Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G168700 Glycine max HOM05D004894 ORTHO05D005689 2.8e-100 368.6 189 100.0
Glyma.10G223000 Glycine max HOM05D004894 ORTHO05D005689 3.8e-81 305.1 190 84.7
Glyma.10G140100 Glycine max HOM05D004894 ORTHO05D005689 1.1e-35 154.1 188 51.1
Lj5g0011961 Lotus japonicus HOM05D004894 ORTHO05D005689 4.2e-35 152.1 186 47.8
VMungo0647G0768 Vigna mungo HOM05D004894 ORTHO05D005689 2.7e-34 149.4 190 45.8
Phvul.008G271200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 4.6e-34 148.7 190 44.7
Psat6g191960 Pisum sativum HOM05D004894 ORTHO05D005689 1.7e-33 146.7 185 48.6
Phvul.007G082100 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 2.3e-33 146.4 182 46.7
Phvul.007G082200 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 6.6e-33 144.8 190 45.8
Glyma.10G223100 Glycine max HOM05D004894 ORTHO05D005689 8.7e-33 144.4 175 53.1
Psat6g191520 Pisum sativum HOM05D004894 ORTHO05D005689 3.3e-32 142.5 185 48.6
VMungo0720G1196 Vigna mungo HOM05D004894 ORTHO05D005689 3.3e-32 142.5 182 47.8
Lalb_Chr03g0035461 Lupinus albus HOM05D004894 ORTHO05D005689 1.3e-31 140.6 180 51.7
Glyma.02G080000 Glycine max HOM05D004894 ORTHO05D005689 2.1e-31 139.8 185 47.0
Lj2g0017521 Lotus japonicus HOM05D004894 ORTHO05D005689 4.8e-31 138.7 187 44.9
Glyma.14G020600 Glycine max HOM05D004894 ORTHO05D005689 6.2e-31 138.3 187 47.1
VMungo0720G2185 Vigna mungo HOM05D004894 ORTHO05D005689 6.2e-31 138.3 180 45.0
Lalb_Chr19g0130151 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-30 137.1 181 47.5
Lalb_Chr19g0130161 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-30 137.1 181 47.5
Glyma.14G020900 Glycine max HOM05D004894 ORTHO05D005689 1.8e-30 136.7 186 46.8
Medtr1g098410 Medicago truncatula HOM05D004894 ORTHO05D005689 4.0e-30 135.6 188 47.9
Lalb_Chr03g0035451 Lupinus albus HOM05D004894 ORTHO05D005689 6.9e-30 134.8 149 47.0
Ca_10673_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 9.0e-30 134.4 189 47.1
Glyma.16G164600 Glycine max HOM05D004894 ORTHO05D005689 1.2e-29 134.0 187 44.4
Psat6g191360 Pisum sativum HOM05D004894 ORTHO05D005689 2.6e-29 132.9 185 44.9
TPR.G9011 Trifolium pratense HOM05D004894 ORTHO05D005689 2.6e-29 132.9 185 46.5
Psat6g191440 Pisum sativum HOM05D004894 ORTHO05D005689 5.8e-29 131.7 130 52.3
Lalb_Chr02g0141491 Lupinus albus HOM05D004894 ORTHO05D005689 7.6e-29 131.3 185 44.3
Medtr1g098200 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-28 130.6 185 46.5
Medtr1g098400 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-28 130.6 185 46.5
arahy.Tifrunner.gnm1.ann1.VH20NJ Arachis hypogaea HOM05D004894 ORTHO05D005689 2.2e-28 129.8 186 43.5
Medtr1g098430 Medicago truncatula HOM05D004894 ORTHO05D005689 3.8e-28 129.0 179 46.9
Lalb_Chr03g0035581 Lupinus albus HOM05D004894 ORTHO05D005689 1.1e-27 127.5 185 42.7
Psat1g100960 Pisum sativum HOM05D004894 ORTHO05D005689 1.1e-27 127.5 191 45.5
Psat7g222760 Pisum sativum HOM05D004894 ORTHO05D005689 2.4e-27 126.3 186 41.9
Medtr4g062290 Medicago truncatula HOM05D004894 ORTHO05D005689 3.2e-27 125.9 186 41.4
Medtr6g038010 Medicago truncatula HOM05D004894 ORTHO05D005689 2.1e-26 123.2 185 42.7
Lalb_Chr03g0035551 Lupinus albus HOM05D004894 ORTHO05D005689 7.9e-26 121.3 185 43.2
arahy.Tifrunner.gnm1.ann1.P5DTJP Arachis hypogaea HOM05D004894 ORTHO05D005689 1.8e-25 120.2 192 42.7
Lalb_Chr19g0130061 Lupinus albus HOM05D004894 ORTHO05D005689 5.1e-25 118.6 185 42.2
TPR.G12635 Trifolium pratense HOM05D004894 ORTHO05D005689 1.5e-24 117.1 188 41.0
Lalb_Chr14g0362611 Lupinus albus HOM05D004894 ORTHO05D005689 3.3e-24 115.9 183 38.3
Phvul.004G091800 Phaseolus vulgaris HOM05D004894 ORTHO05D005689 7.4e-24 114.8 181 43.1
Glyma.02G262700 Glycine max HOM05D004894 ORTHO05D005689 2.8e-23 112.8 179 42.5
Glyma.02G263100 Glycine max HOM05D004894 ORTHO05D005689 2.8e-23 112.8 179 42.5
arahy.Tifrunner.gnm1.ann1.56TCJ2 Arachis hypogaea HOM05D004894 ORTHO05D005689 3.7e-23 112.5 189 39.2
Glyma.02G262600 Glycine max HOM05D004894 ORTHO05D005689 4.8e-23 112.1 179 42.5
Glyma.02G262800 Glycine max HOM05D004894 ORTHO05D005689 4.8e-23 112.1 179 42.5
Glyma.02G262900 Glycine max HOM05D004894 ORTHO05D005689 4.8e-23 112.1 179 42.5
Glyma.02G263000 Glycine max HOM05D004894 ORTHO05D005689 4.8e-23 112.1 179 42.5
Lalb_Chr19g0130051 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-22 110.5 181 38.1
Lalb_Chr19g0130071 Lupinus albus HOM05D004894 ORTHO05D005689 1.4e-22 110.5 181 38.1
VMungo0464G0707 Vigna mungo HOM05D004894 ORTHO05D005689 1.8e-22 110.2 179 43.6
Lalb_Chr03g0035561 Lupinus albus HOM05D004894 ORTHO05D005689 6.9e-22 108.2 181 39.2
TPR.G17037 Trifolium pratense HOM05D004894 ORTHO05D005689 4.5e-21 105.5 116 49.1
Medtr4g065770 Medicago truncatula HOM05D004894 ORTHO05D005689 2.9e-20 102.8 190 36.8
Lalb_Chr03g0035571 Lupinus albus HOM05D004894 ORTHO05D005689 6.4e-20 101.7 185 38.4
Psat6g191480 Pisum sativum HOM05D004894 ORTHO05D005689 8.4e-20 101.3 103 53.4
Psat6g191560 Pisum sativum HOM05D004894 ORTHO05D005689 8.4e-20 101.3 103 52.4
Medtr6g037940 Medicago truncatula HOM05D004894 ORTHO05D005689 5.5e-19 98.6 147 36.7
QL02p038558 Quercus lobata HOM05D004894 ORTHO05D005689 7.1e-19 98.2 148 39.9
QL02p037589 Quercus lobata HOM05D004894 ORTHO05D005689 1.2e-18 97.4 171 37.4
QL02p037592 Quercus lobata HOM05D004894 ORTHO05D005689 2.7e-18 96.3 171 35.7
QL02p038562 Quercus lobata HOM05D004894 ORTHO05D005689 2.7e-18 96.3 171 35.7
Psat4g130720 Pisum sativum HOM05D004894 ORTHO05D005689 4.6e-18 95.5 149 36.2
TPR.G12614 Trifolium pratense HOM05D004894 ORTHO05D005689 4.6e-18 95.5 183 38.3
MD10G1032700 Malus domestica HOM05D004894 ORTHO05D005689 6.0e-18 95.1 148 37.8
TPR.G28007 Trifolium pratense HOM05D004894 ORTHO05D005689 7.9e-18 94.7 143 35.0
TPR.G36348 Trifolium pratense HOM05D004894 ORTHO05D005689 7.9e-18 94.7 150 34.7
CiPaw.16G009500 Carya illinoinensis HOM05D004894 ORTHO05D005689 1.8e-17 93.6 177 34.5
TPR.G12588 Trifolium pratense HOM05D000036 ORTHO05D005689 3.0e-17 92.8 141 39.7
MD10G1032600 Malus domestica HOM05D004894 ORTHO05D005689 5.1e-17 92.0 144 37.5
Prupe.8G038100 Prunus persica HOM05D004894 ORTHO05D005689 8.7e-17 91.3 180 35.0
Psat7g222800 Pisum sativum HOM05D004894 ORTHO05D005689 1.9e-16 90.1 104 49.0
TWI34G1211 Tripterygium wilfordii HOM05D004894 ORTHO05D005689 3.3e-16 89.4 186 32.3
Haze_17777 Corylus avellana HOM05D004894 ORTHO05D005689 4.3e-16 89.0 182 35.2
Psat0s6062g0040 Pisum sativum HOM05D004894 ORTHO05D005689 3.7e-15 85.9 188 33.0
RcHm_v2.0_Chr6g0274541 Rosa chinensis HOM05D004894 ORTHO05D009560 3.7e-15 85.9 150 35.3
FvH4_2g13220 Fragaria vesca HOM05D004894 ORTHO05D005689 8.2e-15 84.7 130 36.9
Psat3g039600 Pisum sativum HOM05D004894 ORTHO05D005689 8.2e-15 84.7 183 33.3
FAN24G3270 Fragaria x ananassa HOM05D004894 ORTHO05D005689 1.1e-14 84.3 130 36.9
Medtr6g037920 Medicago truncatula HOM05D004894 ORTHO05D005689 1.1e-14 84.3 142 35.9
Cfa018298 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.4e-14 84.0 182 33.5
Medtr3g060470 Medicago truncatula HOM05D004894 ORTHO05D005689 1.8e-14 83.6 178 38.2
Medtr3g060520 Medicago truncatula HOM05D004894 ORTHO05D005689 1.8e-14 83.6 178 38.2
Medtr3g060570 Medicago truncatula HOM05D004894 ORTHO05D005689 1.8e-14 83.6 178 38.2
Haze_17792 Corylus avellana HOM05D004894 ORTHO05D005689 9.0e-14 81.3 182 33.0
Medtr6g037780 Medicago truncatula HOM05D004894 ORTHO05D005689 2.6e-13 79.7 152 32.9
Psat1g101000 Pisum sativum HOM05D004894 ORTHO05D005689 3.4e-13 79.3 149 32.2
TPR.G28009 Trifolium pratense HOM05D004894 ORTHO05D005689 5.8e-13 78.6 148 35.1
Medtr6g037700 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-12 77.4 182 33.5
MD10G1032400 Malus domestica HOM05D004894 ORTHO05D005689 2.2e-12 76.6 125 36.0
TPR.G14508 Trifolium pratense HOM05D004894 ORTHO05D005689 2.9e-12 76.3 191 30.4
TPR.G36461 Trifolium pratense HOM05D004894 ORTHO05D005689 6.5e-12 75.1 125 35.2
Atru.chr13.2013 Acer truncatum HOM05D004894 ORTHO05D005689 1.1e-11 74.3 152 32.9
Duzib041G0061 Durio zibethinus HOM05D007679 ORTHO05D009560 1.4e-11 73.9 135 35.6
TPR.G36349 Trifolium pratense HOM05D004894 ORTHO05D005689 1.9e-11 73.6 150 31.3
Lalb_Chr03g0035431 Lupinus albus HOM05D004894 ORTHO05D005689 2.5e-11 73.2 193 33.7
Ciclev10003770m.g Citrus clementina HOM05D004894 ORTHO05D005689 3.2e-11 72.8 169 28.4
Medtr6g037680 Medicago truncatula HOM05D004894 ORTHO05D005689 2.1e-10 70.1 189 32.8
Thecc.08G156900 Theobroma cacao HOM05D007679 ORTHO05D009560 2.7e-10 69.7 135 34.8
Ca_26810_v3 Cicer arietinum L. HOM05D004894 ORTHO05D005689 4.6e-10 68.9 109 39.4
Lalb_Chr03g0035421 Lupinus albus HOM05D004894 ORTHO05D005689 4.6e-10 68.9 189 33.9
Sabra13G0011900 Salix brachista HOM05D004894 ORTHO05D009560 6.1e-10 68.6 189 29.1
TPR.G21506 Trifolium pratense HOM05D004894 ORTHO05D005689 6.1e-10 68.6 197 29.4
TPR.G36147 Trifolium pratense HOM05D004894 ORTHO05D005689 6.1e-10 68.6 198 29.8
CiPaw.15G014000 Carya illinoinensis HOM05D004894 ORTHO05D005689 7.9e-10 68.2 149 29.5
TPR.G30777 Trifolium pratense HOM05D004894 ORTHO05D005689 1.0e-09 67.8 145 35.2
Medtr5g081840 Medicago truncatula HOM05D004894 ORTHO05D005689 3.0e-09 66.2 186 32.3
Medtr6g037710 Medicago truncatula HOM05D004894 ORTHO05D005689 3.0e-09 66.2 183 32.8
Haze_17791 Corylus avellana HOM05D004894 ORTHO05D009560 5.1e-09 65.5 135 31.9
Psat1g101040 Pisum sativum HOM05D004894 ORTHO05D005689 5.1e-09 65.5 184 30.4
Medtr6g037800 Medicago truncatula HOM05D004894 ORTHO05D005689 8.7e-09 64.7 139 34.5
Cfa018299 Carpinus fangiana HOM05D004894 ORTHO05D005689 1.9e-08 63.5 169 32.0
FAN20G3174 Fragaria x ananassa HOM05D004894 ORTHO05D005689 2.5e-08 63.2 139 30.9
TPR.G11233 Trifolium pratense HOM05D004894 ORTHO05D005689 5.7e-08 62.0 190 29.5
Lalb_Chr15g0089571 Lupinus albus HOM05D004894 ORTHO05D005689 1.3e-07 60.8 193 29.0
Medtr6g037820 Medicago truncatula HOM05D004894 ORTHO05D005689 1.3e-07 60.8 132 34.8
Cfa018297 Carpinus fangiana HOM05D004894 ORTHO05D005689 4.8e-07 58.9 136 34.6
Ciclev10003123m.g Citrus clementina HOM05D004894 ORTHO05D005689 8.2e-07 58.2 156 28.2
Medtr6g034800 Medicago truncatula HOM05D004894 ORTHO05D005689 8.2e-07 58.2 149 32.9
SHI09078 Sapria himalayana HOM05D004894 ORTHO05D005689 1.1e-06 57.8 149 28.2
THA.LOC104799810 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 1.1e-06 57.8 176 27.8
CSS0042410 Camellia sinensis var. sinensis HOM05D007679 ORTHO05D009560 2.4e-06 56.6 129 31.8
Glyma.05G160400 Glycine max HOM05D004894 ORTHO05D005689 3.1e-06 56.2 90 42.2
SalBow3G0814 Salvia bowleyana HOM05D011489 ORTHO05D014472 4.1e-06 55.8 153 28.8
Aa31sc47G40 Aethionema arabicum HOM05D007751 ORTHO05D009813 5.3e-06 55.5 109 35.8
Cpa.g.sc49.90 Carica papaya HOM05D007679 ORTHO05D009560 5.3e-06 55.5 149 32.9
Medtr6g039260 Medicago truncatula HOM05D004894 ORTHO05D005689 5.3e-06 55.5 149 31.5
THA.LOC104800050 Tarenaya hassleriana HOM05D007751 ORTHO05D009813 9.0e-06 54.7 151 28.5


User provided reference genes

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