Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G112000 Glycine max HOM05D013451 ORTHO05D009679 8.9e-107 390.2 185 100.0
TPR.G14615 Trifolium pratense HOM05D013451 ORTHO05D009679 8.5e-25 117.9 201 34.3
TPR.G11122 Trifolium pratense HOM05D000017 ORTHO05D000013 2.7e-23 112.8 200 33.5
Medtr4g055480 Medicago truncatula HOM05D024077 ORTHO05D009679 8.0e-23 111.3 178 33.7
VMungo1080G0784 Vigna mungo HOM05D013451 ORTHO05D009679 3.0e-22 109.4 177 32.8
TPR.G36775 Trifolium pratense HOM05D000017 ORTHO05D000013 2.2e-20 103.2 179 33.0
Ca_22902_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 8.2e-20 101.3 204 30.4
TPR.G40010 Trifolium pratense HOM05D013451 ORTHO05D009679 1.8e-19 100.1 141 38.3
TPR.G35471 Trifolium pratense HOM05D000017 ORTHO05D009679 1.0e-17 94.4 145 37.2
Medtr8g464080 Medicago truncatula HOM05D023704 ORTHO05D020438 8.5e-17 91.3 196 32.1
Phvul.005G064300 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 1.9e-16 90.1 145 36.6
TPR.G15353 Trifolium pratense HOM05D000017 ORTHO05D000013 1.9e-16 90.1 210 31.4
TPR.G31011 Trifolium pratense HOM05D000017 ORTHO05D000013 9.4e-16 87.8 150 33.3
Ca_03505_v3 Cicer arietinum L. HOM05D008341 ORTHO05D009679 2.1e-15 86.7 111 36.9
TPR.G26350 Trifolium pratense HOM05D000017 ORTHO05D000013 2.1e-15 86.7 165 32.7
Ca_12624_v3 Cicer arietinum L. HOM05D010632 ORTHO05D007253 2.3e-14 83.2 181 29.8
TWI09G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-13 79.7 210 24.8
TWI31G0342 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-13 79.7 210 24.8
TWI75G0917 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.6e-13 79.7 210 24.8
TPR.G1787 Trifolium pratense HOM05D000017 ORTHO05D000013 3.4e-13 79.3 202 29.2
VMungo1215G1165 Vigna mungo HOM05D000017 ORTHO05D000013 4.4e-13 79.0 192 25.5
TWI36G0864 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 5.7e-13 78.6 210 24.8
Lj6g0013797 Lotus japonicus HOM05D000017 ORTHO05D000013 7.5e-13 78.2 191 29.3
arahy.Tifrunner.gnm1.ann1.20XN21 Arachis hypogaea HOM05D030406 ORTHO05D009679 1.7e-12 77.0 109 33.9
arahy.Tifrunner.gnm1.ann1.31P59F Arachis hypogaea HOM05D000017 ORTHO05D000013 2.2e-12 76.6 184 27.2
ClCG06G006800 Citrullus lanatus HOM05D000176 ORTHO05D000013 3.7e-12 75.9 202 25.2
TWI75G0784 Tripterygium wilfordii HOM05D000017 ORTHO05D007253 3.7e-12 75.9 210 24.3
Phvul.005G097700 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 1.4e-11 73.9 56 58.9
QL08p013497 Quercus lobata HOM05D000017 ORTHO05D007253 2.4e-11 73.2 214 24.8
Ca_02565_v3 Cicer arietinum L. HOM05D007471 ORTHO05D009481 4.1e-11 72.4 150 30.7
TPR.G18584 Trifolium pratense HOM05D000017 ORTHO05D007253 4.1e-11 72.4 140 32.9
Medtr1g088620 Medicago truncatula HOM05D000483 ORTHO05D000158 5.4e-11 72.0 99 34.3
QL08p006036 Quercus lobata HOM05D000017 ORTHO05D007253 5.4e-11 72.0 214 24.3
SHI45280 Sapria himalayana HOM05D000017 ORTHO05D000013 7.0e-11 71.6 200 24.5
Phvul.005G052300 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 1.6e-10 70.5 55 52.7
QL08p005699 Quercus lobata HOM05D000017 ORTHO05D007253 1.6e-10 70.5 213 23.5
Phvul.007G147700 Phaseolus vulgaris HOM05D013451 ORTHO05D009679 4.5e-10 68.9 54 57.4
Dinv03568 Davidia involucrata HOM05D000017 ORTHO05D009679 5.9e-10 68.6 197 25.4
TPR.G9026 Trifolium pratense HOM05D013451 ORTHO05D009679 2.9e-09 66.2 114 33.3
Dinv16753 Davidia involucrata HOM05D008341 ORTHO05D009679 3.8e-09 65.9 130 30.0
Ca_06856_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 5.0e-09 65.5 148 28.4
Dinv20712 Davidia involucrata HOM05D008341 ORTHO05D009679 6.5e-09 65.1 130 29.2
arahy.Tifrunner.gnm1.ann1.16AZZ7 Arachis hypogaea HOM05D030406 ORTHO05D009679 1.1e-08 64.3 97 35.1
Sopen02g035490 Solanum pennellii HOM05D005268 ORTHO05D007253 1.1e-08 64.3 202 21.8
Sopen07g005140 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-08 64.3 202 21.8
Lj6g0025034 Lotus japonicus HOM05D000017 ORTHO05D000013 1.9e-08 63.5 163 27.0
VMungo0464G1406 Vigna mungo HOM05D013451 ORTHO05D009679 2.5e-08 63.2 57 45.6
EL10Ac6g14585 Beta vulgaris HOM05D000017 ORTHO05D007253 3.2e-08 62.8 203 26.1
Dinv06620 Davidia involucrata HOM05D008341 ORTHO05D009679 1.2e-07 60.8 122 31.1
Dinv23640 Davidia involucrata HOM05D008341 ORTHO05D009679 1.6e-07 60.5 115 29.6
Ca_14871_v3 Cicer arietinum L. HOM05D000017 ORTHO05D000013 2.1e-07 60.1 120 28.3
Dinv09463 Davidia involucrata HOM05D007975 ORTHO05D010011 2.1e-07 60.1 126 30.2
QL02p062658 Quercus lobata HOM05D000017 ORTHO05D009679 2.1e-07 60.1 214 23.8
CSS0008184 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.7e-07 58.9 206 22.8
Dinv24632 Davidia involucrata HOM05D008341 ORTHO05D009679 4.7e-07 58.9 131 28.2
Ca_24094_v3 Cicer arietinum L. HOM05D008341 ORTHO05D009679 6.1e-07 58.5 91 37.4
Medtr2g018850 Medicago truncatula HOM05D000017 ORTHO05D000013 6.1e-07 58.5 168 27.4
CSS0001578 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-07 58.2 200 23.0
CSS0007981 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-07 58.2 200 23.0
CSS0014296 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-07 58.2 200 23.0
CSS0025680 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-07 58.2 206 22.8
CSS0042409 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 8.0e-07 58.2 200 23.0
Manes.06G036167 Manihot esculenta HOM05D008341 ORTHO05D009679 2.3e-06 56.6 99 32.3
CSS0015352 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 4.0e-06 55.8 200 22.5
CSS0007859 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-06 55.5 193 23.3
CSS0024128 Camellia sinensis var. sinensis HOM05D000017 ORTHO05D000013 5.2e-06 55.5 190 22.1
CSS0026252 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-06 55.5 193 23.3
CSS0035420 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 5.2e-06 55.5 193 23.3
ECA240G4628 Erigeron canadensis HOM05D000017 ORTHO05D000013 5.2e-06 55.5 198 24.7
CSS0006340 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.8e-06 55.1 193 23.3
QL10p055041 Quercus lobata HOM05D000017 ORTHO05D009679 6.8e-06 55.1 214 22.4


User provided reference genes

Program Settings