Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Glyma.20G018500 Glycine max HOM05D005618 ORTHO05D007278 1.2e-115 419.9 216 100.0
Glyma.07G220200 Glycine max HOM05D005618 ORTHO05D007278 7.4e-105 384.0 220 90.9
Phvul.002G096900 Phaseolus vulgaris HOM05D005618 ORTHO05D007278 1.3e-101 373.2 219 87.2
VMungo0251G3758 Vigna mungo HOM05D005618 ORTHO05D007278 1.1e-100 370.2 219 86.8
Ca_18751_v3 Cicer arietinum L. HOM05D005618 ORTHO05D007278 1.3e-96 356.7 220 80.9
TPR.G38285 Trifolium pratense HOM05D005618 ORTHO05D007278 1.8e-95 352.8 220 82.3
arahy.Tifrunner.gnm1.ann1.LME4NB Arachis hypogaea HOM05D005618 ORTHO05D007278 1.2e-94 350.1 219 79.5
arahy.Tifrunner.gnm1.ann1.R3FQ90 Arachis hypogaea HOM05D005618 ORTHO05D007278 2.7e-94 349.0 219 79.5
Lalb_Chr09g0328651 Lupinus albus HOM05D005618 ORTHO05D007278 2.7e-94 349.0 216 81.9
Lj4g0005080 Lotus japonicus HOM05D005618 ORTHO05D007278 7.7e-94 347.4 219 80.4
Lalb_Chr05g0219641 Lupinus albus HOM05D005618 ORTHO05D007278 2.9e-93 345.5 220 78.6
Psat7g130040 Pisum sativum HOM05D005618 ORTHO05D007278 4.0e-90 335.1 217 79.3
HanXRQChr15g0480861 Helianthus annuus HOM05D005618 ORTHO05D007278 8.8e-90 334.0 219 75.3
Thecc.06G150300 Theobroma cacao HOM05D005618 ORTHO05D007278 4.4e-89 331.6 225 75.6
Duzib235G0110 Durio zibethinus HOM05D005618 ORTHO05D007278 2.2e-88 329.3 225 75.6
COL.COLO4_31069 Corchorus olitorius HOM05D005618 ORTHO05D007278 1.8e-87 326.2 219 74.0
Gohir.A10G041000 Gossypium hirsutum HOM05D005618 ORTHO05D007278 7.0e-87 324.3 223 72.6
Duzib192G0044 Durio zibethinus HOM05D005618 ORTHO05D007278 1.2e-86 323.6 223 73.5
CiPaw.09G123100 Carya illinoinensis HOM05D005618 ORTHO05D007278 2.7e-86 322.4 217 73.3
Dinv32254 Davidia involucrata HOM05D005618 ORTHO05D007278 2.7e-86 322.4 217 75.1
CiPaw.10G091700 Carya illinoinensis HOM05D005618 ORTHO05D007278 7.7e-86 320.9 217 73.3
Gohir.D10G041800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 1.0e-85 320.5 223 72.2
Lsat_1_v5_gn_7_28281 Lactuca sativa HOM05D005618 ORTHO05D007278 1.3e-85 320.1 215 74.0
PGSC0003DMG400012093 Solanum tuberosum HOM05D005618 ORTHO05D007278 1.7e-85 319.7 216 73.1
Hma1.2p1_0053F.1_g030930 Hydrangea macrophylla HOM05D005618 ORTHO05D007278 6.5e-85 317.8 221 74.2
Solyc08g016670.3 Solanum lycopersicum HOM05D005618 ORTHO05D007278 6.5e-85 317.8 216 72.2
MSTRG.7487 Avicennia marina HOM05D005618 ORTHO05D007278 1.1e-84 317.0 221 71.0
Manes.15G121800 Manihot esculenta HOM05D005618 ORTHO05D007278 2.5e-84 315.8 220 70.5
Gorai.011G044400 Gossypium raimondii HOM05D005618 ORTHO05D007278 3.2e-84 315.5 226 72.1
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 4.2e-84 315.1 218 70.6
Gohir.A05G148300 Gossypium hirsutum HOM05D005618 ORTHO05D007278 4.2e-84 315.1 226 70.8
Sopen08g007080 Solanum pennellii HOM05D005618 ORTHO05D007278 4.2e-84 315.1 216 71.8
Potri.011G085100 Populus trichocarpa HOM05D005618 ORTHO05D007278 5.5e-84 314.7 222 71.2
PGR083G1302 Punica granatum HOM05D005618 ORTHO05D007278 9.4e-84 313.9 216 72.2
Cc00_g08440 Coffea canephora HOM05D005618 ORTHO05D007278 1.2e-83 313.5 219 71.7
FAN11G3487 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.2e-83 313.5 217 70.5
FvH4_3g05510 Fragaria vesca HOM05D005618 ORTHO05D007278 1.6e-83 313.2 217 70.0
FAN16G1298 Fragaria x ananassa HOM05D005618 ORTHO05D007278 2.1e-83 312.8 217 70.5
MSTRG.16244 Avicennia marina HOM05D005618 ORTHO05D007278 2.7e-83 312.4 226 68.1
Nitab4.5_0006887g0020 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.7e-83 312.4 216 71.8
QL05p057939 Quercus lobata HOM05D005618 ORTHO05D007278 2.7e-83 312.4 218 70.2
Sabra11G0068900 Salix brachista HOM05D005618 ORTHO05D007278 2.7e-83 312.4 222 70.3
Cfa000939 Carpinus fangiana HOM05D005618 ORTHO05D007278 4.7e-83 311.6 248 65.7
Sabra11G0067000 Salix brachista HOM05D005618 ORTHO05D007278 6.1e-83 311.2 222 69.8
TWI53G0952 Tripterygium wilfordii HOM05D005618 ORTHO05D007278 6.1e-83 311.2 219 72.1
Sc17g0004900 Simmondsia chinensis HOM05D005618 ORTHO05D007278 8.0e-83 310.8 220 70.5
SGA_v2.0_scaffold1G00178 Striga asiatica HOM05D005618 ORTHO05D007278 1.0e-82 310.5 213 72.3
RcHm_v2.0_Chr5g0014231 Rosa chinensis HOM05D005618 ORTHO05D007278 1.4e-82 310.1 221 69.7
Manes.17G070300 Manihot esculenta HOM05D005618 ORTHO05D007278 1.8e-82 309.7 218 71.1
SGA_v2.0_scaffold333G48991 Striga asiatica HOM05D005618 ORTHO05D007278 1.8e-82 309.7 217 70.5
CDE02G0590 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 5.2e-82 308.1 220 70.5
CDE06G1306 Ceratophyllum demersum HOM05D005618 ORTHO05D007278 1.2e-81 307.0 219 68.5
Haze_05608 Corylus avellana HOM05D005618 ORTHO05D007278 1.2e-81 307.0 206 75.2
Eucgr.D00295 Eucalyptus grandis HOM05D005618 ORTHO05D007278 1.2e-81 307.0 219 71.7
FAN21G3768 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.2e-81 307.0 217 69.1
Gorai.009G154900 Gossypium raimondii HOM05D005618 ORTHO05D007278 1.2e-81 307.0 226 69.5
Migut.M00907 Erythranthe guttata HOM05D005618 ORTHO05D007278 1.5e-81 306.6 218 69.3
CANSAT35G0334 Cannabis sativa HOM05D005618 ORTHO05D007278 2.6e-81 305.8 217 67.3
Nn4g26571 Nelumbo nucifera HOM05D005618 ORTHO05D007278 2.6e-81 305.8 217 71.0
Peaxi162Scf01211g00117 Petunia axillaris HOM05D005618 ORTHO05D007278 4.4e-81 305.1 262 61.5
CAN.G50.16 Capsicum annuum HOM05D005618 ORTHO05D007278 7.5e-81 304.3 215 70.7
Gohir.D05G150800 Gossypium hirsutum HOM05D005618 ORTHO05D007278 7.5e-81 304.3 229 67.2
ECA236G2996 Erigeron canadensis HOM05D005618 ORTHO05D007278 9.8e-81 303.9 227 69.2
Oeu034148.1 Olea europaea HOM05D005618 ORTHO05D007278 1.7e-80 303.1 225 66.2
SalBow8G3565 Salvia bowleyana HOM05D005618 ORTHO05D007278 2.2e-80 302.8 227 67.0
TAR624G0623 Trochodendron aralioides HOM05D005618 ORTHO05D007278 2.2e-80 302.8 216 70.8
BcaB07g32606 Brassica carinata HOM05D005618 ORTHO05D007278 2.8e-80 302.4 219 67.1
Ciclev10016692m.g Citrus clementina HOM05D005618 ORTHO05D007278 1.1e-79 300.4 214 70.6
Oeu052366.1 Olea europaea HOM05D005618 ORTHO05D007278 1.1e-79 300.4 235 63.8
GSVIVG01021471001 Vitis vinifera HOM05D005618 ORTHO05D007278 1.1e-79 300.4 219 69.9
ClCG03G006840 Citrullus lanatus HOM05D005618 ORTHO05D007278 5.4e-79 298.1 218 69.7
AT1G30070 Arabidopsis thaliana HOM05D005618 ORTHO05D007278 7.0e-79 297.7 219 66.2
THA.LOC104814300 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 7.0e-79 297.7 215 67.0
DCAR_003916 Daucus carota HOM05D005618 ORTHO05D007278 9.2e-79 297.4 217 65.9
Sed0020286 Sechium edule HOM05D005618 ORTHO05D007278 9.2e-79 297.4 220 70.0
Hund21546 Selenicereus undatus HOM05D005618 ORTHO05D007278 1.2e-78 297.0 216 67.1
TAR626G0061 Trochodendron aralioides HOM05D005618 ORTHO05D007278 1.2e-78 297.0 219 69.9
BcaC05g27023 Brassica carinata HOM05D005618 ORTHO05D007278 2.0e-78 296.2 219 65.8
C05p28860 Brassica napus HOM05D005618 ORTHO05D007278 2.0e-78 296.2 219 65.8
BolC5t31605H Brassica oleracea HOM05D005618 ORTHO05D007278 2.0e-78 296.2 219 65.8
CsaV3_1G032420 Cucumis sativus L. HOM05D005618 ORTHO05D007278 2.7e-78 295.8 217 67.3
Thhalv10008455m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 2.7e-78 295.8 218 66.1
AL1G43960 Arabidopsis lyrata HOM05D005618 ORTHO05D007278 4.5e-78 295.0 219 66.2
Lj2A305G54 Lonicera japonica HOM05D005618 ORTHO05D007278 1.0e-77 293.9 217 66.4
A09p36460 Brassica napus HOM05D005618 ORTHO05D007278 2.9e-77 292.4 219 65.3
BraA09t39168Z Brassica rapa HOM05D005618 ORTHO05D007278 2.9e-77 292.4 219 65.3
THA.LOC104820649 Tarenaya hassleriana HOM05D005618 ORTHO05D007278 5.0e-77 291.6 215 67.0
ATR0730G012 Amborella trichopoda HOM05D005618 ORTHO05D007278 1.1e-76 290.4 214 66.4
Sp1g25930 Schrenkiella parvula HOM05D005618 ORTHO05D007278 1.9e-76 289.7 219 64.8
Carub.0001s2829 Capsella rubella HOM05D005618 ORTHO05D007278 1.2e-75 287.0 216 64.8
MELO3C002736.2 Cucumis melo HOM05D005618 ORTHO05D007278 1.2e-75 287.0 219 66.2
Medtr4g084250 Medicago truncatula HOM05D005618 ORTHO05D007278 6.1e-75 284.6 222 68.5
Aa31LG6G5600 Aethionema arabicum HOM05D005618 ORTHO05D007278 8.0e-75 284.3 229 61.6
Aqoxy1G01706 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 3.0e-74 282.3 225 64.0
CARHR029340 Cardamine hirsuta HOM05D005618 ORTHO05D007278 5.2e-74 281.6 217 62.7
PSO675G5881 Papaver somniferum HOM05D005618 ORTHO05D007278 6.8e-74 281.2 245 60.8
AUR62030187 Chenopodium quinoa HOM05D005618 ORTHO05D007278 8.9e-74 280.8 220 66.4
vmacro10962 Vaccinium macrocarpon HOM05D005618 ORTHO05D007278 1.5e-73 280.0 260 60.4
MD05G1283600 Malus domestica HOM05D005618 ORTHO05D007278 2.0e-73 279.6 211 67.8
AUR62002738 Chenopodium quinoa HOM05D005618 ORTHO05D007278 9.8e-73 277.3 220 65.5
HPP92_020290 Vanilla planifolia HOM05D005618 ORTHO05D007278 2.9e-72 275.8 213 63.8
Zm00001eb370650 Zea mays HOM05D005618 ORTHO05D007278 1.8e-71 273.1 218 61.9
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 5.4e-71 271.6 192 68.8
Nitab4.5_0000420g0030 Nicotiana tabacum HOM05D005618 ORTHO05D007278 2.7e-70 269.2 213 65.7
Os01g0757500 Oryza sativa ssp. japonica HOM05D005618 ORTHO05D007278 2.7e-70 269.2 218 60.6
Ah.09g232560 Amaranthus hybridus HOM05D005618 ORTHO05D007278 3.5e-70 268.9 252 57.1
CSS0012983 Camellia sinensis var. sinensis HOM05D005618 ORTHO05D007278 4.6e-70 268.5 161 78.9
SEGI_02039 Sequoiadendron giganteum HOM05D005618 ORTHO05D007278 4.6e-70 268.5 221 61.1
MBI10_g30420_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 5.9e-70 268.1 189 69.3
MD10G1261800 Malus domestica HOM05D005618 ORTHO05D007278 1.0e-69 267.3 211 64.9
Zm00001eb152680 Zea mays HOM05D005618 ORTHO05D007278 2.3e-69 266.2 214 60.7
Actinidia39574 Actinidia chinensis HOM05D005618 ORTHO05D007278 3.3e-68 262.3 161 77.0
Nn3g20783 Nelumbo nucifera HOM05D005618 ORTHO05D007278 6.4e-64 248.1 190 65.3
AUR62026670 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.2e-59 233.8 216 57.4
Rhsim02G0158200 Rhododendron simsii HOM05D005618 ORTHO05D007278 2.6e-57 226.1 192 63.0
Mapoly0148s0015 Marchantia polymorpha HOM05D005618 ORTHO05D007278 1.1e-55 220.7 232 49.1
Thhalv10002717m.g Eutrema salsugineum HOM05D005618 ORTHO05D007278 5.4e-55 218.4 130 74.6
unitig_32.g11444 Utricularia gibba HOM05D005618 ORTHO05D007278 3.5e-54 215.7 116 85.3
Pp3c4_13920 Physcomitrium patens HOM05D005618 ORTHO05D007278 6.0e-54 214.9 217 52.5
Cpa.g.c46789 Carica papaya HOM05D005618 ORTHO05D007278 2.5e-52 209.5 123 78.0
Actinidia07695 Actinidia chinensis HOM05D005618 ORTHO05D007278 1.2e-51 207.2 225 54.7
AagrBONN_evm.TU.Sc2ySwM_344.1819 Anthoceros agrestis HOM05D005618 ORTHO05D007278 1.8e-50 203.4 248 47.6
SMO364G0114 Selaginella moellendorffii HOM05D005618 ORTHO05D007278 3.4e-49 199.1 203 52.7
Prupe.4G081000 Prunus persica HOM05D005618 ORTHO05D007278 7.8e-46 188.0 247 43.3
MBI16_g34289_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 2.3e-37 159.8 100 74.0
AUR62040575 Chenopodium quinoa HOM05D005618 ORTHO05D007278 1.1e-36 157.5 169 50.3
SHI24907 Sapria himalayana HOM05D005618 ORTHO05D007278 9.6e-36 154.5 182 48.9
CBR_g22260 Chara braunii HOM05D005618 ORTHO05D007278 2.1e-35 153.3 251 37.1
PSO541G3455 Papaver somniferum HOM05D005618 ORTHO05D007278 6.9e-26 121.7 248 36.3
MBI18_g05573_MAGBIO Magnolia biondii HOM05D005618 ORTHO05D007278 7.9e-14 81.6 43 86.0
SHI24908 Sapria himalayana HOM05D005618 ORTHO05D007278 6.7e-13 78.6 82 52.4
SMO353G0169 Selaginella moellendorffii HOM05D005618 ORTHO05D001361 2.6e-09 66.6 65 53.8
Aqoxy7G01552 Aquilegia oxysepala HOM05D005618 ORTHO05D007278 5.9e-09 65.5 38 73.7
SMO364G0864 Selaginella moellendorffii HOM05D005618 ORTHO05D374196 1.0e-08 64.7 210 29.5
MBI18_g05572_MAGBIO Magnolia biondii HOM05D004967 ORTHO05D006146 3.8e-08 62.8 43 65.1
Cpa.g.sc246.8 Carica papaya HOM05D005618 ORTHO05D118306 3.6e-06 56.2 42 69.0


User provided reference genes

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