogaea HOM05D006905 ORTHO05D003398 9.5e-42 173.7 115 76.5
TPR.G11158 Trifolium pratense HOM05D006905 ORTHO05D003398 1.2e-41 173.3 112 75.0
Lalb_Chr06g0167991 Lupinus albus HOM05D006905 ORTHO05D003398 2.0e-39 166.0 115 72.2
Medtr1g081280 Medicago truncatula HOM05D006905 ORTHO05D003398 3.2e-37 158.7 119 67.2
CANSAT54G0047 Cannabis sativa HOM05D006905 ORTHO05D003398 4.1e-37 158.3 113 69.9
Haze_04329 Corylus avellana HOM05D006905 ORTHO05D003398 4.1e-37 158.3 117 70.9
Cfa006463 Carpinus fangiana HOM05D006905 ORTHO05D003398 2.0e-36 156.0 117 69.2
Prupe.6G339800 Prunus persica HOM05D006905 ORTHO05D003398 7.8e-36 154.1 117 65.0
MD04G1220800 Malus domestica HOM05D006905 ORTHO05D003398 3.9e-35 151.8 117 63.2
Gohir.D08G246700 Gossypium hirsutum HOM05D006905 ORTHO05D003398 6.6e-35 151.0 116 62.9
Gorai.004G263200 Gossypium raimondii HOM05D006905 ORTHO05D003398 6.6e-35 151.0 116 62.9
Thecc.05G193600 Theobroma cacao HOM05D006905 ORTHO05D003398 6.6e-35 151.0 117 65.0
Duzib128G0775 Durio zibethinus HOM05D006905 ORTHO05D003398 8.6e-35 150.6 116 65.5
FAN09G1595 Fragaria x ananassa HOM05D006905 ORTHO05D003398 1.1e-34 150.2 111 64.9
Dinv11554 Davidia involucrata HOM05D006905 ORTHO05D003398 1.5e-34 149.8 114 64.9
RcHm_v2.0_Chr3g0451941 Rosa chinensis HOM05D006905 ORTHO05D003398 1.5e-34 149.8 118 64.4
COL.COLO4_38037 Corchorus olitorius HOM05D006905 ORTHO05D003398 2.5e-34 149.1 116 64.7
Aqoxy5G00478 Aquilegia oxysepala HOM05D006905 ORTHO05D003398 3.3e-34 148.7 112 64.3
QL03p024500 Quercus lobata HOM05D006905 ORTHO05D003398 4.3e-34 148.3 112 66.1
Nn4g26306 Nelumbo nucifera HOM05D006905 ORTHO05D003398 7.3e-34 147.5 111 64.0
CiPaw.07G006400 Carya illinoinensis HOM05D006905 ORTHO05D003398 1.6e-33 146.4 111 67.6
Potri.013G036500 Populus trichocarpa HOM05D006905 ORTHO05D003398 1.6e-33 146.4 114 64.9
FAN02G2898 Fragaria x ananassa HOM05D006905 ORTHO05D003398 2.1e-33 146.0 109 63.3
FAN05G2111 Fragaria x ananassa HOM05D006905 ORTHO05D003398 3.6e-33 145.2 113 63.7
FvH4_6g03440 Fragaria vesca HOM05D006905 ORTHO05D003398 6.2e-33 144.4 113 62.8
CSS0017923 Camellia sinensis var. sinensis HOM05D006905 ORTHO05D003398 8.0e-33 144.1 112 62.5
vmacro05070 Vaccinium macrocarpon HOM05D006905 ORTHO05D003398 1.0e-32 143.7 110 60.9
FAN14G2439 Fragaria x ananassa HOM05D006905 ORTHO05D003398 2.3e-32 142.5 113 62.8
MBI04_g20814_MAGBIO Magnolia biondii HOM05D006905 ORTHO05D003398 4.0e-32 141.7 115 60.0
Peaxi162Scf00404g00025 Petunia axillaris HOM05D006905 ORTHO05D003398 4.0e-32 141.7 117 60.7
Manes.09G156000 Manihot esculenta HOM05D006905 ORTHO05D003398 5.2e-32 141.4 114 63.2
Sed0006348 Sechium edule HOM05D006905 ORTHO05D003398 6.8e-32 141.0 116 61.2
GSVIVG01021847001 Vitis vinifera HOM05D006905 ORTHO05D003398 8.9e-32 140.6 115 61.7
Ciclev10002392m.g Citrus clementina HOM05D006905 ORTHO05D003398 2.0e-31 139.4 117 61.5
Nitab4.5_0002361g0060 Nicotiana tabacum HOM05D006905 ORTHO05D003398 2.0e-31 139.4 117 61.5
PGR083G0691 Punica granatum HOM05D006905 ORTHO05D003398 2.6e-31 139.0 114 59.6
SGA_v2.0_scaffold5G02928 Striga asiatica HOM05D006905 ORTHO05D003398 3.4e-31 138.7 123 58.5
TWI56G1496 Tripterygium wilfordii HOM05D006905 ORTHO05D003398 3.4e-31 138.7 112 62.5
EL10Ac4g09180 Beta vulgaris HOM05D006905 ORTHO05D003398 4.4e-31 138.3 115 57.4
CAN.G134.166 Capsicum annuum HOM05D006905 ORTHO05D003398 4.4e-31 138.3 114 62.3
Cpa.g.sc117.65 Carica papaya HOM05D006905 ORTHO05D003398 4.4e-31 138.3 116 62.1
Migut.N01907 Erythranthe guttata HOM05D006905 ORTHO05D003398 4.4e-31 138.3 116 58.6
PGR083G1281 Punica granatum HOM05D006905 ORTHO05D003398 4.4e-31 138.3 114 59.6
CsaV3_2G004310 Cucumis sativus L. HOM05D006905 ORTHO05D003398 5.8e-31 137.9 117 59.0
Nitab4.5_0013433g0040 Nicotiana tabacum HOM05D006905 ORTHO05D003398 5.8e-31 137.9 117 62.4
TAR636G1711 Trochodendron aralioides HOM05D006905 ORTHO05D003398 7.5e-31 137.5 110 61.8
MELO3C004363.2 Cucumis melo HOM05D006905 ORTHO05D003398 1.3e-30 136.7 117 59.0
HanXRQChr12g0384101 Helianthus annuus HOM05D006905 ORTHO05D003398 2.9e-30 135.6 117 60.7
Solyc01g097820.4 Solanum lycopersicum HOM05D006905 ORTHO05D003398 4.9e-30 134.8 115 61.7
Sopen01g041420 Solanum pennellii HOM05D006905 ORTHO05D003398 6.4e-30 134.4 115 61.7
Atru.chr2.731 Acer truncatum HOM05D006905 ORTHO05D003398 8.3e-30 134.0 114 57.0
Lsat_1_v5_gn_3_28040 Lactuca sativa HOM05D006905 ORTHO05D003398 8.3e-30 134.0 117 56.4
PGSC0003DMG400022508 Solanum tuberosum HOM05D006905 ORTHO05D003398 8.3e-30 134.0 114 60.5
Rhsim07G0175500 Rhododendron simsii HOM05D006905 ORTHO05D003398 1.4e-29 133.3 108 57.4
AL3G15180 Arabidopsis lyrata HOM05D006905 ORTHO05D003398 1.9e-29 132.9 117 58.1
ATR0737G167 Amborella trichopoda HOM05D006905 ORTHO05D003398 2.4e-29 132.5 116 56.0
Atru.chr2.743 Acer truncatum HOM05D006905 ORTHO05D003398 3.2e-29 132.1 114 56.1
Eucgr.B01715 Eucalyptus grandis HOM05D006905 ORTHO05D003398 4.1e-29 131.7 117 56.4
BolC5t34896H Brassica oleracea HOM05D006905 ORTHO05D003398 5.4e-29 131.3 119 57.1
Sp3g03710 Schrenkiella parvula HOM05D006905 ORTHO05D003398 5.4e-29 131.3 118 58.5
Aa31LG5G15280 Aethionema arabicum HOM05D006905 ORTHO05D003398 7.0e-29 131.0 117 54.7
ECA246G1419 Erigeron canadensis HOM05D006905 ORTHO05D003398 1.2e-28 130.2 116 55.2
Eucgr.L02187 Eucalyptus grandis HOM05D006905 ORTHO05D003398 1.6e-28 129.8 112 58.9
Carub.0003s0409 Capsella rubella HOM05D006905 ORTHO05D003398 7.8e-28 127.5 118 53.4
A05p42710 Brassica napus HOM05D006905 ORTHO05D003398 1.0e-27 127.1 119 55.5
BcaNung06537 Brassica carinata HOM05D006905 ORTHO05D003398 1.3e-27 126.7 121 52.9
C05p62430 Brassica napus HOM05D006905 ORTHO05D003398 1.3e-27 126.7 121 52.9
AT3G04890 Arabidopsis thaliana HOM05D006905 ORTHO05D003398 3.0e-27 125.6 117 54.7
Sc20g0000270 Simmondsia chinensis HOM05D006905 ORTHO05D003398 2.5e-26 122.5 110 53.6
CARHR079160 Cardamine hirsuta HOM05D006905 ORTHO05D003398 1.2e-25 120.2 118 50.8
Actinidia30925 Actinidia chinensis HOM05D006905 ORTHO05D003398 4.7e-25 118.2 116 52.6
BraA05t22982Z Brassica rapa HOM05D006905 ORTHO05D003398 4.7e-25 118.2 119 49.6
Psat6g147000 Pisum sativum HOM05D002360 ORTHO05D006297 8.1e-25 117.5 83 71.1
THA.LOC104802823 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 8.1e-25 117.5 116 52.6
Thhalv10021425m.g Eutrema salsugineum HOM05D006905 ORTHO05D003398 1.4e-24 116.7 113 53.1
unitig_8.g4913 Utricularia gibba HOM05D006905 ORTHO05D003398 5.2e-24 114.8 111 53.2
THA.LOC104802824 Tarenaya hassleriana HOM05D006905 ORTHO05D003398 3.4e-23 112.1 126 49.2
Gohir.A08G226300 Gossypium hirsutum HOM05D006905 ORTHO05D003398 1.3e-22 110.2 89 58.4
SEGI_10814 Sequoiadendron giganteum HOM05D006905 ORTHO05D003398 1.7e-22 109.8 114 45.6
SalBow8G0693 Salvia bowleyana HOM05D006905 ORTHO05D003398 1.4e-21 106.7 80 60.0
Mapoly0006s0024 Marchantia polymorpha HOM05D006905 ORTHO05D003398 4.1e-21 105.1 109 45.0
Pp3c24_12540 Physcomitrium patens HOM05D006905 ORTHO05D003398 6.0e-20 101.3 114 45.6
Hund22112 Selenicereus undatus HOM05D006905 ORTHO05D003398 6.0e-20 101.3 98 52.0
Sabra13G0035600 Salix brachista HOM05D006905 ORTHO05D003398 1.3e-19 100.1 126 50.0
FAN05G4190 Fragaria x ananassa HOM05D006905 ORTHO05D003398 3.3e-18 95.5 113 49.6
AagrBONN_evm.TU.Sc2ySwM_117.1949 Anthoceros agrestis HOM05D006905 ORTHO05D003398 7.3e-18 94.4 106 46.2
BcaC05g30566 Brassica carinata HOM05D006905 ORTHO05D003398 7.3e-18 94.4 68 63.2
AUR62000979 Chenopodium quinoa HOM05D006905 ORTHO05D003398 6.2e-17 91.3 111 45.9
Mapoly0178s0027 Marchantia polymorpha HOM05D006905 ORTHO05D003398 5.8e-15 84.7 69 50.7
Mapoly0016s0115 Marchantia polymorpha HOM05D006905 ORTHO05D003398 7.6e-15 84.3 68 51.5
Cc02_g31660 Coffea canephora HOM05D006905 ORTHO05D003398 3.7e-14 82.0 52 69.2
Mapoly0059s0020 Marchantia polymorpha HOM05D006905 ORTHO05D003398 6.4e-14 81.3 68 50.0
Potri.013G037050 Populus trichocarpa HOM05D006905 ORTHO05D003398 2.3e-11 72.8 77 50.6
Gohir.A01G104050 Gossypium hirsutum HOM05D006905 ORTHO05D003398 9.6e-10 67.4 67 49.3
Cre10.g464250 Chlamydomonas reinhardtii HOM05D006905 ORTHO05D003398 1.8e-08 63.2 64 43.8
ClCG02G016440 Citrullus lanatus HOM05D006905 ORTHO05D003398 1.5e-07 60.1 72 47.2
PGR042G3120 Punica granatum HOM05D007525 ORTHO05D003398 9.9e-07 57.4 105 37.1


User provided reference genes

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