Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G127500 Glycine max HOM05D000049 ORTHO05D008785 1.9e-72 275.8 143 100.0
Glyma.20G129600 Glycine max HOM05D000049 ORTHO05D008785 1.5e-66 256.1 143 91.6
Glyma.10G263000 Glycine max HOM05D000049 ORTHO05D008785 6.1e-63 244.2 143 89.5
Phvul.007G038900 Phaseolus vulgaris HOM05D000049 ORTHO05D008785 5.3e-59 231.1 143 83.2
VMungo0720G1000 Vigna mungo HOM05D000049 ORTHO05D008785 5.0e-57 224.6 143 82.5
Lalb_Chr02g0145351 Lupinus albus HOM05D000049 ORTHO05D008785 3.8e-49 198.4 143 71.3
Lj5g0006015 Lotus japonicus HOM05D000049 ORTHO05D008785 9.4e-48 193.7 144 73.6
Psat6g219680 Pisum sativum HOM05D000049 ORTHO05D008785 1.4e-46 189.9 146 70.5
Thecc.02G106900 Theobroma cacao HOM05D000049 ORTHO05D008785 1.7e-44 183.0 144 70.1
TPR.G13867 Trifolium pratense HOM05D000049 ORTHO05D008785 1.1e-43 180.3 145 67.6
Duzib248G1051 Durio zibethinus HOM05D000049 ORTHO05D008785 2.7e-42 175.6 144 68.1
Duzib132G0396 Durio zibethinus HOM05D000049 ORTHO05D008785 7.7e-42 174.1 142 67.6
Atru.chr5.2581 Acer truncatum HOM05D000049 ORTHO05D008785 6.5e-41 171.0 144 66.7
Cpa.g.sc106.84 Carica papaya HOM05D000049 ORTHO05D008785 2.1e-39 166.0 146 66.4
Ciclev10029534m.g Citrus clementina HOM05D000049 ORTHO05D008785 1.4e-38 163.3 143 65.7
GSVIVG01003167001 Vitis vinifera HOM05D000049 ORTHO05D008785 1.8e-38 162.9 144 66.0
Medtr1g107490 Medicago truncatula HOM05D000049 ORTHO05D008785 3.0e-38 162.2 132 68.2
Atru.chr11.1081 Acer truncatum HOM05D000049 ORTHO05D008785 4.0e-38 161.8 142 64.1
Gohir.D02G207500 Gossypium hirsutum HOM05D000049 ORTHO05D008785 4.0e-38 161.8 146 64.4
Prupe.8G134100 Prunus persica HOM05D000049 ORTHO05D008785 4.0e-38 161.8 144 66.0
Manes.02G137400 Manihot esculenta HOM05D000049 ORTHO05D008785 6.8e-38 161.0 144 63.9
Gohir.A03G186700 Gossypium hirsutum HOM05D000049 ORTHO05D008785 1.5e-37 159.8 146 63.7
Hma1.2p1_0796F.1_g219130 Hydrangea macrophylla HOM05D000049 ORTHO05D008785 1.5e-37 159.8 140 66.4
CANSAT25G0973 Cannabis sativa HOM05D000049 ORTHO05D008785 2.0e-37 159.5 145 66.2
Gorai.005G235400 Gossypium raimondii HOM05D000049 ORTHO05D008785 2.0e-37 159.5 146 63.7
MD05G1088100 Malus domestica HOM05D000049 ORTHO05D008785 2.0e-37 159.5 148 62.8
QL11p033983 Quercus lobata HOM05D000049 ORTHO05D008785 2.6e-37 159.1 144 65.3
Cfa004569 Carpinus fangiana HOM05D000049 ORTHO05D008785 3.4e-37 158.7 147 68.0
arahy.Tifrunner.gnm1.ann1.KJA62A Arachis hypogaea HOM05D000049 ORTHO05D008785 5.7e-37 157.9 161 59.0
Hund06332 Selenicereus undatus HOM05D000049 ORTHO05D008785 7.5e-37 157.5 144 63.2
Ah.01g018130 Amaranthus hybridus HOM05D000049 ORTHO05D008785 9.8e-37 157.1 145 66.2
Haze_10161 Corylus avellana HOM05D000049 ORTHO05D008785 9.8e-37 157.1 147 67.3
CsaV3_7G008250 Cucumis sativus L. HOM05D000049 ORTHO05D008785 1.3e-36 156.8 145 64.1
Aqoxy5G01153 Aquilegia oxysepala HOM05D000049 ORTHO05D008785 4.9e-36 154.8 103 78.6
EL10Ac9g22295 Beta vulgaris HOM05D000049 ORTHO05D008785 4.9e-36 154.8 144 59.7
CANSAT25G0620 Cannabis sativa HOM05D000049 ORTHO05D008785 4.9e-36 154.8 143 65.0
AUR62039109 Chenopodium quinoa HOM05D000049 ORTHO05D008785 6.3e-36 154.5 144 61.1
FvH4_2g05321 Fragaria vesca HOM05D000049 ORTHO05D008785 1.8e-35 152.9 143 62.9
ClCG02G006290 Citrullus lanatus HOM05D000049 ORTHO05D008785 3.1e-35 152.1 146 64.4
Aa31LG2G16660 Aethionema arabicum HOM05D000049 ORTHO05D008785 4.1e-35 151.8 149 60.4
CiPaw.05G010600 Carya illinoinensis HOM05D000049 ORTHO05D008785 4.1e-35 151.8 99 79.8
TWI31G0015 Tripterygium wilfordii HOM05D000049 ORTHO05D008785 4.1e-35 151.8 144 62.5
Dinv42184 Davidia involucrata HOM05D000049 ORTHO05D008785 5.4e-35 151.4 135 63.7
Eucgr.H03224 Eucalyptus grandis HOM05D000049 ORTHO05D008785 5.4e-35 151.4 147 61.9
Nn1g04714 Nelumbo nucifera HOM05D000049 ORTHO05D008785 5.4e-35 151.4 113 73.5
Potri.009G096800 Populus trichocarpa HOM05D000049 ORTHO05D008785 7.0e-35 151.0 144 59.0
RcHm_v2.0_Chr6g0255531 Rosa chinensis HOM05D000049 ORTHO05D008785 9.2e-35 150.6 143 62.9
AUR62010281 Chenopodium quinoa HOM05D000049 ORTHO05D008785 1.2e-34 150.2 144 58.3
Oeu010393.1 Olea europaea HOM05D000049 ORTHO05D008785 1.2e-34 150.2 145 60.0
FAN20G0640 Fragaria x ananassa HOM05D000049 ORTHO05D008785 1.6e-34 149.8 143 61.5
Sc08g0001450 Simmondsia chinensis HOM05D000049 ORTHO05D008785 1.6e-34 149.8 144 59.7
arahy.Tifrunner.gnm1.ann1.MU25MQ Arachis hypogaea HOM05D000049 ORTHO05D008785 2.0e-34 149.4 97 78.4
Cc02_g19180 Coffea canephora HOM05D000049 ORTHO05D008785 2.0e-34 149.4 144 59.7
Potri.001G301100 Populus trichocarpa HOM05D000049 ORTHO05D008785 2.0e-34 149.4 144 61.1
Sabra16G0189300 Salix brachista HOM05D000049 ORTHO05D008785 2.0e-34 149.4 148 60.8
CiPaw.06G170000 Carya illinoinensis HOM05D000049 ORTHO05D008785 3.5e-34 148.7 143 64.3
Oeu018599.1 Olea europaea HOM05D000049 ORTHO05D008785 2.3e-33 146.0 95 80.0
Sed0018040 Sechium edule HOM05D000049 ORTHO05D008785 2.3e-33 146.0 143 60.1
Migut.N01171 Erythranthe guttata HOM05D000049 ORTHO05D008785 2.9e-33 145.6 137 62.8
Actinidia27967 Actinidia chinensis HOM05D000049 ORTHO05D008785 3.8e-33 145.2 100 77.0
CSS0023695 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 5.0e-33 144.8 103 76.7
CAN.G1231.12 Capsicum annuum HOM05D000049 ORTHO05D008785 6.6e-33 144.4 145 60.0
SGA_v2.0_scaffold393G50708 Striga asiatica HOM05D000049 ORTHO05D008785 6.6e-33 144.4 105 74.3
THA.LOC104819560 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 8.6e-33 144.1 152 59.9
HanXRQChr03g0070281 Helianthus annuus HOM05D000049 ORTHO05D008785 1.1e-32 143.7 102 73.5
SalBow3G3686 Salvia bowleyana HOM05D000049 ORTHO05D008785 1.1e-32 143.7 118 71.2
Solyc01g107660.3 Solanum lycopersicum HOM05D000049 ORTHO05D008785 1.5e-32 143.3 145 58.6
AT4G34190 Arabidopsis thaliana HOM05D000049 ORTHO05D008785 1.9e-32 142.9 147 58.5
Thhalv10026482m.g Eutrema salsugineum HOM05D000049 ORTHO05D008785 1.9e-32 142.9 155 58.1
PGSC0003DMG400025866 Solanum tuberosum HOM05D000049 ORTHO05D008785 2.5e-32 142.5 145 60.0
Nitab4.5_0002815g0100 Nicotiana tabacum HOM05D000049 ORTHO05D008785 7.3e-32 141.0 145 60.0
Peaxi162Scf00016g02238 Petunia axillaris HOM05D000049 ORTHO05D008785 9.5e-32 140.6 145 60.7
A01p04250 Brassica napus HOM05D000049 ORTHO05D008785 1.2e-31 140.2 148 56.8
BraA01t00414Z Brassica rapa HOM05D000049 ORTHO05D008785 1.2e-31 140.2 148 56.8
C01p04640 Brassica napus HOM05D000049 ORTHO05D008785 1.6e-31 139.8 148 56.8
BolC1t00447H Brassica oleracea HOM05D000049 ORTHO05D008785 1.6e-31 139.8 148 56.8
Carub.0007s0619 Capsella rubella HOM05D000049 ORTHO05D008785 1.6e-31 139.8 149 56.4
CDE02G2484 Ceratophyllum demersum HOM05D000049 ORTHO05D008785 1.6e-31 139.8 102 71.6
PGR042G1228 Punica granatum HOM05D000049 ORTHO05D008785 1.6e-31 139.8 147 59.9
AL7G17120 Arabidopsis lyrata HOM05D000049 ORTHO05D008785 2.1e-31 139.4 151 58.9
BcaNung03801 Brassica carinata HOM05D000049 ORTHO05D008785 2.1e-31 139.4 154 57.1
TAR381G1170 Trochodendron aralioides HOM05D000049 ORTHO05D008785 3.6e-31 138.7 111 66.7
CARHR242610 Cardamine hirsuta HOM05D000049 ORTHO05D008785 4.7e-31 138.3 154 59.7
ECA240G2980 Erigeron canadensis HOM05D000049 ORTHO05D000027 6.1e-31 137.9 143 55.2
MSTRG.5347 Avicennia marina HOM05D000049 ORTHO05D008785 4.0e-30 135.2 103 67.0
Migut.B00381 Erythranthe guttata HOM05D000049 ORTHO05D008785 1.2e-29 133.7 155 49.7
Sp7g31960 Schrenkiella parvula HOM05D000049 ORTHO05D008785 1.5e-29 133.3 153 55.6
THA.LOC104807247 Tarenaya hassleriana HOM05D000049 ORTHO05D008785 4.4e-29 131.7 151 55.0
Nitab4.5_0005392g0020 Nicotiana tabacum HOM05D000049 ORTHO05D008785 7.5e-29 131.0 145 57.9
FAN24G0707 Fragaria x ananassa HOM05D000049 ORTHO05D008785 2.2e-28 129.4 130 58.5
unitig_22.g6845 Utricularia gibba HOM05D000049 ORTHO05D008785 2.9e-28 129.0 82 79.3
HPP92_004768 Vanilla planifolia HOM05D000049 ORTHO05D008785 2.9e-28 129.0 102 62.7
CSS0024818 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 2.4e-27 125.9 132 59.8
CSS0021501 Camellia sinensis var. sinensis HOM05D000049 ORTHO05D008785 4.1e-27 125.2 131 58.8
FAN15G1433 Fragaria x ananassa HOM05D000049 ORTHO05D008785 5.4e-27 124.8 130 56.2
PSO210G6109 Papaver somniferum HOM05D000049 ORTHO05D008785 7.0e-27 124.4 114 60.5
DCAR_030806 Daucus carota HOM05D000049 ORTHO05D008785 1.2e-26 123.6 79 74.7
PSO170G1282 Papaver somniferum HOM05D000049 ORTHO05D008785 6.6e-25 117.9 109 63.3
MELO3C018482.2 Cucumis melo HOM05D000049 ORTHO05D000027 1.1e-24 117.1 91 70.3
SEGI_21574 Sequoiadendron giganteum HOM05D000049 ORTHO05D008785 1.2e-23 113.6 76 71.1
Hund00143 Selenicereus undatus HOM05D000049 ORTHO05D008785 2.0e-21 106.3 73 74.0
Dinv15757 Davidia involucrata HOM05D000049 ORTHO05D008785 2.6e-21 105.9 116 51.7
TAR376G0829 Trochodendron aralioides HOM05D000049 ORTHO05D008785 9.8e-21 104.0 75 73.3
Sabra09G0074400 Salix brachista HOM05D000049 ORTHO05D008785 8.3e-20 100.9 131 46.6
vmacro19520 Vaccinium macrocarpon HOM05D000049 ORTHO05D008785 3.2e-19 99.0 113 50.4
Zm00001eb048670 Zea mays HOM05D000049 ORTHO05D008785 2.7e-18 95.9 87 54.0
Mapoly0006s0145 Marchantia polymorpha HOM05D000049 ORTHO05D008785 6.6e-17 91.3 135 44.4
Pp3c1_21810 Physcomitrium patens HOM05D000049 ORTHO05D008785 9.5e-16 87.4 89 49.4
Os11g0621400 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 6.2e-15 84.7 86 48.8
FAN27G0752 Fragaria x ananassa HOM05D000049 ORTHO05D000027 8.1e-15 84.3 109 49.5
TAR628G1275 Trochodendron aralioides HOM05D000049 ORTHO05D008785 5.2e-14 81.6 69 62.3
ATR0691G295 Amborella trichopoda HOM05D000049 ORTHO05D008785 6.8e-14 81.3 55 78.2
SMO340G0196 Selaginella moellendorffii HOM05D000049 ORTHO05D008785 6.8e-14 81.3 78 52.6
AagrBONN_evm.TU.Sc2ySwM_117.2783 Anthoceros agrestis HOM05D000049 ORTHO05D008785 2.2e-12 76.3 82 46.3
SalBow6G4602 Salvia bowleyana HOM05D010989 ORTHO05D013112 8.3e-12 74.3 84 57.1
COL.COLO4_15744 Corchorus olitorius HOM05D001416 ORTHO05D002549 2.5e-08 62.8 32 93.8
Os10g0395200 Oryza sativa ssp. japonica HOM05D000049 ORTHO05D008785 1.4e-06 57.0 69 47.8


User provided reference genes

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