Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G094800 Glycine max HOM05D001237 ORTHO05D009110 2.2e-128 462.2 226 100.0
Glyma.01G147700 Glycine max HOM05D001237 ORTHO05D009110 1.4e-125 453.0 225 98.2
Phvul.002G132200 Phaseolus vulgaris HOM05D001237 ORTHO05D009110 5.0e-120 434.5 226 93.4
VMungo1215G0366 Vigna mungo HOM05D001237 ORTHO05D000217 7.2e-119 430.6 226 92.9
Lj2g0015654 Lotus japonicus HOM05D001237 ORTHO05D009110 3.6e-118 428.3 226 91.6
TPR.G29137 Trifolium pratense HOM05D001237 ORTHO05D009110 1.5e-116 422.9 226 90.7
Ca_25144_v3 Cicer arietinum L. HOM05D001237 ORTHO05D000217 2.6e-116 422.2 226 91.2
Lalb_Chr05g0215521 Lupinus albus HOM05D001237 ORTHO05D009110 9.8e-116 420.2 224 91.1
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 7.0e-114 414.1 224 88.8
Medtr5g027220 Medicago truncatula HOM05D001237 ORTHO05D009110 2.8e-110 402.1 223 87.0
Gorai.004G179700 Gossypium raimondii HOM05D001237 ORTHO05D009110 2.3e-109 399.1 226 86.3
Gohir.A08G151200 Gossypium hirsutum HOM05D001237 ORTHO05D009110 2.6e-108 395.6 226 85.8
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 1.3e-107 393.3 226 83.6
Nitab4.5_0002735g0030 Nicotiana tabacum HOM05D001237 ORTHO05D009110 4.9e-107 391.3 226 84.1
Prupe.5G022700 Prunus persica HOM05D001237 ORTHO05D009110 4.9e-107 391.3 226 84.5
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 6.4e-107 391.0 226 83.6
Potri.003G100300 Populus trichocarpa HOM05D001237 ORTHO05D009110 6.4e-107 391.0 226 84.1
PGR042G3955 Punica granatum HOM05D001237 ORTHO05D009110 6.4e-107 391.0 226 83.6
DCAR_024946 Daucus carota HOM05D001577 ORTHO05D009110 8.3e-107 390.6 226 84.1
Oeu038592.1 Olea europaea HOM05D001237 ORTHO05D009110 1.1e-106 390.2 226 86.3
CAN.G773.2 Capsicum annuum HOM05D001237 ORTHO05D009110 1.9e-106 389.4 226 83.6
GSVIVG01022633001 Vitis vinifera HOM05D001237 ORTHO05D009110 2.4e-106 389.0 226 85.0
FAN18G3541 Fragaria x ananassa HOM05D001237 ORTHO05D009110 3.2e-106 388.7 226 83.6
Nitab4.5_0001033g0010 Nicotiana tabacum HOM05D001237 ORTHO05D009110 3.2e-106 388.7 226 83.2
Thecc.03G315000 Theobroma cacao HOM05D001237 ORTHO05D009110 4.1e-106 388.3 226 83.6
FAN18G4185 Fragaria x ananassa HOM05D001237 ORTHO05D009110 9.2e-106 387.1 226 83.2
Duzib084G0831 Durio zibethinus HOM05D001237 ORTHO05D009110 1.2e-105 386.7 226 83.2
FvH4_5g23760 Fragaria vesca HOM05D001237 ORTHO05D009110 1.2e-105 386.7 226 83.2
FAN08G1241 Fragaria x ananassa HOM05D001237 ORTHO05D009110 2.7e-105 385.6 226 82.7
CANSAT25G2402 Cannabis sativa HOM05D001237 ORTHO05D009110 3.5e-105 385.2 226 83.2
CiPaw.12G070700 Carya illinoinensis HOM05D001237 ORTHO05D009110 4.6e-105 384.8 226 84.1
PSO782G3536 Papaver somniferum HOM05D001237 ORTHO05D009110 4.6e-105 384.8 224 83.0
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 4.6e-105 384.8 226 82.7
Migut.E01337 Erythranthe guttata HOM05D001237 ORTHO05D009110 7.8e-105 384.0 226 83.6
EL10Ac5g11946 Beta vulgaris HOM05D001237 ORTHO05D009110 1.3e-104 383.3 226 81.9
Manes.17G008800 Manihot esculenta HOM05D001237 ORTHO05D009110 1.3e-104 383.3 226 82.3
RcHm_v2.0_Chr7g0213081 Rosa chinensis HOM05D001237 ORTHO05D009110 1.3e-104 383.3 226 82.3
Solyc08g075990.3 Solanum lycopersicum HOM05D001237 ORTHO05D009110 1.3e-104 383.3 226 82.3
Cfa012569 Carpinus fangiana HOM05D001237 ORTHO05D009110 1.7e-104 382.9 226 84.1
TAR629G2165 Trochodendron aralioides HOM05D001237 ORTHO05D009110 2.3e-104 382.5 226 81.4
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 3.0e-104 382.1 226 81.4
Eucgr.E01249 Eucalyptus grandis HOM05D001237 ORTHO05D009110 5.0e-104 381.3 223 82.5
Cc00_g24190 Coffea canephora HOM05D001237 ORTHO05D009110 6.6e-104 380.9 226 81.9
ECA233G0844 Erigeron canadensis HOM05D001237 ORTHO05D009110 8.6e-104 380.6 226 81.4
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 8.6e-104 380.6 226 81.0
ATR0829G072 Amborella trichopoda HOM05D001237 ORTHO05D009110 1.5e-103 379.8 226 80.5
THA.LOC104812764 Tarenaya hassleriana HOM05D001237 ORTHO05D009110 1.5e-103 379.8 226 81.4
Cpa.g.sc24.66 Carica papaya HOM05D001237 ORTHO05D009110 1.9e-103 379.4 226 81.0
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 4.3e-103 378.3 226 82.3
COL.COLO4_27340 Corchorus olitorius HOM05D001237 ORTHO05D009110 5.6e-103 377.9 225 80.9
Ah.07g201260 Amaranthus hybridus HOM05D001237 ORTHO05D009110 1.6e-102 376.3 228 79.8
AUR62007400 Chenopodium quinoa HOM05D001237 ORTHO05D009110 2.1e-102 375.9 229 80.8
CsaV3_3G001140 Cucumis sativus L. HOM05D001237 ORTHO05D009110 8.1e-102 374.0 226 81.4
Zm00001eb208900 Zea mays HOM05D001237 ORTHO05D009110 1.8e-101 372.9 226 78.3
Peaxi162Scf00408g00416 Petunia axillaris HOM05D001237 ORTHO05D009110 4.0e-101 371.7 234 79.1
Actinidia18147 Actinidia chinensis HOM05D001237 ORTHO05D009110 5.2e-101 371.3 226 80.1
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 6.8e-101 370.9 238 76.9
Sc07g0008510 Simmondsia chinensis HOM05D001237 ORTHO05D009110 6.8e-101 370.9 224 79.0
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 2.0e-100 369.4 226 80.1
AT5G48790 Arabidopsis thaliana HOM05D001237 ORTHO05D009110 3.4e-100 368.6 226 78.3
Hma1.2p1_0979F.1_g243590 Hydrangea macrophylla HOM05D001237 ORTHO05D009110 9.8e-100 367.1 238 77.7
Carub.0008s0852 Capsella rubella HOM05D001237 ORTHO05D009110 1.3e-99 366.7 226 78.3
Rhsim07G0137000 Rhododendron simsii HOM05D001237 ORTHO05D009110 1.3e-99 366.7 225 80.0
CSS0010822 Camellia sinensis var. sinensis HOM05D001237 ORTHO05D009110 1.7e-99 366.3 230 80.0
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 6.4e-99 364.4 226 77.4
Aa31LG9G15560 Aethionema arabicum HOM05D001237 ORTHO05D009110 1.1e-98 363.6 225 78.2
MELO3C013804.2 Cucumis melo HOM05D001237 ORTHO05D009110 1.9e-98 362.8 237 77.2
A06p38920 Brassica napus HOM05D001237 ORTHO05D009110 3.2e-98 362.1 226 77.4
Thhalv10004626m.g Eutrema salsugineum HOM05D001237 ORTHO05D009110 5.4e-98 361.3 226 77.0
C07p39410 Brassica napus HOM05D001237 ORTHO05D009110 7.1e-98 360.9 226 77.9
BraA06t26806Z Brassica rapa HOM05D001237 ORTHO05D009110 7.1e-98 360.9 226 77.0
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 1.3e-96 356.7 226 76.1
Lsat_1_v5_gn_6_17621 Lactuca sativa HOM05D001237 ORTHO05D009110 1.6e-94 349.7 224 77.2
BolC7t44460H Brassica oleracea HOM05D001237 ORTHO05D009110 8.1e-94 347.4 216 77.3
Dinv15842 Davidia involucrata HOM05D001237 ORTHO05D009110 6.8e-93 344.4 197 82.7
CDE02G0540 Ceratophyllum demersum HOM05D001237 ORTHO05D009110 1.2e-89 333.6 197 80.7
CARHR182950 Cardamine hirsuta HOM05D001237 ORTHO05D009110 2.1e-89 332.8 213 75.1
SGA_v2.0_scaffold111G31373 Striga asiatica HOM05D001237 ORTHO05D009110 2.7e-89 332.4 204 80.9
Sabra03G0068500 Salix brachista HOM05D001237 ORTHO05D009110 3.6e-86 322.0 238 70.6
HanXRQChr08g0226791 Helianthus annuus HOM05D001237 ORTHO05D009110 1.4e-85 320.1 185 82.7
BcaC06g30758 Brassica carinata HOM05D001237 ORTHO05D009110 3.4e-84 315.5 226 69.9
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 4.4e-84 315.1 224 66.5
unitig_747.g21357 Utricularia gibba HOM05D000467 ORTHO05D000379 1.3e-83 313.5 218 70.6
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 6.4e-83 311.2 226 64.6
ClCG10G001120 Citrullus lanatus HOM05D001237 ORTHO05D009110 7.3e-79 297.7 226 69.5
SMO356G0709 Selaginella moellendorffii HOM05D001237 ORTHO05D009110 1.0e-72 277.3 223 58.3
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 1.4e-69 266.9 216 58.8
arahy.Tifrunner.gnm1.ann1.3EKV6C Arachis hypogaea HOM05D001237 ORTHO05D009110 8.4e-67 257.7 166 78.9
arahy.Tifrunner.gnm1.ann1.YIEM7C Arachis hypogaea HOM05D001237 ORTHO05D009110 8.4e-67 257.7 166 78.9
CBR_g18855 Chara braunii HOM05D001237 ORTHO05D009110 5.5e-66 255.0 188 62.8
Glyma.09G212000 Glycine max HOM05D001237 ORTHO05D009110 2.8e-62 242.7 129 93.0
Hund11115 Selenicereus undatus HOM05D001237 ORTHO05D009110 1.5e-60 236.9 146 79.5
SEGI_12758 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 2.1e-57 226.5 136 77.9
RcHm_v2.0_Chr7g0213121 Rosa chinensis HOM05D001237 ORTHO05D009110 7.6e-52 208.0 237 51.5
QL12p001026 Quercus lobata HOM05D001237 ORTHO05D009110 1.0e-48 197.6 112 85.7
Cre04.g212500 Chlamydomonas reinhardtii HOM05D001237 ORTHO05D009110 1.1e-42 177.6 246 43.1
PRCOL_00004822 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 5.7e-39 165.2 244 39.8
Sopen09g023280 Solanum pennellii HOM05D001237 ORTHO05D009110 1.4e-37 160.6 98 76.5
Lju2073A0T61 Lonicera japonica HOM05D001237 ORTHO05D009110 5.3e-37 158.7 113 71.7
MCO15G307 Micromonas commoda HOM05D001237 ORTHO05D009110 1.9e-34 150.2 249 34.9
Gohir.D08G172350 Gossypium hirsutum HOM05D001237 ORTHO05D009110 7.2e-34 148.3 80 86.2
HPP92_025933 Vanilla planifolia HOM05D001237 ORTHO05D009110 3.9e-32 142.5 89 76.4
PRCOL_00006184 Prasinoderma coloniale HOM05D001237 ORTHO05D009110 1.7e-19 100.5 245 28.6
MCO12G167 Micromonas commoda HOM05D001237 ORTHO05D009110 2.9e-19 99.8 251 27.1
Gohir.D08G172400 Gossypium hirsutum HOM05D001237 ORTHO05D009110 8.3e-14 81.6 48 83.3
SalBow1G6490 Salvia bowleyana HOM05D001237 ORTHO05D009110 5.0e-11 72.4 45 73.3
SEGI_16157 Sequoiadendron giganteum HOM05D001237 ORTHO05D009110 4.2e-10 69.3 48 68.8
Thecc.05G303200 Theobroma cacao HOM05D006315 ORTHO05D008052 7.5e-07 58.5 210 28.1
COL.COLO4_13471 Corchorus olitorius HOM05D006315 ORTHO05D008052 1.7e-06 57.4 210 27.6
FAN04G3094 Fragaria x ananassa HOM05D001237 ORTHO05D009110 1.7e-06 57.4 30 90.0
Duzib128G1131 Durio zibethinus HOM05D006315 ORTHO05D008052 2.8e-06 56.6 206 29.1
Aqoxy6G00442 Aquilegia oxysepala HOM05D006315 ORTHO05D008052 4.9e-06 55.8 210 28.1
TPR.G6112 Trifolium pratense HOM05D006315 ORTHO05D008052 4.9e-06 55.8 208 26.4
Phvul.007G180000 Phaseolus vulgaris HOM05D006315 ORTHO05D008052 6.3e-06 55.5 210 25.7
Dinv40287 Davidia involucrata HOM05D006315 ORTHO05D008052 8.3e-06 55.1 208 27.4


User provided reference genes

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