Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G155300 Glycine max HOM05D005596 ORTHO05D006994 7.3e-74 280.4 137 100.0
Glyma.10G239200 Glycine max HOM05D005596 ORTHO05D006994 2.4e-32 142.5 74 95.9
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 2.2e-30 136.0 73 87.7
TPR.G10819 Trifolium pratense HOM05D005596 ORTHO05D006994 8.5e-30 134.0 73 84.9
Ca_10798_v3 Cicer arietinum L. HOM05D005596 ORTHO05D006994 1.4e-29 133.3 73 87.7
Phvul.007G066540 Phaseolus vulgaris HOM05D005596 ORTHO05D006994 1.9e-29 132.9 73 89.0
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 1.4e-27 126.7 74 85.1
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 1.5e-26 123.2 73 82.2
GSVIVG01010628001 Vitis vinifera HOM05D005596 ORTHO05D006994 5.7e-26 121.3 73 78.1
Cfa008276 Carpinus fangiana HOM05D005596 ORTHO05D006994 1.3e-25 120.2 73 79.5
LjContig00238g0007789 Lotus japonicus HOM05D005596 ORTHO05D006994 1.3e-25 120.2 73 80.8
Lalb_Chr06g0160971 Lupinus albus HOM05D005596 ORTHO05D006994 2.2e-25 119.4 73 82.2
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 2.8e-25 119.0 74 79.7
Haze_13762 Corylus avellana HOM05D005596 ORTHO05D006994 3.7e-25 118.6 73 78.1
QL09p015812 Quercus lobata HOM05D005596 ORTHO05D006994 3.7e-25 118.6 73 78.1
QL09p016060 Quercus lobata HOM05D005596 ORTHO05D006994 3.7e-25 118.6 73 78.1
Sabra12G0100700 Salix brachista HOM05D005596 ORTHO05D006994 4.8e-25 118.2 74 77.0
Cpa.g.sc107.2 Carica papaya HOM05D005596 ORTHO05D006994 6.3e-25 117.9 73 79.5
MBI12_g25031_MAGBIO Magnolia biondii HOM05D005596 ORTHO05D006994 1.1e-24 117.1 73 74.0
Atru.chr1.530 Acer truncatum HOM05D005596 ORTHO05D006994 1.4e-24 116.7 75 77.3
Lj8A29T43 Lonicera japonica HOM05D005596 ORTHO05D006994 1.4e-24 116.7 77 76.6
Duzib205G1479 Durio zibethinus HOM05D005596 ORTHO05D006994 1.8e-24 116.3 73 74.0
AT5G52030 Arabidopsis thaliana HOM05D005596 ORTHO05D006994 2.4e-24 115.9 78 75.6
Carub.0008s1212 Capsella rubella HOM05D005596 ORTHO05D006994 2.4e-24 115.9 81 75.3
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 2.4e-24 115.9 73 75.3
MELO3C006872.2 Cucumis melo HOM05D005596 ORTHO05D006994 3.1e-24 115.5 73 75.3
Aa31LG3G8420 Aethionema arabicum HOM05D005596 ORTHO05D006994 4.1e-24 115.2 75 78.7
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 4.1e-24 115.2 73 75.3
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 4.1e-24 115.2 73 75.3
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 4.1e-24 115.2 73 74.0
CSS0004859 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 5.3e-24 114.8 74 77.0
CSS0017210 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 7.0e-24 114.4 74 77.0
DCAR_018164 Daucus carota HOM05D005596 ORTHO05D006994 7.0e-24 114.4 73 74.0
Manes.06G143300 Manihot esculenta HOM05D005596 ORTHO05D006994 7.0e-24 114.4 73 75.3
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 7.0e-24 114.4 73 71.2
MD01G1196400 Malus domestica HOM05D005596 ORTHO05D006994 9.1e-24 114.0 80 70.0
Aqoxy7G00456 Aquilegia oxysepala HOM05D005596 ORTHO05D006994 1.2e-23 113.6 76 71.1
Gohir.D09G040500 Gossypium hirsutum HOM05D005596 ORTHO05D006994 1.2e-23 113.6 73 74.0
Gorai.006G046300 Gossypium raimondii HOM05D005596 ORTHO05D006994 1.2e-23 113.6 73 74.0
Potri.012G133900 Populus trichocarpa HOM05D005596 ORTHO05D006994 1.2e-23 113.6 74 77.0
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 1.6e-23 113.2 75 74.7
vmacro06726 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 1.6e-23 113.2 73 72.6
Actinidia28519 Actinidia chinensis HOM05D005596 ORTHO05D006994 2.6e-23 112.5 73 75.3
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 2.6e-23 112.5 73 75.3
BcaC03g14556 Brassica carinata HOM05D005596 ORTHO05D006994 2.6e-23 112.5 77 75.3
C02p20060 Brassica napus HOM05D005596 ORTHO05D006994 2.6e-23 112.5 77 75.3
BolC2t08136H Brassica oleracea HOM05D005596 ORTHO05D006994 2.6e-23 112.5 77 75.3
CARHR264970 Cardamine hirsuta HOM05D005596 ORTHO05D006994 2.6e-23 112.5 78 73.1
Eucgr.K00221 Eucalyptus grandis HOM05D005596 ORTHO05D006994 2.6e-23 112.5 73 68.5
Hma1.2p1_0099F.1_g048580 Hydrangea macrophylla HOM05D005596 ORTHO05D006994 2.6e-23 112.5 73 75.3
Thecc.03G170100 Theobroma cacao HOM05D005596 ORTHO05D006994 2.6e-23 112.5 73 71.2
BcaB05g23951 Brassica carinata HOM05D005596 ORTHO05D006994 3.5e-23 112.1 78 74.4
Gohir.A09G039400 Gossypium hirsutum HOM05D005596 ORTHO05D006994 3.5e-23 112.1 73 74.0
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 3.5e-23 112.1 73 72.6
Sp6g14270 Schrenkiella parvula HOM05D005596 ORTHO05D006994 3.5e-23 112.1 77 75.3
AL8G26370 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 4.5e-23 111.7 76 75.0
Thhalv10013712m.g Eutrema salsugineum HOM05D005596 ORTHO05D006994 4.5e-23 111.7 76 73.7
FvH4_7g28970 Fragaria vesca HOM05D005596 ORTHO05D006994 4.5e-23 111.7 78 73.1
FAN01G2242 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.5e-23 111.7 78 73.1
FAN06G1108 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.5e-23 111.7 78 73.1
FAN06G4254 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.5e-23 111.7 78 73.1
FAN10G2089 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.5e-23 111.7 78 73.1
FAN10G3222 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.5e-23 111.7 78 73.1
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 4.5e-23 111.7 73 71.2
A02p12010 Brassica napus HOM05D005596 ORTHO05D006994 5.9e-23 111.3 78 73.1
BraA02t06264Z Brassica rapa HOM05D005596 ORTHO05D006994 5.9e-23 111.3 78 73.1
FAN03G2823 Fragaria x ananassa HOM05D005596 ORTHO05D006994 5.9e-23 111.3 78 73.1
Peaxi162Scf00648g00016 Petunia axillaris HOM05D005596 ORTHO05D006994 5.9e-23 111.3 73 75.3
RcHm_v2.0_Chr1g0376671 Rosa chinensis HOM05D005596 ORTHO05D006994 5.9e-23 111.3 78 73.1
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 5.9e-23 111.3 73 71.2
arahy.Tifrunner.gnm1.ann1.EY18QM Arachis hypogaea HOM05D005596 ORTHO05D006994 7.7e-23 110.9 74 78.4
FAN03G1867 Fragaria x ananassa HOM05D005596 ORTHO05D006994 7.7e-23 110.9 78 73.1
vmacro06733 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 7.7e-23 110.9 73 71.2
CAN.G548.11 Capsicum annuum HOM05D005596 ORTHO05D006994 1.0e-22 110.5 73 74.0
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 1.3e-22 110.2 74 77.0
ECA233G5181 Erigeron canadensis HOM05D005596 ORTHO05D006994 2.2e-22 109.4 73 74.0
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 2.2e-22 109.4 77 70.1
Hund04701 Selenicereus undatus HOM05D005596 ORTHO05D006994 2.2e-22 109.4 74 73.0
Solyc03g026260.3 Solanum lycopersicum HOM05D005596 ORTHO05D006994 2.2e-22 109.4 73 74.0
Sopen03g005130 Solanum pennellii HOM05D005596 ORTHO05D006994 2.2e-22 109.4 73 74.0
PGSC0003DMG400014264 Solanum tuberosum HOM05D005596 ORTHO05D006994 2.2e-22 109.4 73 74.0
Rhsim03G0176700 Rhododendron simsii HOM05D005596 ORTHO05D006994 6.5e-22 107.8 73 69.9
Os08g0545700 Oryza sativa ssp. japonica HOM05D005596 ORTHO05D006994 1.9e-21 106.3 73 72.6
AUR62021241 Chenopodium quinoa HOM05D005596 ORTHO05D006994 2.5e-21 105.9 73 68.5
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 3.2e-21 105.5 73 69.9
Lsat_1_v5_gn_8_7641 Lactuca sativa HOM05D005596 ORTHO05D006994 3.2e-21 105.5 77 67.5
Cc02_g03410 Coffea canephora HOM05D005596 ORTHO05D006994 4.2e-21 105.1 73 69.9
MELO3C031206.2 Cucumis melo HOM05D005596 ORTHO05D006994 4.2e-21 105.1 73 71.2
Prupe.2G289700 Prunus persica HOM05D005596 ORTHO05D006994 4.2e-21 105.1 82 67.1
Zm00001eb037540 Zea mays HOM05D005596 ORTHO05D006994 5.5e-21 104.8 97 56.7
ATR0757G105 Amborella trichopoda HOM05D005596 ORTHO05D006994 7.2e-21 104.4 73 68.5
SalBow4G2853 Salvia bowleyana HOM05D005596 ORTHO05D006994 7.2e-21 104.4 77 70.1
EL10Ac3g05686 Beta vulgaris HOM05D005596 ORTHO05D006994 1.2e-20 103.6 73 67.1
HanXRQChr13g0405601 Helianthus annuus HOM05D005596 ORTHO05D006994 1.2e-20 103.6 73 69.9
THA.LOC104811480 Tarenaya hassleriana HOM05D005596 ORTHO05D006994 2.1e-20 102.8 73 67.1
SGA_v2.0_scaffold2G01084 Striga asiatica HOM05D005596 ORTHO05D006994 2.7e-20 102.4 73 69.9
AUR62016035 Chenopodium quinoa HOM05D005596 ORTHO05D006994 3.6e-20 102.1 73 67.1
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 4.7e-20 101.7 73 68.5
EL10Ac5g12249 Beta vulgaris HOM05D005596 ORTHO05D006994 2.3e-19 99.4 73 64.4
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 2.3e-19 99.4 73 65.8
HPP92_020336 Vanilla planifolia HOM05D005596 ORTHO05D006994 2.3e-19 99.4 73 63.0
unitig_0.g2489 Utricularia gibba HOM05D005596 ORTHO05D006994 3.0e-19 99.0 73 67.1
Sc25g0000360 Simmondsia chinensis HOM05D005596 ORTHO05D006994 1.5e-18 96.7 77 64.9
Nitab4.5_0001083g0020 Nicotiana tabacum HOM05D005596 ORTHO05D006994 4.4e-18 95.1 73 64.4
Nitab4.5_0002394g0030 Nicotiana tabacum HOM05D005596 ORTHO05D006994 1.7e-17 93.2 74 67.6
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 5.9e-15 84.7 46 87.0
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 2.9e-14 82.4 49 77.6
CBR_g7940 Chara braunii HOM05D000019 ORTHO05D000048 1.5e-13 80.1 61 67.2
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 1.9e-13 79.7 77 54.5
CiPaw.01G039000 Carya illinoinensis HOM05D005596 ORTHO05D006994 2.5e-13 79.3 49 79.6
Pp3c25_14680 Physcomitrium patens HOM05D005596 ORTHO05D006994 1.2e-12 77.0 48 70.8
MELO3C004678.2 Cucumis melo HOM05D005596 ORTHO05D006994 6.1e-12 74.7 46 78.3
PRCOL_00003000 Prasinoderma coloniale HOM05D005596 ORTHO05D006994 3.0e-11 72.4 48 68.8
MELO3C010054.2 Cucumis melo HOM05D005596 ORTHO05D006994 6.8e-11 71.2 47 68.1
AagrBONN_evm.TU.Sc2ySwM_344.2862 Anthoceros agrestis HOM05D005596 ORTHO05D006994 1.5e-10 70.1 49 65.3
Cre16.g677800 Chlamydomonas reinhardtii HOM05D005596 ORTHO05D006994 1.8e-08 63.2 54 63.0
MELO3C035596.2 Cucumis melo HOM05D005596 ORTHO05D006994 4.5e-07 58.5 73 47.9
MD07G1263300 Malus domestica HOM05D005596 ORTHO05D006994 3.8e-06 55.5 34 79.4


User provided reference genes

Program Settings