Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G103600 Glycine max HOM05D014627 ORTHO05D016626 1.6e-52 209.1 105 100.0
Glyma.10G285400 Glycine max HOM05D014627 ORTHO05D016626 1.5e-39 166.0 99 84.8
TPR.G4032 Trifolium pratense HOM05D014627 ORTHO05D016626 1.2e-36 156.4 105 77.1
Glyma.20G103500 Glycine max HOM05D014627 ORTHO05D016626 6.1e-36 154.1 103 79.6
Medtr1g114340 Medicago truncatula HOM05D014627 ORTHO05D016626 3.7e-33 144.8 105 72.4
TPR.G4088 Trifolium pratense HOM05D014627 ORTHO05D016626 3.7e-33 144.8 105 71.4
Lj5g0017337 Lotus japonicus HOM05D014627 ORTHO05D016626 7.0e-32 140.6 107 72.0
arahy.Tifrunner.gnm1.ann1.Y2ZDKP Arachis hypogaea HOM05D014627 ORTHO05D016626 1.6e-20 102.8 99 54.5
Glyma.10G285500 Glycine max HOM05D014627 ORTHO05D016626 1.0e-19 100.1 68 80.9
arahy.Tifrunner.gnm1.ann1.GYS9T6 Arachis hypogaea HOM05D014627 ORTHO05D016626 4.4e-18 94.7 100 53.0
Prupe.1G533500 Prunus persica HOM05D009460 ORTHO05D011009 4.0e-11 71.6 110 38.2
Thecc.08G072100 Theobroma cacao HOM05D009460 ORTHO05D011009 8.3e-09 63.9 105 40.0
Haze_22472 Corylus avellana HOM05D009460 ORTHO05D011009 3.5e-07 58.5 111 36.0
Thecc.08G072200 Theobroma cacao HOM05D009460 ORTHO05D011009 3.5e-07 58.5 105 39.0
CiPaw.08G056400 Carya illinoinensis HOM05D009460 ORTHO05D011009 7.7e-07 57.4 110 40.0
Gohir.A06G031700 Gossypium hirsutum HOM05D009460 ORTHO05D011009 1.3e-06 56.6 106 35.8
Gohir.D06G030900 Gossypium hirsutum HOM05D009460 ORTHO05D011009 1.3e-06 56.6 106 38.7
COL.COLO4_35259 Corchorus olitorius HOM05D009460 ORTHO05D011009 5.0e-06 54.7 105 35.2
Gorai.010G034000 Gossypium raimondii HOM05D009460 ORTHO05D011009 8.6e-06 53.9 106 36.8


User provided reference genes

Program Settings