Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G157100 Glycine max HOM05D006363 ORTHO05D007920 9.5e-110 400.2 205 100.0
Glyma.10G237500 Glycine max HOM05D006363 ORTHO05D007920 2.8e-101 372.1 206 94.2
VMungo0720G1872 Vigna mungo HOM05D006363 ORTHO05D007920 7.6e-99 364.0 207 91.3
Phvul.007G068100 Phaseolus vulgaris HOM05D006363 ORTHO05D007920 6.0e-96 354.4 194 92.3
LjContig00238g0019616 Lotus japonicus HOM05D006363 ORTHO05D007920 1.5e-91 339.7 207 86.5
Ca_10782_v3 Cicer arietinum L. HOM05D006363 ORTHO05D007920 2.2e-90 335.9 196 87.8
TPR.G14326 Trifolium pratense HOM05D006363 ORTHO05D007920 4.2e-89 331.6 203 85.2
QL09p014582 Quercus lobata HOM05D006363 ORTHO05D007920 2.7e-88 328.9 195 85.1
Cfa008303 Carpinus fangiana HOM05D006363 ORTHO05D007920 6.0e-88 327.8 200 81.5
Psat6g200600 Pisum sativum HOM05D006363 ORTHO05D007920 6.0e-88 327.8 196 84.7
Medtr1g100753 Medicago truncatula HOM05D006363 ORTHO05D007920 5.1e-87 324.7 204 81.4
Haze_13734 Corylus avellana HOM05D006363 ORTHO05D007920 7.3e-86 320.9 200 80.5
Ciclev10007013m.g Citrus clementina HOM05D006363 ORTHO05D007920 1.5e-83 313.2 205 77.1
CiPaw.03G104700 Carya illinoinensis HOM05D006363 ORTHO05D007920 2.0e-83 312.8 195 81.0
Cpa.g.sc107.33 Carica papaya HOM05D006363 ORTHO05D007920 2.6e-83 312.4 199 77.4
Lalb_Chr02g0140961 Lupinus albus HOM05D006363 ORTHO05D007920 2.6e-83 312.4 202 77.7
MD01G1199000 Malus domestica HOM05D006363 ORTHO05D007920 2.6e-83 312.4 198 80.3
Thecc.03G174500 Theobroma cacao HOM05D006363 ORTHO05D007920 5.8e-83 311.2 196 82.7
TWI39G0139 Tripterygium wilfordii HOM05D006363 ORTHO05D007920 2.9e-82 308.9 202 74.8
Sabra15G0151200 Salix brachista HOM05D006363 ORTHO05D007920 4.9e-82 308.1 196 78.1
FAN06G3284 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.9e-81 306.2 197 79.7
FAN06G3928 Fragaria x ananassa HOM05D006363 ORTHO05D007920 1.9e-81 306.2 197 79.7
FvH4_7g29240 Fragaria vesca HOM05D006363 ORTHO05D007920 2.4e-81 305.8 197 79.7
Gohir.A12G258900 Gossypium hirsutum HOM05D006363 ORTHO05D007920 3.2e-81 305.4 196 81.1
Duzib205G1779 Durio zibethinus HOM05D006363 ORTHO05D007920 4.2e-81 305.1 196 80.1
RcHm_v2.0_Chr1g0376991 Rosa chinensis HOM05D006363 ORTHO05D007920 4.2e-81 305.1 200 78.5
Gorai.008G278600 Gossypium raimondii HOM05D006363 ORTHO05D007920 7.1e-81 304.3 196 80.6
FAN10G0438 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.3e-81 303.9 197 78.7
Manes.07G111200 Manihot esculenta HOM05D006363 ORTHO05D007920 9.3e-81 303.9 195 77.4
MD07G1266800 Malus domestica HOM05D006363 ORTHO05D007920 3.5e-80 302.0 198 78.3
Prupe.2G292400 Prunus persica HOM05D006363 ORTHO05D007920 3.5e-80 302.0 200 77.5
FAN03G1027 Fragaria x ananassa HOM05D006363 ORTHO05D007920 4.6e-80 301.6 197 79.7
Gohir.D12G260100 Gossypium hirsutum HOM05D006363 ORTHO05D007920 4.6e-80 301.6 196 80.1
COL.COLO4_14288 Corchorus olitorius HOM05D006363 ORTHO05D007920 6.0e-80 301.2 196 80.1
THA.LOC104811988 Tarenaya hassleriana HOM05D006363 ORTHO05D007920 6.0e-80 301.2 205 74.6
PGR042G3170 Punica granatum HOM05D006363 ORTHO05D007920 1.0e-79 300.4 198 76.8
Potri.015G140600 Populus trichocarpa HOM05D006363 ORTHO05D007920 5.1e-79 298.1 198 75.8
MELO3C006895.2 Cucumis melo HOM05D006363 ORTHO05D007920 1.5e-78 296.6 196 76.0
CsaV3_3G016980 Cucumis sativus L. HOM05D006363 ORTHO05D007920 1.9e-78 296.2 196 75.5
CARHR265110 Cardamine hirsuta HOM05D006363 ORTHO05D007920 3.6e-77 292.0 199 73.9
Thhalv10015742m.g Eutrema salsugineum HOM05D006363 ORTHO05D007920 3.6e-77 292.0 198 73.2
FAN03G1282 Fragaria x ananassa HOM05D006363 ORTHO05D007920 8.1e-77 290.8 197 78.2
Atru.chr1.482 Acer truncatum HOM05D006363 ORTHO05D007920 1.8e-76 289.7 197 74.6
BraA03t10870Z Brassica rapa HOM05D006363 ORTHO05D007920 1.8e-76 289.7 205 70.7
Carub.0008s1228 Capsella rubella HOM05D006363 ORTHO05D007920 3.1e-76 288.9 206 70.9
BcaB01g04190 Brassica carinata HOM05D006363 ORTHO05D007920 1.2e-75 287.0 205 70.7
AL8G26570 Arabidopsis lyrata HOM05D006363 ORTHO05D007920 2.6e-75 285.8 200 71.5
BcaC01g06171 Brassica carinata HOM05D006363 ORTHO05D007920 1.3e-74 283.5 205 69.8
BolC3t14244H Brassica oleracea HOM05D006363 ORTHO05D007920 1.3e-74 283.5 205 69.8
Aa31LG3G8570 Aethionema arabicum HOM05D006363 ORTHO05D007920 2.9e-74 282.3 196 73.0
C03p18470 Brassica napus HOM05D006363 ORTHO05D007920 8.4e-74 280.8 205 69.3
Sed0019375 Sechium edule HOM05D006363 ORTHO05D007920 1.4e-73 280.0 198 73.7
AT5G52190 Arabidopsis thaliana HOM05D006363 ORTHO05D007920 3.2e-73 278.9 209 68.4
vmacro09843 Vaccinium macrocarpon HOM05D006363 ORTHO05D007920 4.2e-73 278.5 196 73.5
Sp6g14440 Schrenkiella parvula HOM05D006363 ORTHO05D007920 5.5e-73 278.1 207 70.0
CANSAT21G2254 Cannabis sativa HOM05D006363 ORTHO05D007920 2.1e-72 276.2 202 71.8
CANSAT21G0627 Cannabis sativa HOM05D006363 ORTHO05D007920 3.5e-72 275.4 202 72.8
AUR62021214 Chenopodium quinoa HOM05D006363 ORTHO05D007920 4.6e-72 275.0 199 70.9
AUR62016007 Chenopodium quinoa HOM05D006363 ORTHO05D007920 1.8e-71 273.1 194 72.2
Rhsim09G0197500 Rhododendron simsii HOM05D006363 ORTHO05D007920 3.0e-71 272.3 196 71.4
EL10Ac3g05667 Beta vulgaris HOM05D006363 ORTHO05D007920 5.1e-71 271.6 195 71.3
CSS0028509 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.1e-70 270.4 205 67.8
Dinv28459 Davidia involucrata HOM05D006363 ORTHO05D007920 2.5e-70 269.2 205 66.8
Peaxi162Scf00915g00018 Petunia axillaris HOM05D006363 ORTHO05D007920 4.3e-70 268.5 205 69.3
Eucgr.A02801 Eucalyptus grandis HOM05D006363 ORTHO05D007920 5.6e-70 268.1 200 70.0
CSS0002932 Camellia sinensis var. sinensis HOM05D006363 ORTHO05D007920 1.6e-69 266.5 205 67.8
Cc03_g13850 Coffea canephora HOM05D006363 ORTHO05D007920 4.8e-69 265.0 196 67.9
Lsat_1_v5_gn_2_133820 Lactuca sativa HOM05D006363 ORTHO05D007920 4.8e-69 265.0 196 66.8
Oeu062762.2 Olea europaea HOM05D006363 ORTHO05D007920 4.8e-69 265.0 196 68.9
PGSC0003DMG400014325 Solanum tuberosum HOM05D006363 ORTHO05D007920 1.1e-68 263.8 205 67.8
Lj8C25T12 Lonicera japonica HOM05D006363 ORTHO05D007920 1.8e-68 263.1 197 69.5
Solyc03g025990.1 Solanum lycopersicum HOM05D006363 ORTHO05D007920 2.4e-68 262.7 202 68.3
Sopen03g004810 Solanum pennellii HOM05D006363 ORTHO05D007920 5.3e-68 261.5 202 67.8
Migut.F01133 Erythranthe guttata HOM05D006363 ORTHO05D007920 6.9e-68 261.2 199 65.8
HanXRQChr14g0462221 Helianthus annuus HOM05D006363 ORTHO05D007920 9.0e-68 260.8 205 66.8
MSTRG.8448 Avicennia marina HOM05D006363 ORTHO05D007920 1.5e-67 260.0 205 66.8
ECA238G0548 Erigeron canadensis HOM05D006363 ORTHO05D007920 2.0e-67 259.6 200 67.5
Nitab4.5_0001508g0030 Nicotiana tabacum HOM05D006363 ORTHO05D007920 2.0e-67 259.6 207 66.7
GSVIVG01010552001 Vitis vinifera HOM05D006363 ORTHO05D007920 2.5e-65 252.7 203 65.5
Nn6g34197 Nelumbo nucifera HOM05D006363 ORTHO05D007920 5.5e-65 251.5 199 66.3
Nitab4.5_0000716g0210 Nicotiana tabacum HOM05D006363 ORTHO05D007920 5.5e-65 251.5 205 65.4
Ah.13g075440 Amaranthus hybridus HOM05D006363 ORTHO05D007920 2.1e-64 249.6 185 70.3
Aqoxy7G00395 Aquilegia oxysepala HOM05D006363 ORTHO05D007920 1.0e-63 247.3 209 62.7
PSO782G5704 Papaver somniferum HOM05D006363 ORTHO05D007920 2.3e-63 246.1 220 59.1
DCAR_018188 Daucus carota HOM05D006363 ORTHO05D007920 5.1e-63 245.0 196 62.8
unitig_60.g25545 Utricularia gibba HOM05D006363 ORTHO05D007920 1.6e-61 240.0 198 64.1
CAN.G947.11 Capsicum annuum HOM05D006363 ORTHO05D007920 2.4e-60 236.1 200 63.0
PSO478G1739 Papaver somniferum HOM05D006363 ORTHO05D007920 2.4e-60 236.1 219 58.0
MBI04_g04731_MAGBIO Magnolia biondii HOM05D006363 ORTHO05D007920 1.7e-58 229.9 210 58.6
TAR375G0304 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.2e-57 225.3 189 63.5
FAN01G1422 Fragaria x ananassa HOM05D006363 ORTHO05D007920 9.3e-57 224.2 196 61.2
A03p15800 Brassica napus HOM05D006363 ORTHO05D007920 1.9e-54 216.5 143 76.2
CDE04G1845 Ceratophyllum demersum HOM05D006363 ORTHO05D007920 3.3e-54 215.7 189 61.9
HPP92_021110 Vanilla planifolia HOM05D006363 ORTHO05D007920 4.3e-54 215.3 183 62.8
Zm00001eb428810 Zea mays HOM05D006363 ORTHO05D007920 6.3e-53 211.5 199 57.8
Os04g0568600 Oryza sativa ssp. japonica HOM05D006363 ORTHO05D007920 2.4e-52 209.5 191 58.1
ATR0757G111 Amborella trichopoda HOM05D006363 ORTHO05D007920 6.5e-50 201.4 199 53.3
Sc25g0000440 Simmondsia chinensis HOM05D006363 ORTHO05D007920 9.1e-44 181.0 147 65.3
SEGI_31787 Sequoiadendron giganteum HOM05D006363 ORTHO05D007920 1.4e-41 173.7 196 50.5
SalBow2G2214 Salvia bowleyana HOM05D006363 ORTHO05D007920 2.5e-41 172.9 154 60.4
Pp3c6_24270 Physcomitrium patens HOM05D006363 ORTHO05D007920 3.2e-41 172.6 208 46.6
A08p37210 Brassica napus HOM05D006363 ORTHO05D007920 1.8e-39 166.8 129 67.4
SMO367G0077 Selaginella moellendorffii HOM05D006363 ORTHO05D007920 2.6e-38 162.9 170 55.3
BcaC01g06168 Brassica carinata HOM05D006363 ORTHO05D007920 1.2e-27 127.5 100 64.0
BcaC06g36545 Brassica carinata HOM05D006363 ORTHO05D007920 1.0e-23 114.4 95 61.1
Mapoly0047s0087 Marchantia polymorpha HOM05D006363 ORTHO05D007920 9.8e-22 107.8 103 58.3
TPR.G33086 Trifolium pratense HOM05D006363 ORTHO05D007920 1.7e-21 107.1 60 93.3
Pp3c17_12800 Physcomitrium patens HOM05D006363 ORTHO05D007920 1.7e-18 97.1 308 27.3
BolC5t32613H Brassica oleracea HOM05D006363 ORTHO05D007920 1.9e-17 93.6 66 69.7
C05p38730 Brassica napus HOM05D006363 ORTHO05D007920 7.2e-17 91.7 66 68.2
BcaC01g06167 Brassica carinata HOM05D006363 ORTHO05D007920 6.1e-16 88.6 50 84.0
TAR633G0106 Trochodendron aralioides HOM05D006363 ORTHO05D007920 6.8e-15 85.1 72 59.7
Actinidia03116 Actinidia chinensis HOM05D006363 ORTHO05D007920 2.6e-14 83.2 102 51.0
TAR291G0005 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.2e-13 80.1 71 59.2
TAR375G0495 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.2e-13 80.1 71 59.2
TAR624G1193 Trochodendron aralioides HOM05D006363 ORTHO05D007920 2.2e-13 80.1 71 59.2
TAR614G0003 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.9e-13 79.0 71 59.2
TAR633G1276 Trochodendron aralioides HOM05D006363 ORTHO05D007920 4.9e-13 79.0 71 59.2
TAR383G0849 Trochodendron aralioides HOM05D003653 ORTHO05D004249 1.4e-12 77.4 71 57.7
TAR629G0450 Trochodendron aralioides HOM05D006363 ORTHO05D007920 1.8e-12 77.0 71 57.7
BcaC05g27871 Brassica carinata HOM05D006363 ORTHO05D007920 4.3e-09 65.9 103 43.7
A01p23910 Brassica napus HOM05D006363 ORTHO05D007920 3.6e-08 62.8 49 65.3
BraA01t02298Z Brassica rapa HOM05D006363 ORTHO05D007920 3.6e-08 62.8 49 65.3


User provided reference genes

Program Settings