Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G093300 Glycine max HOM05D010135 ORTHO05D011377 1.1e-47 193.0 99 100.0
Glyma.10G144400 Glycine max HOM05D010135 ORTHO05D011377 5.2e-37 157.5 100 85.0
Phvul.007G204200 Phaseolus vulgaris HOM05D010135 ORTHO05D011377 5.9e-33 144.1 102 79.4
VMungo0720G3097 Vigna mungo HOM05D001037 ORTHO05D011377 3.0e-29 131.7 91 80.2
Lj5g0007613 Lotus japonicus HOM05D010135 ORTHO05D011377 1.2e-22 109.8 102 66.7
Lalb_Chr21g0310111 Lupinus albus HOM05D010135 ORTHO05D011377 4.4e-20 101.3 101 59.4
Prupe.6G306400 Prunus persica HOM05D010135 ORTHO05D011377 5.0e-16 87.8 101 54.5
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 2.5e-15 85.5 95 52.6
QL03p009441 Quercus lobata HOM05D010135 ORTHO05D011377 6.2e-14 80.9 92 55.4
QL93p2005_0018 Quercus lobata HOM05D010135 ORTHO05D011377 6.2e-14 80.9 92 55.4
Psat6g155320 Pisum sativum HOM05D029395 ORTHO05D011377 8.9e-13 77.0 103 52.4
Thecc.05G328000 Theobroma cacao HOM05D010135 ORTHO05D011377 2.6e-12 75.5 88 58.0
Haze_04005 Corylus avellana HOM05D010135 ORTHO05D011377 4.4e-12 74.7 107 51.4
MD12G1201300 Malus domestica HOM05D010135 ORTHO05D011377 2.9e-11 72.0 103 46.6
RcHm_v2.0_Chr3g0458221 Rosa chinensis HOM05D008705 ORTHO05D011377 1.4e-10 69.7 105 43.8
Sabra13G0003500 Salix brachista HOM05D010135 ORTHO05D011377 4.1e-10 68.2 89 49.4
Gohir.A13G177500 Gossypium hirsutum HOM05D010135 ORTHO05D011377 5.4e-10 67.8 97 49.5
Gohir.D13G184100 Gossypium hirsutum HOM05D010135 ORTHO05D011377 5.4e-10 67.8 97 49.5
Gorai.013G209400 Gossypium raimondii HOM05D010135 ORTHO05D011377 5.4e-10 67.8 97 49.5
Medtr1g084780 Medicago truncatula HOM05D029395 ORTHO05D011377 9.2e-10 67.0 89 48.3
Sabra05G0001400 Salix brachista HOM05D010135 ORTHO05D011377 1.2e-09 66.6 88 48.9
Sabra05G0015500 Salix brachista HOM05D010135 ORTHO05D011377 1.2e-09 66.6 88 48.9
Dinv24500 Davidia involucrata HOM05D001037 ORTHO05D000888 7.8e-09 63.9 88 48.9
Potri.013G004300 Populus trichocarpa HOM05D010135 ORTHO05D011377 7.8e-09 63.9 99 47.5
Potri.005G004800 Populus trichocarpa HOM05D010135 ORTHO05D011377 1.0e-08 63.5 88 45.5
Aqoxy2G02560 Aquilegia oxysepala HOM05D010135 ORTHO05D011377 3.0e-08 62.0 93 41.9
FAN09G1129 Fragaria x ananassa HOM05D008705 ORTHO05D000669 5.1e-08 61.2 91 46.2
FvH4_6g08340 Fragaria vesca HOM05D008705 ORTHO05D011377 8.6e-08 60.5 91 45.1
FAN14G0920 Fragaria x ananassa HOM05D008705 ORTHO05D011377 8.6e-08 60.5 91 45.1
Ca_10192_v3 Cicer arietinum L. HOM05D029395 ORTHO05D011377 1.9e-07 59.3 104 51.0
GSVIVG01031312001 Vitis vinifera HOM05D000039 ORTHO05D000815 6.2e-06 54.3 87 46.0


User provided reference genes

Program Settings