Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G154300 Glycine max HOM05D006286 ORTHO05D007741 4.9e-111 404.4 201 100.0
Glyma.10G240400 Glycine max HOM05D006286 ORTHO05D007741 1.1e-99 366.7 203 90.1
Phvul.007G065700 Phaseolus vulgaris HOM05D006286 ORTHO05D007741 5.9e-96 354.4 206 86.9
VMungo0720G2540 Vigna mungo HOM05D006286 ORTHO05D007741 1.0e-95 353.6 198 89.4
arahy.Tifrunner.gnm1.ann1.MQ4KH5 Arachis hypogaea HOM05D006286 ORTHO05D007741 1.9e-86 322.8 196 80.6
arahy.Tifrunner.gnm1.ann1.TWGE9F Arachis hypogaea HOM05D006286 ORTHO05D007741 1.2e-85 320.1 193 80.8
Lj5g0022226 Lotus japonicus HOM05D006286 ORTHO05D007741 1.8e-84 316.2 206 78.6
Ca_10810_v3 Cicer arietinum L. HOM05D006286 ORTHO05D007741 6.5e-79 297.7 203 74.9
TPR.G17410 Trifolium pratense HOM05D006286 ORTHO05D007741 6.5e-79 297.7 203 75.4
Atru.chr1.554 Acer truncatum HOM05D006286 ORTHO05D007741 1.0e-76 290.4 204 72.5
Haze_13788 Corylus avellana HOM05D006286 ORTHO05D007741 2.0e-75 286.2 200 73.0
Lalb_Chr06g0160901 Lupinus albus HOM05D006286 ORTHO05D007741 2.0e-75 286.2 192 75.5
Psat6g201680 Pisum sativum HOM05D006286 ORTHO05D007741 4.4e-75 285.0 194 75.8
Sabra15G0147300 Salix brachista HOM05D006286 ORTHO05D007741 9.7e-75 283.9 198 73.7
Cfa008258 Carpinus fangiana HOM05D006286 ORTHO05D007741 3.7e-74 282.0 200 72.0
Prupe.2G287700 Prunus persica HOM05D006286 ORTHO05D007741 6.3e-74 281.2 203 71.4
Manes.14G030600 Manihot esculenta HOM05D006286 ORTHO05D007741 8.2e-74 280.8 205 69.3
CiPaw.03G100700 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.4e-73 280.0 199 71.9
FAN10G3629 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.4e-73 280.0 205 70.2
QL09p015278 Quercus lobata HOM05D006286 ORTHO05D007741 1.8e-73 279.6 203 70.4
Ciclev10005723m.g Citrus clementina HOM05D006286 ORTHO05D007741 3.1e-73 278.9 204 69.6
Potri.015G135300 Populus trichocarpa HOM05D006286 ORTHO05D007741 3.1e-73 278.9 197 72.6
RcHm_v2.0_Chr1g0376301 Rosa chinensis HOM05D006286 ORTHO05D007741 4.1e-73 278.5 205 70.7
FvH4_7g28750 Fragaria vesca HOM05D006286 ORTHO05D007741 5.3e-73 278.1 205 69.8
FAN06G1618 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.3e-73 278.1 205 69.8
Thecc.03G167300 Theobroma cacao HOM05D006286 ORTHO05D007741 9.1e-73 277.3 205 70.7
FAN03G0223 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.6e-72 276.6 205 69.8
FAN03G0937 Fragaria x ananassa HOM05D006286 ORTHO05D007741 1.6e-72 276.6 205 69.8
TWI39G0272 Tripterygium wilfordii HOM05D006286 ORTHO05D007741 1.6e-72 276.6 203 69.5
GSVIVG01018444001 Vitis vinifera HOM05D006286 ORTHO05D007741 2.7e-72 275.8 203 70.9
FAN01G0056 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.9e-72 274.6 205 69.3
THA.LOC104825086 Tarenaya hassleriana HOM05D006286 ORTHO05D007741 1.7e-71 273.1 205 67.8
FAN06G4550 Fragaria x ananassa HOM05D006286 ORTHO05D007741 5.0e-71 271.6 205 68.8
MD01G1193900 Malus domestica HOM05D006286 ORTHO05D007741 5.0e-71 271.6 200 69.0
Eucgr.A02845 Eucalyptus grandis HOM05D006286 ORTHO05D007741 1.9e-70 269.6 203 70.0
SGA_v2.0_scaffold113G31783 Striga asiatica HOM05D006286 ORTHO05D007741 4.2e-70 268.5 196 66.3
Cpa.g.sc4.205 Carica papaya HOM05D006286 ORTHO05D007741 9.4e-70 267.3 198 68.2
Gorai.013G064300 Gossypium raimondii HOM05D006286 ORTHO05D007741 1.2e-69 266.9 209 68.4
Gohir.D13G056900 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.6e-69 266.5 209 68.4
Duzib084G1364 Durio zibethinus HOM05D006286 ORTHO05D007741 2.1e-69 266.2 205 67.3
CSS0046699 Camellia sinensis var. sinensis HOM05D006286 ORTHO05D007741 3.6e-69 265.4 198 69.7
DCAR_018141 Daucus carota HOM05D006286 ORTHO05D007741 4.7e-69 265.0 189 69.3
Gohir.A09G179500 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.8e-68 263.1 195 68.2
Rhsim03G0175100 Rhododendron simsii HOM05D006286 ORTHO05D007741 4.0e-68 261.9 203 68.0
HanXRQChr14g0461801 Helianthus annuus HOM05D006286 ORTHO05D007741 6.8e-68 261.2 200 67.0
ClCG05G007720 Citrullus lanatus HOM05D006286 ORTHO05D007741 8.8e-68 260.8 209 65.6
CANSAT25G1059 Cannabis sativa HOM05D006286 ORTHO05D007741 1.2e-67 260.4 203 63.5
COL.COLO4_14231 Corchorus olitorius HOM05D006286 ORTHO05D007741 1.2e-67 260.4 179 71.5
TAR629G0337 Trochodendron aralioides HOM05D006286 ORTHO05D007741 1.2e-67 260.4 192 68.8
Cc02_g03560 Coffea canephora HOM05D006286 ORTHO05D007741 1.5e-67 260.0 197 67.0
Gohir.A13G064700 Gossypium hirsutum HOM05D006286 ORTHO05D007741 1.5e-67 260.0 209 67.5
Lsat_1_v5_gn_2_130220 Lactuca sativa HOM05D006286 ORTHO05D007741 1.5e-67 260.0 204 65.7
Gorai.006G196900 Gossypium raimondii HOM05D006286 ORTHO05D007741 3.4e-67 258.8 195 66.7
Oeu047963.2 Olea europaea HOM05D006286 ORTHO05D007741 4.4e-67 258.5 199 67.3
CsaV3_3G016660 Cucumis sativus L. HOM05D006286 ORTHO05D007741 1.7e-66 256.5 209 64.6
MELO3C006861.2 Cucumis melo HOM05D006286 ORTHO05D007741 2.8e-66 255.8 209 63.6
Thhalv10014484m.g Eutrema salsugineum HOM05D006286 ORTHO05D007741 4.8e-66 255.0 194 65.5
Sed0023063 Sechium edule HOM05D006286 ORTHO05D007741 6.3e-66 254.6 203 66.0
Nn1g01303 Nelumbo nucifera HOM05D006286 ORTHO05D007741 4.1e-65 251.9 192 66.1
PSO782G2014 Papaver somniferum HOM05D006286 ORTHO05D007741 7.0e-65 251.1 208 64.4
Rhsim09G0195200 Rhododendron simsii HOM05D006286 ORTHO05D007741 1.2e-64 250.4 190 67.4
Ah.13g067810 Amaranthus hybridus HOM05D006286 ORTHO05D007741 4.5e-64 248.4 179 70.4
Carub.0008s1192 Capsella rubella HOM05D006286 ORTHO05D007741 5.9e-64 248.1 193 65.8
Dinv28504 Davidia involucrata HOM05D006286 ORTHO05D007741 5.9e-64 248.1 265 52.8
vmacro09869 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 5.9e-64 248.1 192 65.6
Sopen03g002810 Solanum pennellii HOM05D006286 ORTHO05D007741 1.3e-63 246.9 198 65.2
Aqoxy7G00487 Aquilegia oxysepala HOM05D006286 ORTHO05D007741 1.7e-63 246.5 197 64.5
Actinidia25052 Actinidia chinensis HOM05D006286 ORTHO05D007741 2.9e-63 245.7 184 68.5
PSO478G4977 Papaver somniferum HOM05D006286 ORTHO05D007741 2.9e-63 245.7 200 64.0
Solyc03g006820.3 Solanum lycopersicum HOM05D006286 ORTHO05D007741 2.9e-63 245.7 198 64.6
PSO782G5477 Papaver somniferum HOM05D006286 ORTHO05D007741 6.6e-63 244.6 183 67.8
Aa31sc908G10 Aethionema arabicum HOM05D006286 ORTHO05D007741 8.6e-63 244.2 196 63.3
AT5G51880 Arabidopsis thaliana HOM05D006286 ORTHO05D007741 8.6e-63 244.2 197 64.5
Migut.F00396 Erythranthe guttata HOM05D006286 ORTHO05D007741 1.1e-62 243.8 199 63.3
MBI12_g36686_MAGBIO Magnolia biondii HOM05D006286 ORTHO05D007741 4.2e-62 241.9 190 65.3
ECA238G1566 Erigeron canadensis HOM05D006286 ORTHO05D007741 7.2e-62 241.1 197 63.5
Sp6g14140 Schrenkiella parvula HOM05D006286 ORTHO05D007741 7.2e-62 241.1 179 66.5
Lj8A31T63 Lonicera japonica HOM05D006286 ORTHO05D007741 9.5e-62 240.7 159 75.5
BcaB08g35541 Brassica carinata HOM05D006286 ORTHO05D007741 1.2e-61 240.4 196 63.3
Hund04686 Selenicereus undatus HOM05D006286 ORTHO05D007741 1.2e-61 240.4 205 62.0
PGSC0003DMG400024248 Solanum tuberosum HOM05D006286 ORTHO05D007741 1.2e-61 240.4 196 64.3
CAN.G1097.8 Capsicum annuum HOM05D006286 ORTHO05D007741 3.6e-61 238.8 202 62.9
Actinidia14215 Actinidia chinensis HOM05D006286 ORTHO05D007741 4.7e-61 238.4 207 62.3
AL8G26180 Arabidopsis lyrata HOM05D006286 ORTHO05D007741 4.7e-61 238.4 184 66.3
C09p41380 Brassica napus HOM05D006286 ORTHO05D007741 4.7e-61 238.4 201 64.2
BolC9t57014H Brassica oleracea HOM05D006286 ORTHO05D007741 4.7e-61 238.4 201 64.2
Nitab4.5_0004911g0020 Nicotiana tabacum HOM05D006286 ORTHO05D007741 6.1e-61 238.0 184 65.2
EL10Ac3g05740 Beta vulgaris HOM05D006286 ORTHO05D007741 1.0e-60 237.3 179 66.5
Peaxi162Scf00192g00519 Petunia axillaris HOM05D006286 ORTHO05D007741 1.0e-60 237.3 198 63.6
BcaC04g20627 Brassica carinata HOM05D006286 ORTHO05D007741 1.4e-60 236.9 200 64.0
A10p09720 Brassica napus HOM05D006286 ORTHO05D007741 1.8e-60 236.5 202 61.9
BraA10t43052Z Brassica rapa HOM05D006286 ORTHO05D007741 1.8e-60 236.5 202 61.9
AUR62021266 Chenopodium quinoa HOM05D006286 ORTHO05D007741 2.3e-60 236.1 179 66.5
MSTRG.8433 Avicennia marina HOM05D006286 ORTHO05D007741 4.0e-60 235.3 251 51.4
vmacro06741 Vaccinium macrocarpon HOM05D006286 ORTHO05D007741 2.6e-59 232.6 174 67.8
Sc13g0008250 Simmondsia chinensis HOM05D006286 ORTHO05D007741 1.1e-57 227.3 189 60.8
unitig_37.g11947 Utricularia gibba HOM05D006286 ORTHO05D007741 1.4e-57 226.9 181 62.4
ATR0757G128 Amborella trichopoda HOM05D006286 ORTHO05D007741 5.4e-57 224.9 183 59.0
Nitab4.5_0000832g0010 Nicotiana tabacum HOM05D006286 ORTHO05D007741 2.3e-55 219.5 156 70.5
AUR62016058 Chenopodium quinoa HOM05D006286 ORTHO05D007741 2.9e-55 219.2 156 70.5
Os03g0119000 Oryza sativa ssp. japonica HOM05D006286 ORTHO05D007741 6.6e-55 218.0 179 62.0
PGR042G3452 Punica granatum HOM05D006286 ORTHO05D007741 1.9e-54 216.5 188 60.6
HPP92_003528 Vanilla planifolia HOM05D006286 ORTHO05D007741 9.5e-54 214.2 197 55.8
SalBow2G2245 Salvia bowleyana HOM05D006286 ORTHO05D007741 8.0e-53 211.1 198 57.6
CARHR264790 Cardamine hirsuta HOM05D006286 ORTHO05D007741 1.4e-52 210.3 164 66.5
CiPaw.15G075500 Carya illinoinensis HOM05D006286 ORTHO05D007741 1.1e-49 200.7 179 59.8
CDE12G0688 Ceratophyllum demersum HOM05D006286 ORTHO05D007741 9.2e-49 197.6 157 63.1
Actinidia03097 Actinidia chinensis HOM05D006286 ORTHO05D007741 7.8e-48 194.5 134 73.1
SEGI_34239 Sequoiadendron giganteum HOM05D006286 ORTHO05D007741 3.0e-47 192.6 188 54.3
Mapoly0028s0137 Marchantia polymorpha HOM05D006286 ORTHO05D007741 4.4e-43 178.7 177 51.4
AagrBONN_evm.TU.Sc2ySwM_368.2699 Anthoceros agrestis HOM05D006286 ORTHO05D007741 6.4e-42 174.9 185 51.9
SMO139G0115 Selaginella moellendorffii HOM05D006286 ORTHO05D007741 1.0e-39 167.5 177 47.5
Zm00001eb001360 Zea mays HOM05D006286 ORTHO05D007741 1.3e-39 167.2 176 50.6
Medtr1g101840 Medicago truncatula HOM05D006286 ORTHO05D007741 6.6e-39 164.9 99 79.8
Potri.012G133100 Populus trichocarpa HOM05D006286 ORTHO05D007741 8.6e-39 164.5 228 49.1
Gohir.D09G174800 Gossypium hirsutum HOM05D006286 ORTHO05D007741 6.8e-36 154.8 105 70.5
Pp3c22_4190 Physcomitrium patens HOM05D006286 ORTHO05D007741 1.9e-33 146.7 201 42.8
SHI13825 Sapria himalayana HOM05D000350 ORTHO05D000228 6.4e-26 121.7 83 69.9
Actinidia13543 Actinidia chinensis HOM05D006286 ORTHO05D007741 1.8e-20 103.6 95 58.9
Cfa025685 Carpinus fangiana HOM05D006286 ORTHO05D007741 1.1e-17 94.4 217 30.4
MCO04G355 Micromonas commoda HOM05D006286 ORTHO05D007741 7.1e-17 91.7 155 37.4
FvH4_2g14060 Fragaria vesca HOM05D006286 ORTHO05D007741 2.8e-13 79.7 73 60.3
RcHm_v2.0_Chr1g0376261 Rosa chinensis HOM05D006286 ORTHO05D007741 1.5e-11 73.9 49 75.5
Cre14.g619900 Chlamydomonas reinhardtii HOM05D006286 ORTHO05D007741 1.4e-09 67.4 126 34.9
Ah.14g078790 Amaranthus hybridus HOM05D006286 ORTHO05D007741 5.4e-09 65.5 49 65.3
MCO01G267 Micromonas commoda HOM05D049972 ORTHO05D049270 3.9e-07 59.3 160 26.2


User provided reference genes

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