Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.9e-175 619.4 381 100.0
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 6.2e-155 551.2 386 90.7
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 4.7e-102 375.6 400 64.8
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.0e-96 357.8 383 69.2
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 6.5e-96 355.1 366 68.9
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 1.0e-93 347.8 397 66.2
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 4.0e-93 345.9 417 60.0
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 8.8e-93 344.7 396 65.7
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 3.4e-92 342.8 403 61.3
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 3.7e-91 339.3 369 64.5
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 1.4e-77 294.3 291 64.6
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 4.9e-75 285.8 367 59.7
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 1.3e-72 277.7 282 58.2
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 3.9e-72 276.2 256 64.1
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 5.0e-72 275.8 371 56.3
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 8.6e-72 275.0 355 56.1
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 8.6e-72 275.0 325 62.8
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 8.6e-72 275.0 293 59.4
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 8.0e-70 268.5 372 57.0
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 1.0e-69 268.1 357 60.5
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 1.0e-69 268.1 330 59.4
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 1.8e-69 267.3 333 61.3
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 3.1e-69 266.5 262 60.3
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 5.2e-69 265.8 352 57.4
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.2e-68 264.6 394 52.3
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 2.0e-68 263.8 322 60.2
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 2.6e-68 263.5 351 57.0
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 3.4e-68 263.1 282 58.9
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 7.5e-68 261.9 376 54.0
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 9.8e-68 261.5 325 58.8
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 2.2e-67 260.4 377 53.3
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 2.9e-67 260.0 329 59.6
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 2.9e-67 260.0 278 62.6
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 6.4e-67 258.8 371 52.8
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 8.3e-67 258.5 326 58.0
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 8.3e-67 258.5 325 60.0
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 2.4e-66 256.9 288 55.6
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 3.2e-66 256.5 328 55.8
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 7.0e-66 255.4 340 57.6
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 9.2e-66 255.0 345 59.4
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 9.2e-66 255.0 329 59.0
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 9.2e-66 255.0 297 55.2
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 1.6e-65 254.2 272 52.2
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 7.8e-65 251.9 345 59.1
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 2.3e-64 250.4 346 59.2
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 3.9e-64 249.6 345 57.7
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 5.0e-64 249.2 292 54.5
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 5.0e-64 249.2 263 58.9
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 6.6e-64 248.8 277 52.3
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 6.6e-64 248.8 259 60.6
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.5e-63 247.7 262 58.0
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 1.9e-63 247.3 396 53.5
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.9e-63 247.3 263 58.6
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 1.6e-62 244.2 437 46.2
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 2.1e-62 243.8 323 54.5
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 2.1e-62 243.8 335 54.3
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 2.1e-62 243.8 238 66.8
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 1.8e-61 240.7 286 53.8
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 6.8e-61 238.8 276 53.6
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.2e-60 238.0 370 52.4
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.6e-60 236.9 270 54.1
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.6e-60 236.9 371 53.4
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 3.4e-60 236.5 352 57.4
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 1.7e-59 234.2 324 54.3
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 4.9e-59 232.6 292 55.5
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 8.3e-59 231.9 334 53.9
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 8.3e-59 231.9 334 53.9
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.1e-58 231.5 368 49.7
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 1.4e-58 231.1 277 53.8
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 1.9e-58 230.7 368 55.7
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 3.9e-56 223.0 275 50.5
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 3.9e-56 223.0 335 50.7
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 3.3e-55 219.9 378 47.9
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 3.3e-55 219.9 332 52.1
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 4.3e-55 219.5 329 46.8
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 5.6e-55 219.2 272 51.5
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 2.8e-54 216.9 292 47.9
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 2.8e-54 216.9 251 53.8
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 3.6e-54 216.5 334 50.6
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 6.2e-54 215.7 216 57.9
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 2.6e-52 210.3 276 52.9
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 5.8e-52 209.1 301 46.2
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 1.3e-51 208.0 266 50.4
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.2e-51 207.2 181 64.6
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 2.2e-51 207.2 261 49.8
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 3.7e-51 206.5 193 58.0
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 6.4e-51 205.7 318 44.3
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.1e-50 204.9 298 46.0
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.4e-50 204.5 361 49.3
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 2.4e-50 203.8 312 54.5
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 9.2e-50 201.8 189 58.7
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 1.6e-49 201.1 222 55.0
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 3.5e-49 199.9 236 50.0
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 3.5e-49 199.9 325 51.1
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 1.1e-47 194.9 264 47.0
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 3.6e-46 189.9 264 47.0
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 6.2e-46 189.1 165 63.0
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 6.2e-46 189.1 240 48.8
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 2.0e-44 184.1 177 61.6
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 4.4e-44 183.0 269 49.8
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.3e-43 181.4 203 47.8
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 1.7e-40 171.0 199 51.3
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 2.3e-40 170.6 389 42.4
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 4.0e-37 159.8 263 42.2
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 3.4e-36 156.8 227 42.3
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 5.8e-36 156.0 183 51.9
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 4.9e-35 152.9 207 42.0
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.1e-33 147.5 201 44.3
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 3.0e-32 143.7 210 39.0
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 3.9e-32 143.3 302 35.1
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 2.5e-31 140.6 159 52.8
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.4e-18 98.2 127 52.0
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.3e-16 90.9 54 85.2
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 9.0e-13 79.0 75 60.0
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 3.0e-08 63.9 239 28.9


User provided reference genes

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