Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G128800 Glycine max HOM05D006149 ORTHO05D007341 3.4e-68 261.9 171 100.0
Phvul.007G040000 Phaseolus vulgaris HOM05D006149 ORTHO05D007341 3.5e-57 225.3 127 94.5
VMungo0720G1566 Vigna mungo HOM05D006149 ORTHO05D007341 1.0e-56 223.8 150 91.3
arahy.Tifrunner.gnm1.ann1.0F7AFP Arachis hypogaea HOM05D006149 ORTHO05D007341 2.3e-56 222.6 172 83.1
arahy.Tifrunner.gnm1.ann1.GUMB1Z Arachis hypogaea HOM05D006149 ORTHO05D007341 8.6e-56 220.7 171 81.9
Glyma.10G262200 Glycine max HOM05D006149 ORTHO05D007341 5.6e-55 218.0 120 94.2
Lj5g0003815 Lotus japonicus HOM05D006149 ORTHO05D007341 2.8e-54 215.7 171 84.8
Ca_11076_v3 Cicer arietinum L. HOM05D006149 ORTHO05D007341 6.8e-53 211.1 126 88.1
Medtr1g107435 Medicago truncatula HOM05D006149 ORTHO05D007341 7.1e-50 201.1 125 86.4
Psat6g219120 Pisum sativum HOM05D006149 ORTHO05D007341 4.3e-47 191.8 120 85.0
Gohir.A03G186300 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.0e-44 183.0 125 79.2
TWI32G0763 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 2.6e-44 182.6 128 78.9
TWI34G0529 Tripterygium wilfordii HOM05D006149 ORTHO05D007341 4.4e-44 181.8 132 78.0
Dinv15763 Davidia involucrata HOM05D006149 ORTHO05D007341 5.8e-44 181.4 161 72.0
Nn4g25119 Nelumbo nucifera HOM05D006149 ORTHO05D007341 9.9e-44 180.6 122 81.1
Gohir.D02G207100 Gossypium hirsutum HOM05D006149 ORTHO05D007341 2.9e-43 179.1 123 78.9
Gorai.005G235000 Gossypium raimondii HOM05D006149 ORTHO05D007341 2.9e-43 179.1 123 78.9
PGR142G0815 Punica granatum HOM05D006149 ORTHO05D007341 2.9e-43 179.1 129 78.3
Hund06318 Selenicereus undatus HOM05D006149 ORTHO05D007341 8.4e-43 177.6 166 71.7
COL.COLO4_32597 Corchorus olitorius HOM05D006149 ORTHO05D007341 1.1e-42 177.2 128 75.8
Nn1g04703 Nelumbo nucifera HOM05D006149 ORTHO05D007341 2.4e-42 176.0 131 77.1
CsaV3_3G018210 Cucumis sativus L. HOM05D006149 ORTHO05D007341 1.2e-41 173.7 128 77.3
MELO3C019546.2 Cucumis melo HOM05D006149 ORTHO05D007341 1.6e-41 173.3 128 77.3
Duzib052G0317 Durio zibethinus HOM05D006149 ORTHO05D007341 1.6e-41 173.3 123 77.2
Dinv42191 Davidia involucrata HOM05D006149 ORTHO05D007341 2.1e-41 172.9 131 73.3
TAR628G0594 Trochodendron aralioides HOM05D006149 ORTHO05D007341 2.1e-41 172.9 121 77.7
Lalb_Chr21g0308351 Lupinus albus HOM05D006149 ORTHO05D007341 3.5e-41 172.2 122 78.7
Thecc.02G107700 Theobroma cacao HOM05D006149 ORTHO05D007341 3.5e-41 172.2 126 75.4
Cfa004575 Carpinus fangiana HOM05D006149 ORTHO05D007341 4.6e-41 171.8 126 75.4
Cpa.g.sc76.22 Carica papaya HOM05D006149 ORTHO05D007341 7.8e-41 171.0 136 72.1
Manes.10G076500 Manihot esculenta HOM05D006149 ORTHO05D007341 3.9e-40 168.7 125 76.0
AUR62039082 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.6e-40 167.9 134 69.4
Sabra09G0073900 Salix brachista HOM05D006149 ORTHO05D007341 1.1e-39 167.2 128 71.9
vmacro19450 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 1.1e-39 167.2 133 68.4
Potri.001G300300 Populus trichocarpa HOM05D006149 ORTHO05D007341 1.5e-39 166.8 125 72.8
ATR0618G054 Amborella trichopoda HOM05D006149 ORTHO05D007341 1.9e-39 166.4 121 77.7
Lj9A321G81 Lonicera japonica HOM05D006149 ORTHO05D007341 2.5e-39 166.0 118 76.3
Sed0001717 Sechium edule HOM05D006149 ORTHO05D007341 2.5e-39 166.0 127 75.6
unitig_22.g5723 Utricularia gibba HOM05D006149 ORTHO05D007341 3.3e-39 165.6 132 71.2
CDE02G4185 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 5.6e-39 164.9 125 76.8
CDE02G2507 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 7.3e-39 164.5 125 76.8
CANSAT25G3711 Cannabis sativa HOM05D006149 ORTHO05D007341 1.3e-38 163.7 126 73.0
Lsat_1_v5_gn_9_111221 Lactuca sativa HOM05D006149 ORTHO05D007341 1.6e-38 163.3 133 68.4
MD05G1089500 Malus domestica HOM05D006149 ORTHO05D007341 1.6e-38 163.3 133 68.4
Rhsim05G0088300 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.6e-38 163.3 135 68.9
RcHm_v2.0_Chr6g0255351 Rosa chinensis HOM05D006149 ORTHO05D007341 2.1e-38 162.9 124 74.2
SGA_v2.0_scaffold225G43080 Striga asiatica HOM05D006149 ORTHO05D007341 2.8e-38 162.5 123 73.2
THA.LOC104807242 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 3.6e-38 162.2 126 72.2
HanXRQChr03g0070291 Helianthus annuus HOM05D006149 ORTHO05D007341 1.1e-37 160.6 165 66.1
ClCG05G010280 Citrullus lanatus HOM05D006149 ORTHO05D007341 1.4e-37 160.2 121 75.2
FAN20G0990 Fragaria x ananassa HOM05D006149 ORTHO05D007341 1.8e-37 159.8 124 74.2
Nitab4.5_0005392g0090 Nicotiana tabacum HOM05D006149 ORTHO05D007341 3.1e-37 159.1 114 74.6
Nitab4.5_0002815g0010 Nicotiana tabacum HOM05D006149 ORTHO05D007341 5.3e-37 158.3 114 73.7
Ciclev10029393m.g Citrus clementina HOM05D006149 ORTHO05D007341 6.9e-37 157.9 120 70.8
Sc08g0001390 Simmondsia chinensis HOM05D006149 ORTHO05D007341 9.0e-37 157.5 134 70.9
Solyc01g107610.4 Solanum lycopersicum HOM05D006149 ORTHO05D007341 1.5e-36 156.8 113 73.5
Sed0008540 Sechium edule HOM05D006149 ORTHO05D007341 2.0e-36 156.4 122 73.8
AL3G46990 Arabidopsis lyrata HOM05D006149 ORTHO05D007341 2.6e-36 156.0 132 65.9
FvH4_2g05220 Fragaria vesca HOM05D006149 ORTHO05D007341 3.4e-36 155.6 126 70.6
FAN15G1894 Fragaria x ananassa HOM05D006149 ORTHO05D007341 3.4e-36 155.6 126 70.6
FAN24G0478 Fragaria x ananassa HOM05D000289 ORTHO05D007341 3.4e-36 155.6 126 70.6
MSTRG.16714 Avicennia marina HOM05D006149 ORTHO05D007341 5.8e-36 154.8 162 66.7
Migut.B00388 Erythranthe guttata HOM05D006149 ORTHO05D007341 9.9e-36 154.1 128 68.0
Thhalv10022867m.g Eutrema salsugineum HOM05D006149 ORTHO05D007341 9.9e-36 154.1 131 64.1
FAN27G1351 Fragaria x ananassa HOM05D000289 ORTHO05D007341 9.9e-36 154.1 126 69.8
Prupe.8G134800 Prunus persica HOM05D006149 ORTHO05D007341 1.3e-35 153.7 111 75.7
Sp3g28510 Schrenkiella parvula HOM05D006149 ORTHO05D007341 1.3e-35 153.7 130 64.6
Sopen01g049800 Solanum pennellii HOM05D006149 ORTHO05D007341 1.3e-35 153.7 113 72.6
PGSC0003DMG400025768 Solanum tuberosum HOM05D006149 ORTHO05D007341 1.3e-35 153.7 113 72.6
CDE04G1609 Ceratophyllum demersum HOM05D006149 ORTHO05D007341 1.7e-35 153.3 125 72.8
QL11p033743 Quercus lobata HOM05D006149 ORTHO05D007341 2.2e-35 152.9 182 62.1
ECA240G2462 Erigeron canadensis HOM05D006149 ORTHO05D007341 2.9e-35 152.5 166 67.5
SalBow6G4084 Salvia bowleyana HOM05D006149 ORTHO05D007341 2.9e-35 152.5 134 66.4
HPP92_004777 Vanilla planifolia HOM05D006149 ORTHO05D007341 2.9e-35 152.5 130 70.0
Actinidia27971 Actinidia chinensis HOM05D006149 ORTHO05D007341 3.8e-35 152.1 128 67.2
MD05G1088900 Malus domestica HOM05D006149 ORTHO05D007341 3.8e-35 152.1 186 52.2
CSS0036049 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 6.4e-35 151.4 127 67.7
CAN.G1231.7 Capsicum annuum HOM05D006149 ORTHO05D007341 1.4e-34 150.2 115 71.3
BcaB03g16271 Brassica carinata HOM05D006149 ORTHO05D007341 5.4e-34 148.3 127 63.8
BcaB08g34585 Brassica carinata HOM05D006149 ORTHO05D007341 5.4e-34 148.3 130 63.1
Os09g0104300 Oryza sativa ssp. japonica HOM05D006149 ORTHO05D007341 7.1e-34 147.9 89 86.5
Sabra16G0188500 Salix brachista HOM05D006149 ORTHO05D007341 9.3e-34 147.5 167 53.9
BcaC06g36046 Brassica carinata HOM05D006149 ORTHO05D007341 1.2e-33 147.1 128 64.8
Eucgr.E02957 Eucalyptus grandis HOM05D006149 ORTHO05D007341 1.2e-33 147.1 125 67.2
BcaC04g22139 Brassica carinata HOM05D006149 ORTHO05D007341 1.6e-33 146.7 128 64.1
C07p08530 Brassica napus HOM05D006149 ORTHO05D007341 1.6e-33 146.7 128 64.1
BolC7t41265H Brassica oleracea HOM05D006149 ORTHO05D007341 1.6e-33 146.7 128 64.1
PSO675G5876 Papaver somniferum HOM05D006149 ORTHO05D007341 1.6e-33 146.7 121 65.3
SHI05287 Sapria himalayana HOM05D006149 ORTHO05D007341 1.6e-33 146.7 126 66.7
PSO541G1364 Papaver somniferum HOM05D006149 ORTHO05D007341 1.0e-32 144.1 119 66.4
Aa31LG8G13110 Aethionema arabicum HOM05D006149 ORTHO05D007341 1.3e-32 143.7 134 61.2
AT2G15270 Arabidopsis thaliana HOM05D006149 ORTHO05D007341 1.3e-32 143.7 123 64.2
Carub.0003s2910 Capsella rubella HOM05D006149 ORTHO05D007341 1.3e-32 143.7 122 64.8
CARHR105640 Cardamine hirsuta HOM05D006149 ORTHO05D007341 1.3e-32 143.7 124 64.5
CiPaw.05G011400 Carya illinoinensis HOM05D006149 ORTHO05D007341 5.1e-32 141.7 111 71.2
AUR62010304 Chenopodium quinoa HOM05D006149 ORTHO05D007341 6.6e-32 141.4 112 68.8
Aqoxy3G02908 Aquilegia oxysepala HOM05D006149 ORTHO05D007341 8.7e-32 141.0 125 69.6
Rhsim11G0160200 Rhododendron simsii HOM05D006149 ORTHO05D007341 1.1e-31 140.6 205 52.7
THA.LOC104819555 Tarenaya hassleriana HOM05D006149 ORTHO05D007341 1.1e-31 140.6 82 87.8
Oeu017469.1 Olea europaea HOM05D006149 ORTHO05D007341 2.5e-31 139.4 120 68.3
Duzib248G1531 Durio zibethinus HOM05D006149 ORTHO05D007341 5.6e-31 138.3 127 67.7
A07p05350 Brassica napus HOM05D006149 ORTHO05D007341 1.3e-30 137.1 128 61.7
BraA07t28328Z Brassica rapa HOM05D006149 ORTHO05D007341 1.3e-30 137.1 128 61.7
Zm00001eb393310 Zea mays HOM05D006149 ORTHO05D007341 1.6e-30 136.7 81 86.4
Peaxi162Scf00016g02334 Petunia axillaris HOM05D006149 ORTHO05D007341 2.8e-30 136.0 124 65.3
Pp3c2_21780 Physcomitrium patens HOM05D006149 ORTHO05D007341 8.1e-30 134.4 101 77.2
Zm00001eb020500 Zea mays HOM05D006149 ORTHO05D007341 1.4e-29 133.7 80 85.0
SEGI_00829 Sequoiadendron giganteum HOM05D006149 ORTHO05D007341 7.6e-28 127.9 95 73.7
HanXRQChr02g0033021 Helianthus annuus HOM05D006149 ORTHO05D007341 9.9e-28 127.5 116 65.5
AagrBONN_evm.TU.Sc2ySwM_228.2976 Anthoceros agrestis HOM05D006149 ORTHO05D007341 2.2e-27 126.3 121 62.0
SMO364G0740 Selaginella moellendorffii HOM05D006149 ORTHO05D007341 2.9e-27 125.9 118 62.7
vmacro02004 Vaccinium macrocarpon HOM05D006149 ORTHO05D007341 4.9e-27 125.2 156 51.3
DCAR_001643 Daucus carota HOM05D006149 ORTHO05D007341 2.4e-26 122.9 96 69.8
EL10Ac9g22279 Beta vulgaris HOM05D006149 ORTHO05D007341 4.2e-26 122.1 140 55.7
CANSAT25G0333 Cannabis sativa HOM05D006149 ORTHO05D007341 4.2e-26 122.1 114 62.3
Pp3c1_15220 Physcomitrium patens HOM05D006149 ORTHO05D007341 3.9e-24 115.5 95 71.6
CBR_g44544 Chara braunii HOM05D006149 ORTHO05D007341 2.5e-23 112.8 84 73.8
Mapoly0056s0071 Marchantia polymorpha HOM05D006149 ORTHO05D007341 6.2e-22 108.2 107 59.8
Ciclev10006213m.g Citrus clementina HOM05D006149 ORTHO05D007341 1.5e-20 103.6 106 54.7
Haze_10168 Corylus avellana HOM05D006149 ORTHO05D007341 1.5e-20 103.6 248 34.7
PGR042G0697 Punica granatum HOM05D006149 ORTHO05D007341 4.5e-20 102.1 80 70.0
Actinidia05494 Actinidia chinensis HOM05D006149 ORTHO05D007341 2.2e-19 99.8 77 68.8
CSS0028016 Camellia sinensis var. sinensis HOM05D006149 ORTHO05D007341 1.3e-16 90.5 89 59.6
TAR376G0787 Trochodendron aralioides HOM05D006149 ORTHO05D007341 8.7e-16 87.8 75 66.7
Cre03.g193150 Chlamydomonas reinhardtii HOM05D006149 ORTHO05D007341 1.6e-14 83.6 96 53.1
Ah.01g018230 Amaranthus hybridus HOM05D006149 ORTHO05D007341 2.4e-13 79.7 82 74.4
MBI12_g27878_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 1.2e-12 77.4 93 54.8
QL11p033903 Quercus lobata HOM05D006149 ORTHO05D007341 1.5e-12 77.0 75 76.0
SMO197G0096 Selaginella moellendorffii HOM05D024641 ORTHO05D007341 2.1e-09 66.6 74 54.1
Lsat_1_v5_gn_5_63380 Lactuca sativa HOM05D000113 ORTHO05D012184 3.3e-07 59.3 48 60.4
MCO08G345 Micromonas commoda HOM05D006149 ORTHO05D007341 4.3e-07 58.9 67 47.8
Thecc.04G122800 Theobroma cacao HOM05D006149 ORTHO05D007341 1.6e-06 57.0 42 64.3
MBI03_g28533_MAGBIO Magnolia biondii HOM05D006149 ORTHO05D007341 6.3e-06 55.1 84 47.6


User provided reference genes

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