Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G096402 Glycine max HOM05D006337 ORTHO05D008050 5.8e-71 270.8 137 100.0
Glyma.10G146600 Glycine max HOM05D006337 ORTHO05D008050 3.3e-42 175.3 118 78.8
Ca_10177_v3 Cicer arietinum L. HOM05D006337 ORTHO05D008050 4.1e-40 168.3 118 74.6
Psat6g152760 Pisum sativum HOM05D006337 ORTHO05D008050 7.7e-39 164.1 118 72.9
VMungo0720G2751 Vigna mungo HOM05D006337 ORTHO05D008050 1.0e-38 163.7 118 72.0
Medtr1g084140 Medicago truncatula HOM05D006337 ORTHO05D008050 2.9e-38 162.2 118 72.0
Lj5g0023698 Lotus japonicus HOM05D006337 ORTHO05D008050 5.0e-38 161.4 118 71.2
Phvul.007G201800 Phaseolus vulgaris HOM05D006337 ORTHO05D008050 1.1e-37 160.2 118 72.0
TPR.G2638 Trifolium pratense HOM05D006337 ORTHO05D008050 1.4e-37 159.8 118 70.3
Lalb_Chr06g0167461 Lupinus albus HOM05D006337 ORTHO05D008050 2.5e-37 159.1 118 68.6
arahy.Tifrunner.gnm1.ann1.JG44AF Arachis hypogaea HOM05D006337 ORTHO05D008050 7.2e-37 157.5 118 68.6
arahy.Tifrunner.gnm1.ann1.T92ZT6 Arachis hypogaea HOM05D006337 ORTHO05D008050 2.7e-36 155.6 118 67.8
Dinv30899 Davidia involucrata HOM05D006337 ORTHO05D008050 1.5e-34 149.8 118 65.3
Actinidia35517 Actinidia chinensis HOM05D006337 ORTHO05D008050 7.4e-34 147.5 118 65.3
CSS0010424 Camellia sinensis var. sinensis HOM05D006337 ORTHO05D008050 7.4e-34 147.5 118 66.1
Migut.B00957 Erythranthe guttata HOM05D006337 ORTHO05D008050 9.7e-34 147.1 133 57.9
Oeu052934.2 Olea europaea HOM05D006337 ORTHO05D008050 8.2e-33 144.1 118 62.7
CAN.G1076.22 Capsicum annuum HOM05D006337 ORTHO05D008050 2.4e-32 142.5 118 61.0
SGA_v2.0_scaffold5G02894 Striga asiatica HOM05D006337 ORTHO05D008050 3.1e-32 142.1 118 60.2
Prupe.6G312300 Prunus persica HOM05D006337 ORTHO05D008050 4.1e-32 141.7 118 66.1
Sc09g0002620 Simmondsia chinensis HOM05D006337 ORTHO05D008050 5.3e-32 141.4 118 63.6
Atru.chr2.356 Acer truncatum HOM05D006337 ORTHO05D008050 7.0e-32 141.0 118 64.4
AUR62006741 Chenopodium quinoa HOM05D006337 ORTHO05D008050 9.1e-32 140.6 118 60.2
Cc02_g35170 Coffea canephora HOM05D006337 ORTHO05D008050 9.1e-32 140.6 118 62.7
Manes.08G110700 Manihot esculenta HOM05D006337 ORTHO05D008050 9.1e-32 140.6 118 62.7
PGSC0003DMG400002762 Solanum tuberosum HOM05D006337 ORTHO05D008050 1.2e-31 140.2 118 61.0
Hma1.2p1_0008F-1.1_g005550 Hydrangea macrophylla HOM05D006337 ORTHO05D008050 2.0e-31 139.4 106 67.9
MD04G1193000 Malus domestica HOM05D006337 ORTHO05D008050 2.0e-31 139.4 118 64.4
Ah.03g134550 Amaranthus hybridus HOM05D006337 ORTHO05D008050 2.6e-31 139.0 118 59.3
AUR62000385 Chenopodium quinoa HOM05D006337 ORTHO05D008050 2.6e-31 139.0 118 59.3
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 2.6e-31 139.0 118 61.9
SalBow3G0030 Salvia bowleyana HOM05D006337 ORTHO05D008050 3.5e-31 138.7 118 60.2
Eucgr.L00261 Eucalyptus grandis HOM05D006337 ORTHO05D008050 4.5e-31 138.3 118 61.9
Cpa.g.sc48.168 Carica papaya HOM05D006337 ORTHO05D008050 7.7e-31 137.5 118 62.7
Potri.005G012900 Populus trichocarpa HOM05D006337 ORTHO05D008050 7.7e-31 137.5 106 67.0
QL03p014086 Quercus lobata HOM05D006337 ORTHO05D008050 7.7e-31 137.5 118 61.9
Solyc01g100610.3 Solanum lycopersicum HOM05D006337 ORTHO05D008050 7.7e-31 137.5 118 60.2
Sopen01g044110 Solanum pennellii HOM05D006337 ORTHO05D008050 7.7e-31 137.5 118 60.2
EL10Ac4g09464 Beta vulgaris HOM05D006337 ORTHO05D008050 1.0e-30 137.1 95 70.5
MD12G1205200 Malus domestica HOM05D006337 ORTHO05D008050 1.0e-30 137.1 106 69.8
Nitab4.5_0001338g0110 Nicotiana tabacum HOM05D006337 ORTHO05D008050 1.0e-30 137.1 118 61.0
Aqoxy5G02944 Aquilegia oxysepala HOM05D006337 ORTHO05D008050 1.3e-30 136.7 118 61.0
Gohir.A08G205300 Gossypium hirsutum HOM05D006337 ORTHO05D008050 1.3e-30 136.7 118 61.9
Gohir.D08G222400 Gossypium hirsutum HOM05D006337 ORTHO05D008050 1.3e-30 136.7 118 61.9
Gorai.004G236200 Gossypium raimondii HOM05D006337 ORTHO05D008050 1.3e-30 136.7 118 61.9
CANSAT54G1309 Cannabis sativa HOM05D006337 ORTHO05D008050 1.7e-30 136.3 118 61.9
TAR362G0469 Trochodendron aralioides HOM05D006337 ORTHO05D008050 2.2e-30 136.0 118 61.0
Rhsim11G0096400 Rhododendron simsii HOM05D006337 ORTHO05D008050 2.9e-30 135.6 118 62.7
COL.COLO4_05544 Corchorus olitorius HOM05D006337 ORTHO05D008050 3.8e-30 135.2 118 61.9
Haze_04055 Corylus avellana HOM05D006337 ORTHO05D008050 5.0e-30 134.8 118 61.0
FvH4_6g07510 Fragaria vesca HOM05D006337 ORTHO05D008050 6.5e-30 134.4 118 62.7
FAN09G0993 Fragaria x ananassa HOM05D006337 ORTHO05D008050 6.5e-30 134.4 118 62.7
FAN14G3073 Fragaria x ananassa HOM05D006337 ORTHO05D008050 6.5e-30 134.4 118 62.7
RcHm_v2.0_Chr3g0457221 Rosa chinensis HOM05D006337 ORTHO05D008050 6.5e-30 134.4 118 62.7
Thecc.05G323900 Theobroma cacao HOM05D006337 ORTHO05D008050 6.5e-30 134.4 118 61.9
Ciclev10000649m.g Citrus clementina HOM05D006337 ORTHO05D008050 8.5e-30 134.0 118 63.6
MBI19_g03243_MAGBIO Magnolia biondii HOM05D006337 ORTHO05D008050 8.5e-30 134.0 119 63.0
Nitab4.5_0004525g0030 Nicotiana tabacum HOM05D006337 ORTHO05D008050 8.5e-30 134.0 116 61.2
CDE02G2949 Ceratophyllum demersum HOM05D006337 ORTHO05D008050 1.1e-29 133.7 119 62.2
Lj5C328G3 Lonicera japonica HOM05D006337 ORTHO05D008050 1.1e-29 133.7 118 61.0
SGA_v2.0_scaffold4G01972 Striga asiatica HOM05D006337 ORTHO05D008050 1.1e-29 133.7 118 60.2
ClCG02G014850 Citrullus lanatus HOM05D006337 ORTHO05D008050 1.9e-29 132.9 119 58.8
FAN02G2852 Fragaria x ananassa HOM05D006337 ORTHO05D008050 1.9e-29 132.9 118 61.9
CsaV3_2G007160 Cucumis sativus L. HOM05D006337 ORTHO05D008050 2.5e-29 132.5 119 59.7
PSO210G5840 Papaver somniferum HOM05D006337 ORTHO05D008050 2.5e-29 132.5 118 60.2
Sed0024424 Sechium edule HOM05D006337 ORTHO05D008050 5.5e-29 131.3 119 59.7
MELO3C004177.2 Cucumis melo HOM05D006337 ORTHO05D008050 7.2e-29 131.0 119 58.8
PSO761G0398 Papaver somniferum HOM05D006337 ORTHO05D008050 9.4e-29 130.6 118 59.3
Sed0025162 Sechium edule HOM05D006337 ORTHO05D008050 9.4e-29 130.6 119 58.8
Gohir.D13G115300 Gossypium hirsutum HOM05D006337 ORTHO05D008050 2.1e-28 129.4 118 60.2
Gorai.013G129700 Gossypium raimondii HOM05D006337 ORTHO05D008050 2.1e-28 129.4 118 60.2
TWI56G1055 Tripterygium wilfordii HOM05D006337 ORTHO05D008050 2.1e-28 129.4 106 64.2
Gohir.A13G112400 Gossypium hirsutum HOM05D006337 ORTHO05D008050 4.7e-28 128.3 132 57.6
Peaxi162Scf01061g00122 Petunia axillaris HOM05D006337 ORTHO05D008050 4.7e-28 128.3 118 57.6
GSVIVG01031249001 Vitis vinifera HOM05D006337 ORTHO05D008050 4.7e-28 128.3 95 67.4
PGR083G2894 Punica granatum HOM05D006337 ORTHO05D008050 3.9e-27 125.2 120 56.7
Lsat_1_v5_gn_8_116121 Lactuca sativa HOM05D006337 ORTHO05D008050 5.2e-27 124.8 118 56.8
THA.LOC104821740 Tarenaya hassleriana HOM05D006337 ORTHO05D008050 5.2e-27 124.8 118 55.9
DCAR_005423 Daucus carota HOM05D006337 ORTHO05D008050 1.5e-26 123.2 118 55.1
HanXRQChr15g0486571 Helianthus annuus HOM05D006337 ORTHO05D008050 1.5e-26 123.2 118 56.8
Nn4g25566 Nelumbo nucifera HOM05D006337 ORTHO05D008050 1.5e-26 123.2 118 52.5
THA.LOC104802775 Tarenaya hassleriana HOM05D006337 ORTHO05D008050 2.0e-26 122.9 118 54.2
HanXRQChr09g0258701 Helianthus annuus HOM05D006337 ORTHO05D008050 3.3e-26 122.1 118 55.9
Sabra05G0009100 Salix brachista HOM05D006337 ORTHO05D008050 4.4e-26 121.7 113 57.5
Sabra05G0020500 Salix brachista HOM05D006337 ORTHO05D008050 4.4e-26 121.7 113 57.5
CARHR186710 Cardamine hirsuta HOM05D006337 ORTHO05D008050 5.7e-26 121.3 118 55.1
Aa31LG11G9810 Aethionema arabicum HOM05D006337 ORTHO05D008050 9.7e-26 120.6 118 51.7
Thhalv10003867m.g Eutrema salsugineum HOM05D006337 ORTHO05D008050 9.7e-26 120.6 118 53.4
TWI12G0276 Tripterygium wilfordii HOM05D006337 ORTHO05D008050 1.3e-25 120.2 95 65.3
ECA232G4422 Erigeron canadensis HOM05D006337 ORTHO05D008050 1.7e-25 119.8 118 56.8
Sp2g21170 Schrenkiella parvula HOM05D006337 ORTHO05D008050 2.8e-25 119.0 118 52.5
AT5G26820 Arabidopsis thaliana HOM05D006337 ORTHO05D008050 3.7e-25 118.6 106 56.6
C02p58590 Brassica napus HOM05D006337 ORTHO05D008050 1.1e-24 117.1 118 52.5
BolC2t11920H Brassica oleracea HOM05D006337 ORTHO05D008050 1.1e-24 117.1 118 52.5
BraA02t08870Z Brassica rapa HOM05D006337 ORTHO05D008050 1.1e-24 117.1 118 52.5
Nn3g21731 Nelumbo nucifera HOM05D006337 ORTHO05D008050 1.4e-24 116.7 118 52.5
BcaNung06218 Brassica carinata HOM05D006337 ORTHO05D008050 2.4e-24 115.9 118 51.7
A02p39000 Brassica napus HOM05D006337 ORTHO05D008050 2.4e-24 115.9 118 51.7
HPP92_010606 Vanilla planifolia HOM05D006337 ORTHO05D008050 2.4e-24 115.9 119 52.1
AL6G38700 Arabidopsis lyrata HOM05D006337 ORTHO05D008050 4.1e-24 115.2 106 54.7
Carub.0006s2448 Capsella rubella HOM05D006337 ORTHO05D008050 5.3e-24 114.8 106 56.6
BcaC03g17830 Brassica carinata HOM05D006337 ORTHO05D008050 7.0e-24 114.4 118 51.7
Os12g0562100 Oryza sativa ssp. japonica HOM05D006337 ORTHO05D008050 2.0e-23 112.8 107 54.2
ATR0693G447 Amborella trichopoda HOM05D006337 ORTHO05D008050 2.6e-23 112.5 120 53.3
SEGI_32498 Sequoiadendron giganteum HOM05D006337 ORTHO05D008050 3.5e-23 112.1 121 53.7
CDE09G1129 Ceratophyllum demersum HOM05D006337 ORTHO05D008050 5.9e-23 111.3 119 50.4
unitig_8.g4946 Utricularia gibba HOM05D006337 ORTHO05D008050 3.8e-22 108.6 125 49.6
CiPaw.07G030200 Carya illinoinensis HOM05D006337 ORTHO05D008050 1.4e-19 100.1 99 54.5
Dinv24464 Davidia involucrata HOM05D006337 ORTHO05D008050 9.1e-16 87.4 102 50.0
Pp3c25_630 Physcomitrium patens HOM05D006337 ORTHO05D008050 1.6e-15 86.7 109 45.0
AagrBONN_evm.TU.Sc2ySwM_368.2655 Anthoceros agrestis HOM05D006337 ORTHO05D008050 1.0e-14 84.0 121 38.8
Os05g0131500 Oryza sativa ssp. japonica HOM05D006337 ORTHO05D008050 1.3e-14 83.6 88 46.6
SMO118G0422 Selaginella moellendorffii HOM05D006337 ORTHO05D008050 2.9e-14 82.4 94 45.7
Mapoly0001s0146 Marchantia polymorpha HOM05D006337 ORTHO05D008050 3.2e-13 79.0 99 43.4
Pp3c25_1200 Physcomitrium patens HOM05D006337 ORTHO05D008050 9.4e-13 77.4 98 41.8
Pp3c5_21200 Physcomitrium patens HOM05D006337 ORTHO05D008050 1.8e-11 73.2 97 42.3
vmacro01570 Vaccinium macrocarpon HOM05D006337 ORTHO05D008050 3.4e-10 68.9 36 83.3
Hund07310 Selenicereus undatus HOM05D006337 ORTHO05D008050 7.5e-10 67.8 38 76.3


User provided reference genes

Program Settings