Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G156900 Glycine max HOM05D006594 ORTHO05D008383 3.5e-261 904.4 461 100.0
Glyma.10G237700 Glycine max HOM05D006594 ORTHO05D008383 3.2e-238 828.2 464 91.8
Phvul.007G067900 Phaseolus vulgaris HOM05D006594 ORTHO05D008383 1.0e-215 753.4 462 84.6
Ca_10784_v3 Cicer arietinum L. HOM05D006594 ORTHO05D008383 1.0e-196 690.3 467 76.7
LjContig00238g0014067 Lotus japonicus HOM05D006594 ORTHO05D008383 2.2e-191 672.5 463 75.4
Psat6g200680 Pisum sativum HOM05D006594 ORTHO05D008383 2.6e-187 659.1 461 74.8
Medtr1g100767 Medicago truncatula HOM05D006594 ORTHO05D008383 1.6e-184 649.8 467 73.0
Lalb_Chr06g0161051 Lupinus albus HOM05D006594 ORTHO05D008383 2.0e-171 606.3 470 70.4
TPR.G14337 Trifolium pratense HOM05D006594 ORTHO05D008383 3.4e-155 552.4 449 65.9
Cfa008301 Carpinus fangiana HOM05D006594 ORTHO05D008383 1.7e-146 523.5 472 61.0
arahy.Tifrunner.gnm1.ann1.GIF0V2 Arachis hypogaea HOM05D006594 ORTHO05D008383 9.2e-145 517.7 402 67.7
arahy.Tifrunner.gnm1.ann1.MGJ2V1 Arachis hypogaea HOM05D006594 ORTHO05D008383 4.6e-144 515.4 401 67.6
CiPaw.03G104400 Carya illinoinensis HOM05D006594 ORTHO05D008383 3.7e-138 495.7 472 60.2
Prupe.2G292200 Prunus persica HOM05D006594 ORTHO05D008383 3.3e-134 482.6 464 57.8
QL09p014600 Quercus lobata HOM05D006594 ORTHO05D008383 1.2e-133 480.7 473 57.9
MD07G1266600 Malus domestica HOM05D006594 ORTHO05D008383 1.6e-133 480.3 465 57.0
Duzib205G1849 Durio zibethinus HOM05D006594 ORTHO05D008383 1.2e-131 474.2 468 55.6
Ciclev10004900m.g Citrus clementina HOM05D006594 ORTHO05D008383 2.2e-130 469.9 466 55.2
COL.COLO4_14285 Corchorus olitorius HOM05D006594 ORTHO05D008383 3.8e-130 469.2 459 55.3
RcHm_v2.0_Chr1g0376971 Rosa chinensis HOM05D006594 ORTHO05D008383 2.3e-127 459.9 464 57.1
Manes.14G027600 Manihot esculenta HOM05D006594 ORTHO05D008383 5.6e-126 455.3 475 53.5
Haze_13736 Corylus avellana HOM05D006594 ORTHO05D008383 1.6e-125 453.8 470 55.3
Potri.015G140900 Populus trichocarpa HOM05D006594 ORTHO05D008383 4.7e-125 452.2 476 54.4
CSS0002088 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 5.4e-121 438.7 470 53.6
Sabra15G0151500 Salix brachista HOM05D006594 ORTHO05D008383 9.3e-121 438.0 471 52.7
CSS0024482 Camellia sinensis var. sinensis HOM05D006594 ORTHO05D008383 2.7e-120 436.4 470 53.4
CsaV3_3G016960 Cucumis sativus L. HOM05D006594 ORTHO05D008383 6.0e-120 435.3 472 51.1
TWI23G0502 Tripterygium wilfordii HOM05D006594 ORTHO05D008383 6.0e-120 435.3 473 52.4
FAN10G1161 Fragaria x ananassa HOM05D006594 ORTHO05D008383 1.3e-119 434.1 468 54.1
FAN06G4553 Fragaria x ananassa HOM05D006594 ORTHO05D008383 8.7e-119 431.4 470 54.0
MELO3C006892.2 Cucumis melo HOM05D006594 ORTHO05D008383 1.9e-118 430.3 471 50.5
PGR142G0281 Punica granatum HOM05D006594 ORTHO05D008383 3.3e-118 429.5 466 52.8
FAN06G0009 Fragaria x ananassa HOM05D006594 ORTHO05D008383 7.3e-118 428.3 474 53.8
ClCG05G007930 Citrullus lanatus HOM05D006594 ORTHO05D008383 1.8e-116 423.7 468 49.8
Eucgr.K00239 Eucalyptus grandis HOM05D006594 ORTHO05D008383 3.1e-116 422.9 480 50.2
FAN01G0792 Fragaria x ananassa HOM05D006594 ORTHO05D008383 9.0e-116 421.4 461 53.8
Hma1.2p1_1323F.1_g275590 Hydrangea macrophylla HOM05D006594 ORTHO05D008383 9.0e-116 421.4 462 52.4
CARHR265100 Cardamine hirsuta HOM05D006594 ORTHO05D008383 2.6e-115 419.9 463 49.9
Cc02_g03190 Coffea canephora HOM05D006594 ORTHO05D008383 9.9e-115 417.9 473 50.7
Migut.F01134 Erythranthe guttata HOM05D006594 ORTHO05D008383 1.7e-114 417.2 471 50.1
Gohir.D12G260500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 2.2e-114 416.8 470 49.8
Sp6g14430 Schrenkiella parvula HOM05D006594 ORTHO05D008383 6.4e-114 415.2 463 49.7
Gorai.008G279100 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.9e-113 413.7 468 49.8
Actinidia32874 Actinidia chinensis HOM05D006594 ORTHO05D008383 9.3e-113 411.4 400 56.0
Lsat_1_v5_gn_0_29900 Lactuca sativa HOM05D006594 ORTHO05D008383 9.3e-113 411.4 464 49.8
SGA_v2.0_scaffold113G31757 Striga asiatica HOM05D006594 ORTHO05D008383 1.6e-112 410.6 457 49.7
DCAR_009355 Daucus carota HOM05D006594 ORTHO05D008383 2.1e-112 410.2 459 50.3
Sc19g0001600 Simmondsia chinensis HOM05D006594 ORTHO05D008383 2.1e-112 410.2 467 48.6
Oeu022583.1 Olea europaea HOM05D006594 ORTHO05D008383 6.0e-112 408.7 466 50.0
Peaxi162Scf00915g00007 Petunia axillaris HOM05D006594 ORTHO05D008383 6.0e-112 408.7 463 49.9
Aa31LG3G8560 Aethionema arabicum HOM05D006594 ORTHO05D008383 1.3e-111 407.5 463 49.7
BcaB08g35566 Brassica carinata HOM05D006594 ORTHO05D008383 1.3e-111 407.5 464 50.0
Thhalv10013484m.g Eutrema salsugineum HOM05D006594 ORTHO05D008383 1.3e-111 407.5 467 49.5
PSO782G0556 Papaver somniferum HOM05D006594 ORTHO05D008383 8.7e-111 404.8 470 50.6
vmacro06700 Vaccinium macrocarpon HOM05D006594 ORTHO05D008383 1.1e-110 404.4 400 56.2
AT5G52180 Arabidopsis thaliana HOM05D006594 ORTHO05D008383 1.5e-110 404.1 466 49.6
Aqoxy7G00398 Aquilegia oxysepala HOM05D006594 ORTHO05D008383 7.4e-110 401.7 467 48.6
Sed0005391 Sechium edule HOM05D006594 ORTHO05D008383 7.4e-110 401.7 412 51.9
THA.LOC104825095 Tarenaya hassleriana HOM05D006594 ORTHO05D008383 9.6e-110 401.4 465 49.0
FAN03G3172 Fragaria x ananassa HOM05D006594 ORTHO05D008383 3.6e-109 399.4 434 54.4
HanXRQChr09g0253731 Helianthus annuus HOM05D006594 ORTHO05D008383 4.8e-109 399.1 460 49.6
Carub.0008s1227 Capsella rubella HOM05D006594 ORTHO05D008383 6.2e-109 398.7 464 49.4
AL8G26560 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 8.1e-109 398.3 463 49.2
BcaC04g20605 Brassica carinata HOM05D006594 ORTHO05D008383 1.8e-108 397.1 463 49.2
C09p41600 Brassica napus HOM05D006594 ORTHO05D008383 1.8e-108 397.1 463 49.2
BolC9t57044H Brassica oleracea HOM05D006594 ORTHO05D008383 1.8e-108 397.1 463 49.2
BraA10t43068Z Brassica rapa HOM05D006594 ORTHO05D008383 9.0e-108 394.8 463 49.0
Rhsim03G0179000 Rhododendron simsii HOM05D006594 ORTHO05D008383 1.2e-107 394.4 406 54.2
A10p09870 Brassica napus HOM05D006594 ORTHO05D008383 1.5e-107 394.0 463 49.0
MSTRG.8446 Avicennia marina HOM05D006594 ORTHO05D008383 3.4e-107 392.9 471 48.0
Manes.06G145800 Manihot esculenta HOM05D006594 ORTHO05D008383 3.8e-106 389.4 475 47.8
PGSC0003DMG400014324 Solanum tuberosum HOM05D006594 ORTHO05D008383 1.6e-104 384.0 464 47.8
PSO478G3258 Papaver somniferum HOM05D006594 ORTHO05D008383 6.0e-104 382.1 438 50.7
CAN.G856.1 Capsicum annuum HOM05D006594 ORTHO05D008383 7.9e-104 381.7 464 48.1
GSVIVG01010594001 Vitis vinifera HOM05D006594 ORTHO05D008383 1.8e-103 380.6 453 48.6
Sopen03g004840 Solanum pennellii HOM05D006594 ORTHO05D008383 2.3e-103 380.2 467 47.3
Solyc03g026010.3 Solanum lycopersicum HOM05D006594 ORTHO05D008383 3.0e-103 379.8 467 47.5
TAR374G1009 Trochodendron aralioides HOM05D006594 ORTHO05D008383 1.4e-100 370.9 364 57.4
SalBow2G3298 Salvia bowleyana HOM05D006594 ORTHO05D008383 2.4e-100 370.2 458 45.4
CDE11G0822 Ceratophyllum demersum HOM05D006594 ORTHO05D008383 9.0e-100 368.2 464 44.6
Dinv28461 Davidia involucrata HOM05D006594 ORTHO05D008383 2.5e-97 360.1 428 49.5
MBI12_g14429_MAGBIO Magnolia biondii HOM05D006594 ORTHO05D008383 7.1e-97 358.6 404 51.7
AUR62021215 Chenopodium quinoa HOM05D006594 ORTHO05D008383 4.6e-96 355.9 408 48.0
Ah.13g068460 Amaranthus hybridus HOM05D006594 ORTHO05D008383 7.6e-91 338.6 468 42.7
Gohir.A12G259700 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.7e-86 322.4 372 49.2
ATR0757G038 Amborella trichopoda HOM05D006594 ORTHO05D008383 2.6e-75 287.0 599 34.2
Gohir.A08G100500 Gossypium hirsutum HOM05D006594 ORTHO05D008383 5.9e-75 285.8 356 49.4
Gorai.004G119800 Gossypium raimondii HOM05D006594 ORTHO05D008383 1.1e-70 271.6 470 40.9
AUR62016008 Chenopodium quinoa HOM05D006594 ORTHO05D008383 4.8e-69 266.2 438 39.5
A06p20700 Brassica napus HOM05D006594 ORTHO05D008383 8.2e-69 265.4 234 59.4
Nitab4.5_0001508g0080 Nicotiana tabacum HOM05D006594 ORTHO05D008383 1.7e-66 257.7 234 56.0
FvH4_7g29210 Fragaria vesca HOM05D006594 ORTHO05D008383 2.3e-63 247.3 334 48.2
unitig_0.g463 Utricularia gibba HOM05D006594 ORTHO05D008383 8.2e-61 238.8 252 50.0
SEGI_30493 Sequoiadendron giganteum HOM05D006594 ORTHO05D008383 1.0e-58 231.9 529 31.2
Thecc.03G173100 Theobroma cacao HOM05D006594 ORTHO05D008383 2.2e-58 230.7 263 49.8
arahy.Tifrunner.gnm1.ann1.J8117K Arachis hypogaea HOM05D006594 ORTHO05D008383 1.8e-55 221.1 252 51.6
Gohir.D08G112040 Gossypium hirsutum HOM05D006594 ORTHO05D008383 1.3e-53 214.9 459 37.7
Lj1P995T25 Lonicera japonica HOM05D006594 ORTHO05D008383 1.7e-45 188.0 145 66.9
arahy.Tifrunner.gnm1.ann1.PB1XHH Arachis hypogaea HOM05D006594 ORTHO05D008383 1.0e-42 178.7 392 35.2
arahy.Tifrunner.gnm1.ann1.A65ZGP Arachis hypogaea HOM05D006594 ORTHO05D008383 2.1e-40 171.0 180 53.9
VMungo0331G1728 Vigna mungo HOM05D006594 ORTHO05D008383 1.8e-39 167.9 198 51.5
SMO116G0206 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 1.2e-38 165.2 475 27.4
Zm00001eb378500 Zea mays HOM05D006594 ORTHO05D008383 4.6e-35 153.3 450 30.7
Nitab4.5_0000716g0260 Nicotiana tabacum HOM05D006594 ORTHO05D008383 6.6e-34 149.4 314 33.1
Mapoly0061s0021 Marchantia polymorpha HOM05D006594 ORTHO05D008383 9.5e-33 145.6 523 26.2
MD01G1198800 Malus domestica HOM05D006594 ORTHO05D008383 2.1e-32 144.4 465 29.5
AL1G10170 Arabidopsis lyrata HOM05D006594 ORTHO05D008383 2.8e-32 144.1 119 63.9
Os06g0129000 Oryza sativa ssp. japonica HOM05D006594 ORTHO05D008383 7.8e-27 125.9 448 28.6
VMungo1215G2423 Vigna mungo HOM05D006594 ORTHO05D008383 3.2e-20 104.0 175 41.7
Atru.chr1.484 Acer truncatum HOM05D006594 ORTHO05D008383 3.5e-19 100.5 115 53.0
VMungo0331G1316 Vigna mungo HOM05D006594 ORTHO05D008383 2.5e-17 94.4 85 56.5
VMungo1215G0888 Vigna mungo HOM05D006594 ORTHO05D008383 1.2e-16 92.0 56 76.8
Lj1E995T0 Lonicera japonica HOM05D006594 ORTHO05D008383 2.1e-16 91.3 136 39.7
unitig_0.g462 Utricularia gibba HOM05D006594 ORTHO05D008383 6.2e-16 89.7 152 39.5
Duzib068G0509 Durio zibethinus HOM05D006594 ORTHO05D008383 5.8e-14 83.2 173 35.3
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 2.9e-13 80.9 114 37.7
EL10Ac3g05712 Beta vulgaris HOM05D006594 ORTHO05D008383 1.1e-12 79.0 112 45.5
arahy.Tifrunner.gnm1.ann1.0F3SR2 Arachis hypogaea HOM05D006594 ORTHO05D008383 3.6e-08 63.9 49 59.2
SMO195G0056 Selaginella moellendorffii HOM05D006594 ORTHO05D008383 9.0e-07 59.3 126 27.0


User provided reference genes

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